DrLLPS - Data resource of LLPS

LLPS-Via-0572
LR48_Vigan03g230200

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Signal recognition particle 9 kDa protein
Gene Name:	LR48_Vigan03g230200
Ensembl Gene:	LR48_Vigan03g230200
Ensembl Protein:	KOM38920
Organism:	Vigna angularis
Taxa ID:	3914
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Nucleolus, Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Homo sapiens	LLPS-Hos-0197	P49458	Regulator	Nucleolus, Stress granule	47.06	7e-16	72.0
Mus musculus	LLPS-Mum-0020	P49962	Client	Nuclear speckle, Nucleolus	45.59	9e-16	71.6

▼ FUNCTION

Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	KOM38920	KOM38920
UniProt		A0A0L9U7W6, A0A0L9U7W6_PHAAN
GeneBank	CM003373	KOM38920.1
RefSeq	XM_017563603.1	XP_017419092.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MVYITEWDKF VEQSIQLFRA DPDSTRYVMK YRHCDGKLVL RVTDNRQCLK YKTDQAQEAK 60 61 KMEKLNNMFF ALLARGPDVD LSEVTGKEQM DAQPSKKGRG RKQ 103
Nucleotide CDS Sequence (FASTA)
1 ATGGTTTACA TAACTGAGTG GGACAAATTT GTGGAGCAAT CCATTCAGTT GTTTCGTGCT 60 61 GATCCTGACT CTACACGGTA TGTCATGAAG TACAGGCATT GTGATGGCAA GTTGGTACTT 120 121 AGGGTCACTG ATAACCGGCA GTGTCTAAAG TACAAGACAG ACCAAGCACA GGAGGCTAAG 180 181 AAGATGGAAA AACTGAACAA TATGTTCTTT GCTTTGTTGG CCCGTGGTCC TGATGTTGAT 240 241 CTATCAGAAG TCACTGGAAA AGAGCAAATG GATGCTCAAC CAAGCAAGAA AGGAAGAGGA 300 301 AGGAAGCAAT AA 312

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0963	Cytoplasm
KW-1185	Reference proteome
KW-0687	Ribonucleoprotein
KW-0694	RNA-binding
KW-0733	Signal recognition particle

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005786	Cellular Component	Signal recognition particle, endoplasmic reticulum targeting
GO:0008312	Molecular Function	7S RNA binding
GO:0045900	Biological Process	Negative regulation of translational elongation
GO:0006614	Biological Process	SRP-dependent cotranslational protein targeting to membrane

▼ KEGG

var:108329415

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Phv-0741	Phaseolus vulgaris	97.09	6e-71	213
LLPS-Glm-0318	Glycine max	95.15	1e-69	210
LLPS-Met-2002	Medicago truncatula	87.38	3e-64	196
LLPS-Art-2359	Arabidopsis thaliana	83.5	1e-62	192
LLPS-Mae-1186	Manihot esculenta	82.52	5e-62	191
LLPS-Arl-1690	Arabidopsis lyrata	82.52	2e-62	191
LLPS-Thc-1482	Theobroma cacao	82.52	6e-63	193
LLPS-Coc-0506	Corchorus capsularis	81.55	4e-62	191
LLPS-Bro-0793	Brassica oleracea	81.55	6e-61	188
LLPS-Pot-1827	Populus trichocarpa	81.55	1e-60	187
LLPS-Viv-1602	Vitis vinifera	81.55	4e-61	188
LLPS-Brr-0452	Brassica rapa	81.55	6e-61	188
LLPS-Brn-0514	Brassica napus	81.55	6e-61	188
LLPS-Cus-0298	Cucumis sativus	80.58	2e-60	186
LLPS-Prp-0365	Prunus persica	79.61	6e-60	185
LLPS-Gor-0521	Gossypium raimondii	79.61	1e-58	182
LLPS-Amt-0519	Amborella trichopoda	79.61	1e-58	182
LLPS-Dac-1324	Daucus carota	77.67	4e-57	178
LLPS-Brd-1517	Brachypodium distachyon	76.7	3e-56	176
LLPS-Sol-2057	Solanum lycopersicum	76.7	2e-56	177
LLPS-Sot-0921	Solanum tuberosum	76.19	2e-55	174
LLPS-Nia-0997	Nicotiana attenuata	75.73	1e-55	174
LLPS-Sob-0443	Sorghum bicolor	75.73	9e-57	177
LLPS-Tru-0003	Triticum urartu	74.76	9e-55	172
LLPS-Sei-1882	Setaria italica	74.76	7e-55	172
LLPS-Hov-0314	Hordeum vulgare	74.76	9e-55	172
LLPS-Tra-2792	Triticum aestivum	74.76	9e-55	172
LLPS-Mua-1822	Musa acuminata	73.79	4e-55	173
LLPS-Hea-0426	Helianthus annuus	73.79	7e-53	167
LLPS-Zem-1946	Zea mays	72.82	2e-53	169
LLPS-Org-1973	Oryza glaberrima	67.96	2e-50	161
LLPS-Orgl-0758	Oryza glumaepatula	67.96	2e-50	161
LLPS-Ori-1312	Oryza indica	67.96	2e-50	161
LLPS-Orp-1697	Oryza punctata	66.99	1e-49	159
LLPS-Orbr-0243	Oryza brachyantha	66.99	6e-50	160
LLPS-Lep-0945	Leersia perrieri	66.02	5e-44	145
LLPS-Php-1611	Physcomitrella patens	65.05	2e-44	148
LLPS-Orr-1523	Oryza rufipogon	62.5	2e-47	154
LLPS-Orb-0718	Oryza barthii	62.5	2e-46	155
LLPS-Orni-0605	Oryza nivara	62.5	2e-46	155
LLPS-Anp-1414	Anas platyrhynchos	51.72	3e-15	70.1
LLPS-Tut-1318	Tursiops truncatus	51.02	5e-11	58.5
LLPS-Scf-0456	Scleropages formosus	50.77	5e-17	75.1
LLPS-Leo-0040	Lepisosteus oculatus	50.75	7e-18	77.4
LLPS-Xim-1758	Xiphophorus maculatus	50.0	3e-20	83.6
LLPS-Ten-1057	Tetraodon nigroviridis	48.65	7e-19	80.1
LLPS-Orn-2936	Oreochromis niloticus	48.65	2e-19	81.6
LLPS-Gaa-2107	Gasterosteus aculeatus	48.65	5e-20	82.8
LLPS-Tar-2620	Takifugu rubripes	48.65	1e-18	79.3
LLPS-Asm-3601	Astyanax mexicanus	48.65	1e-19	81.6
LLPS-Icp-0933	Ictalurus punctatus	48.65	1e-19	81.6
LLPS-Cas-3159	Carlito syrichta	47.76	3e-16	72.8
LLPS-Dar-3091	Danio rerio	47.3	1e-18	79.3
LLPS-Scm-2925	Scophthalmus maximus	47.3	5e-19	80.1
LLPS-Poa-3080	Pongo abelii	47.06	9e-16	71.6
LLPS-Nol-0257	Nomascus leucogenys	47.06	8e-16	72.0
LLPS-Pat-1480	Pan troglodytes	47.06	8e-16	72.0
LLPS-Pap-1934	Pan paniscus	47.06	8e-16	72.0
LLPS-Hos-0197	Homo sapiens	47.06	8e-16	72.0
LLPS-Fud-3224	Fukomys damarensis	47.06	4e-16	72.8
LLPS-Gog-0000	Gorilla gorilla	47.06	8e-16	72.0
LLPS-Chr-1431	Chlamydomonas reinhardtii	46.67	2e-21	87.0
LLPS-Ora-1048	Ornithorhynchus anatinus	46.27	1e-15	71.2
LLPS-Mam-4678	Macaca mulatta	45.59	3e-15	70.5
LLPS-Caf-3717	Canis familiaris	45.59	1e-15	71.6
LLPS-Eqc-3345	Equus caballus	45.59	1e-15	71.6
LLPS-Cap-3683	Cavia porcellus	45.59	8e-16	72.0
LLPS-Ict-3808	Ictidomys tridecemlineatus	45.59	1e-15	71.6
LLPS-Man-3158	Macaca nemestrina	45.59	3e-15	70.5
LLPS-Loa-0600	Loxodonta africana	45.59	1e-15	71.6
LLPS-Urm-2013	Ursus maritimus	45.59	1e-15	71.6
LLPS-Fec-0645	Felis catus	45.59	2e-15	72.0
LLPS-Mod-2955	Monodelphis domestica	45.59	1e-15	71.2
LLPS-Orc-3255	Oryctolagus cuniculus	45.59	1e-15	71.6
LLPS-Rhb-0996	Rhinopithecus bieti	45.59	3e-15	70.5
LLPS-Otg-1426	Otolemur garnettii	45.59	1e-15	71.6
LLPS-Bot-0582	Bos taurus	45.59	1e-15	71.6
LLPS-Paa-0184	Papio anubis	45.59	3e-15	70.5
LLPS-Mal-2312	Mandrillus leucophaeus	45.59	3e-15	70.5
LLPS-Aim-0228	Ailuropoda melanoleuca	45.59	1e-15	71.6
LLPS-Myl-1204	Myotis lucifugus	45.59	1e-15	71.6
LLPS-Ran-2127	Rattus norvegicus	45.59	9e-16	71.6
LLPS-Sah-1497	Sarcophilus harrisii	45.59	1e-15	71.2
LLPS-Cea-3599	Cercocebus atys	45.59	3e-15	70.5
LLPS-Aon-2119	Aotus nancymaae	45.59	2e-15	70.9
LLPS-Sus-2585	Sus scrofa	45.59	1e-15	71.6
LLPS-Mea-2272	Mesocricetus auratus	45.59	9e-16	71.6
LLPS-Maf-0819	Macaca fascicularis	45.59	3e-15	70.5
LLPS-Mum-0020	Mus musculus	45.59	1e-15	71.6
LLPS-Caj-0529	Callithrix jacchus	45.59	2e-15	70.9
LLPS-Chc-1169	Chondrus crispus	45.24	4e-18	78.2
LLPS-Tag-1826	Taeniopygia guttata	45.21	7e-18	77.4
LLPS-Gaga-3637	Gallus gallus	45.21	1e-17	77.0
LLPS-Meg-2756	Meleagris gallopavo	45.21	1e-17	77.0
LLPS-Fia-1798	Ficedula albicollis	45.21	7e-18	77.4
LLPS-Lac-3301	Latimeria chalumnae	44.59	8e-17	74.7
LLPS-Pes-0548	Pelodiscus sinensis	44.59	2e-17	76.3
LLPS-Cae-0854	Caenorhabditis elegans	44.29	1e-16	73.9
LLPS-Ere-1011	Erinaceus europaeus	44.12	8e-13	63.9
LLPS-Anc-0321	Anolis carolinensis	43.24	5e-17	75.1
LLPS-Abg-1523	Absidia glauca	43.08	4e-12	62.8
LLPS-Miv-0941	Microbotryum violaceum	42.42	2e-12	63.9
LLPS-Mel-0303	Melampsora laricipopulina	39.39	6e-12	61.2
LLPS-Gas-0781	Galdieria sulphuraria	38.03	5e-12	61.6
LLPS-Pug-0546	Puccinia graminis	37.36	6e-14	67.8
LLPS-Crn-0194	Cryptococcus neoformans	36.36	2e-09	55.5
LLPS-Usm-0653	Ustilago maydis	35.14	1e-10	59.3
LLPS-Drm-1404	Drosophila melanogaster	32.43	5e-11	58.9

LLPS-Via-0572LR48_Vigan03g230200

Protein Sequence

Nucleotide Sequence

LLPS-Via-0572
LR48_Vigan03g230200