Solanum tuberosum      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 328 genes.  Reviewed (0 or Unreviewed (328

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Sot-0011
PGSC0003DMG400009358
M1AJP5
2
LLPS-Sot-0041
PGSC0003DMG400008644
M1AGH1
3
LLPS-Sot-0042
PGSC0003DMG400018386
M1BKK0
4
LLPS-Sot-0109
PGSC0003DMG400016969
M1BF30
5
LLPS-Sot-0154
PGSC0003DMG400024601
M1CAB9
6
LLPS-Sot-0202
PGSC0003DMG400015271
M1B8D3
7
LLPS-Sot-0227
PGSC0003DMG400021594
M1BY76
8
LLPS-Sot-0266
PGSC0003DMG400043544
M1DT41
9
LLPS-Sot-0329
PGSC0003DMG400001850
M0ZNS8
10
LLPS-Sot-0397
PGSC0003DMG400015440
M1B8Y9
11
LLPS-Sot-0602
PGSC0003DMG401024850
M1CBH1
12
LLPS-Sot-0635
PGSC0003DMG400022994
M1C3Y1
13
LLPS-Sot-0645
PGSC0003DMG400005192
M1A2N0
14
LLPS-Sot-0650
PGSC0003DMG400013679
M1B2H4
15
LLPS-Sot-0672
PGSC0003DMG400026475
M1CIE1
16
LLPS-Sot-0730
PGSC0003DMG400000162
M0ZGS9
17
LLPS-Sot-0761
PGSC0003DMG400009647
M1AKV0
18
LLPS-Sot-0789
PGSC0003DMG400011581
M1AU00
19
LLPS-Sot-0800
PGSC0003DMG400007599
M1ACD6
20
LLPS-Sot-0804
PGSC0003DMG400008855
M1AHA7
21
LLPS-Sot-0833
PGSC0003DMG402011882
M1AV34
22
LLPS-Sot-0925
PGSC0003DMG400002300
M0ZQK0
23
LLPS-Sot-0967
PGSC0003DMG400033685
M1D7F9
24
LLPS-Sot-1030
PGSC0003DMG400021002
M1BVW9
25
LLPS-Sot-1066
PGSC0003DMG400000138
M0ZGN8
26
LLPS-Sot-1071
PGSC0003DMG400011842
M1AUY9
27
LLPS-Sot-1122
PGSC0003DMG400031138
M1D2S8
28
LLPS-Sot-1144
PGSC0003DMG400006257
M1A6X9
29
LLPS-Sot-1151
PGSC0003DMG400023424
M1C5E6
30
LLPS-Sot-1156
PGSC0003DMG400023337
M1C504
31
LLPS-Sot-1178
PGSC0003DMG401005658
M1A470
32
LLPS-Sot-1210
PGSC0003DMG401030070
M1CY68
33
LLPS-Sot-1226
PGSC0003DMG403019442
M1BPQ8
34
LLPS-Sot-1286
PGSC0003DMG401024581
M1CA87
35
LLPS-Sot-1324
PGSC0003DMG400022278
M1C0X8
36
LLPS-Sot-1327
PGSC0003DMG401006167
M1A6K1
37
LLPS-Sot-1335
PGSC0003DMG400021104
M1BW73
38
LLPS-Sot-1447
PGSC0003DMG400015413
M1B8W2
39
LLPS-Sot-1476
PGSC0003DMG400011332
M1ASV5
40
LLPS-Sot-1497
PGSC0003DMG400005889
M1A5E2
41
LLPS-Sot-1577
PGSC0003DMG400016968
M1BF29
42
LLPS-Sot-1613
PGSC0003DMG402016626
M1BDQ9
43
LLPS-Sot-1619
PGSC0003DMG400004047
M0ZXX3
44
LLPS-Sot-1640
PGSC0003DMG400018278
M1BK38
45
LLPS-Sot-1654
PGSC0003DMG400020717
M1BUX2
46
LLPS-Sot-1727
PGSC0003DMG400021550
M1BY04
47
LLPS-Sot-1789
PGSC0003DMG400001985
M0ZPC7
48
LLPS-Sot-1793
PGSC0003DMG400021927
M1BZF5
49
LLPS-Sot-1815
PGSC0003DMG400000190
M0ZGX0
50
LLPS-Sot-1843
PGSC0003DMG400012290
M1AWQ1
51
LLPS-Sot-1851
PGSC0003DMG400028599
M1CSC4
52
LLPS-Sot-1916
PGSC0003DMG400026716
M1CJD7
53
LLPS-Sot-1966
PGSC0003DMG400019504
M1BPY5
54
LLPS-Sot-1972
PGSC0003DMG401014249
M1B4K3
55
LLPS-Sot-2190
PGSC0003DMG400023706
M1C6R7
56
LLPS-Sot-2250
PGSC0003DMG400032494
M1D5S4
57
LLPS-Sot-2261
PGSC0003DMG402000497
M0ZIA0
58
LLPS-Sot-2285
PGSC0003DMG401005570
M1A3V0
59
LLPS-Sot-1646
PGSC0003DMG400006478
Q38JF9
102577585
60
LLPS-Sot-1908
PGSC0003DMG400024644
M1CAJ2
102577597
61
LLPS-Sot-0021
PGSC0003DMG400002675
Q2PYX3
102577667
62
LLPS-Sot-0788
PGSC0003DMG400002759
M0ZSI1
102577776
63
LLPS-Sot-1523
PGSC0003DMG400008285
Q3HRW8
102577837
64
LLPS-Sot-1678
PGSC0003DMG400016397
M1BCR3
102578214
65
LLPS-Sot-1609
PGSC0003DMG400038165
M1DGA9
102578288
66
LLPS-Sot-1702
PGSC0003DMG400031389
M1D3Q8
102578618
67
LLPS-Sot-0511
PGSC0003DMG400025509
M1CE99
102578630
68
LLPS-Sot-0601
PGSC0003DMG400001463
M0ZM74
102578685
69
LLPS-Sot-0632
PGSC0003DMG400024615
M1CAE9
102578746
70
LLPS-Sot-0897
PGSC0003DMG400027888
M1CP57
102579266
71
LLPS-Sot-0414
PGSC0003DMG400018735
M1BM43
102579301
72
LLPS-Sot-0904
PGSC0003DMG400027714
M1CNG1
102579457
73
LLPS-Sot-0821
PGSC0003DMG400015752
M1BAC1
102579515
74
LLPS-Sot-1413
PGSC0003DMG400005704
M1A4H1
102579587
75
LLPS-Sot-1220
PGSC0003DMG400000802
M0ZJL8
102579708
76
LLPS-Sot-1939
PGSC0003DMG400030476
M1CZU6
102579765
77
LLPS-Sot-0025
PGSC0003DMG400030386
K7XKP4
102580084
78
LLPS-Sot-1422
PGSC0003DMG400017207
M1BG00
102580093
79
LLPS-Sot-1334
PGSC0003DMG402000458
M0ZI38
102580187
80
LLPS-Sot-0764
PGSC0003DMG400003001
M0ZTH5
102580337
81
LLPS-Sot-0673
PGSC0003DMG400013186
M1B0G0
102580352
82
LLPS-Sot-1167
PGSC0003DMG400024715
M1CAU1
102580368
83
LLPS-Sot-0412
PGSC0003DMG400026983
M1CKD4
102580390
84
LLPS-Sot-2283
PGSC0003DMG400018437
M1BKS6
102580645
85
LLPS-Sot-1532
PGSC0003DMG402028588
M1CSB1
102580921
86
LLPS-Sot-0375
PGSC0003DMG400022854
M1C3D2
102580993
87
LLPS-Sot-0582
PGSC0003DMG400010461
M1AP79
102581137
88
LLPS-Sot-0078
PGSC0003DMG400012605
M1AY47
102581230
89
LLPS-Sot-0298
PGSC0003DMG400016264
M1BC78
102581317
90
LLPS-Sot-1826
PGSC0003DMG400010043
M1AMI4
102581565
91
LLPS-Sot-1588
PGSC0003DMG400011650
M1AU81
102581624
92
LLPS-Sot-0034
PGSC0003DMG400024838
M1CBF6
102581781
93
LLPS-Sot-1858
PGSC0003DMG400012771
M1AYU6
102582128
94
LLPS-Sot-0919
PGSC0003DMG400015180
M1B807
102582533
95
LLPS-Sot-0807
PGSC0003DMG401031045
M1D2B9
102582607
96
LLPS-Sot-0491
PGSC0003DMG400025722
M1CEZ1
102582636
97
LLPS-Sot-1375
PGSC0003DMG400028676
M1CSP7
102582645
98
LLPS-Sot-0354
PGSC0003DMG400000682
M0ZJ54
102582676
99
LLPS-Sot-1507
PGSC0003DMG400001759
Q38HT5
102582696
100
LLPS-Sot-0297
PGSC0003DMG400000286
M0ZQX8
102582763
101
LLPS-Sot-1211
PGSC0003DMG400026502
M1CII0
102582778
102
LLPS-Sot-1322
PGSC0003DMG400022038
M1BZS0
102582939
103
LLPS-Sot-0716
PGSC0003DMG400024719
M1CAU6
102582943
104
LLPS-Sot-0256
PGSC0003DMG402008350
M1AF93
102583160
105
LLPS-Sot-1637
PGSC0003DMG400007882
M1ADE6
102583208
106
LLPS-Sot-0152
PGSC0003DMG400008918
M1AHN6
102583474
107
LLPS-Sot-0949
PGSC0003DMG400001461
M0ZM69
102583564
108
LLPS-Sot-1991
PGSC0003DMG401012750
M1AYQ7
102583786
109
LLPS-Sot-1624
PGSC0003DMG400021163
M1BWH6
102583874
110
LLPS-Sot-0747
PGSC0003DMG400028104
M1CPW0
102583896
111
LLPS-Sot-0230
PGSC0003DMG400000344
M0ZHK4
102584094
112
LLPS-Sot-0839
PGSC0003DMG400008922
M1AHN9
102584130
113
LLPS-Sot-0733
PGSC0003DMG400028197
M1CQD2
102584212
114
LLPS-Sot-0873
PGSC0003DMG400024457
M1C9K8
102584608
115
LLPS-Sot-0517
PGSC0003DMG400000965
M0ZK92
102584651
116
LLPS-Sot-0192
PGSC0003DMG402016772
M1BEA0
102584723
117
LLPS-Sot-0474
PGSC0003DMG400030968
M1D202
102584896
118
LLPS-Sot-1115
PGSC0003DMG400009154
M1AIR8
102584898
119
LLPS-Sot-1126
PGSC0003DMG400007855
Q307Y8
102584982
120
LLPS-Sot-1961
PGSC0003DMG400027073
M1CKU0
102585254
121
LLPS-Sot-1313
PGSC0003DMG400030306
M1CZ19
102585273
122
LLPS-Sot-1154
PGSC0003DMG401030621
M1D0K0
102585307
123
LLPS-Sot-1451
PGSC0003DMG400008431
M1AFL5
102585349
124
LLPS-Sot-0901
PGSC0003DMG400024723
M1CAV1
102585572
125
LLPS-Sot-0985
PGSC0003DMG400032118
M1D518
102585736
126
LLPS-Sot-0916
PGSC0003DMG400025212
M1CD37
102585829
127
LLPS-Sot-1255
PGSC0003DMG400003629
M0ZWQ0
102585887
128
LLPS-Sot-0219
PGSC0003DMG400002541
M0ZRH4
102586017
129
LLPS-Sot-1229
PGSC0003DMG400027182
M1CLC1
102586073
130
LLPS-Sot-0479
PGSC0003DMG400028736
M1CSW4
102586113
131
LLPS-Sot-1650
PGSC0003DMG400005609
M1A3Z3
102586216
132
LLPS-Sot-1927
PGSC0003DMG400006428
M1A7N8
102586318
133
LLPS-Sot-1431
PGSC0003DMG400008551
M1AG30
102586340
134
LLPS-Sot-0665
PGSC0003DMG400017959
M1BIV6
102586461
135
LLPS-Sot-0017
PGSC0003DMG402009395
M1AJV5
102586490
136
LLPS-Sot-2207
PGSC0003DMG400030351
M1CZA2
102586500
137
LLPS-Sot-0300
PGSC0003DMG400022604
M1C2A0
102586640
138
LLPS-Sot-0893
PGSC0003DMG400034308
M1D7X3
102586958
139
LLPS-Sot-1260
PGSC0003DMG400028851
M1CTD9
102587123
140
LLPS-Sot-0621
PGSC0003DMG400014429
M1B5C0
102587179
141
LLPS-Sot-1917
PGSC0003DMG400011331
M1ASV4
102587230
142
LLPS-Sot-0456
PGSC0003DMG400023686
M1C6M2
102587394
143
LLPS-Sot-1197
PGSC0003DMG400013685
M1B2I1
102587439
144
LLPS-Sot-0284
PGSC0003DMG400027846
M1CNZ4
102587492
145
LLPS-Sot-2252
PGSC0003DMG400016281
M1BCA6
102587719
146
LLPS-Sot-1502
PGSC0003DMG400033575
M1D738
102588041
147
LLPS-Sot-1983
PGSC0003DMG400029694
M1CWL7
102588135
148
LLPS-Sot-0618
PGSC0003DMG400007950
M1ADM4
102588380
149
LLPS-Sot-0684
PGSC0003DMG400008371
M1AFD3
102588530
150
LLPS-Sot-1583
PGSC0003DMG400026068
M1CGM0
102588597
151
LLPS-Sot-1052
PGSC0003DMG400007564
M1CS43
102588605
152
LLPS-Sot-0276
PGSC0003DMG400030733
M1D118
102588627
153
LLPS-Sot-1770
PGSC0003DMG400019362
M1BPE7
102588693
154
LLPS-Sot-0235
PGSC0003DMG400030951
M1D1X2
102588847
155
LLPS-Sot-0506
PGSC0003DMG400024913
M1CBR7
102588907
156
LLPS-Sot-1550
PGSC0003DMG400013035
Q3HRZ3
102588930
157
LLPS-Sot-0174
PGSC0003DMG400012003
M1AVI1
102589113
158
LLPS-Sot-1350
PGSC0003DMG400009071
M1AIC3
102589129
159
LLPS-Sot-1326
PGSC0003DMG402004451
M0ZZG6
102589218
160
LLPS-Sot-1689
PGSC0003DMG400027416
M1CMB4
102589276
161
LLPS-Sot-0741
PGSC0003DMG400021209
M1BWN9
102589355
162
LLPS-Sot-0567
PGSC0003DMG400000128
M1A5A2
102589413
163
LLPS-Sot-1542
PGSC0003DMG401019187
M1BNM8
102589450
164
LLPS-Sot-0243
PGSC0003DMG400002190
M0ZQ54
102589508
165
LLPS-Sot-2069
PGSC0003DMG400024634
M1CAH7
102589752
166
LLPS-Sot-0538
PGSC0003DMG400020781
M1BV48
102589835
167
LLPS-Sot-1591
PGSC0003DMG400012333
M1AWX4
102589848
168
LLPS-Sot-0098
PGSC0003DMG400018094
M1CKW2
102589971
169
LLPS-Sot-1515
PGSC0003DMG402029739
M1CWU5
102590007
170
LLPS-Sot-1158
PGSC0003DMG400026283
M1CHJ6
102590452
171
LLPS-Sot-2033
PGSC0003DMG400019634
M1BQG1
102590967
172
LLPS-Sot-1250
PGSC0003DMG400012971
M1AZM2
102591082
173
LLPS-Sot-1395
PGSC0003DMG400018096
M1BJC0
102591201
174
LLPS-Sot-0487
PGSC0003DMG400003524
M0ZVJ6
102591288
175
LLPS-Sot-1580
PGSC0003DMG400016158
M1BBS3
102591574
176
LLPS-Sot-0009
PGSC0003DMG400000167
M0ZGT5
102591714
177
LLPS-Sot-0677
PGSC0003DMG400023908
M1C7H4
102591880
178
LLPS-Sot-0303
PGSC0003DMG400021851
M1BZ64
102591887
179
LLPS-Sot-1759
PGSC0003DMG400007573
M1ACA0
102591956
180
LLPS-Sot-0643
PGSC0003DMG400012334
M1AWX7
102591981
181
LLPS-Sot-0465
PGSC0003DMG400015862
M1BAR8
102592059
182
LLPS-Sot-0181
PGSC0003DMG400003725
M0ZWH0
102592073
183
LLPS-Sot-1141
PGSC0003DMG400002120
M0ZPV5
102592155
184
LLPS-Sot-0543
PGSC0003DMG400020230
M1BSV2
102592160
185
LLPS-Sot-0683
PGSC0003DMG400028132
M1CQ08
102592275
186
LLPS-Sot-0215
PGSC0003DMG400004422
Q3HVP1
102592440
187
LLPS-Sot-1626
PGSC0003DMG400014388
M1B547
102592473
188
LLPS-Sot-1305
PGSC0003DMG400005676
M1A4B3
102592520
189
LLPS-Sot-1616
PGSC0003DMG400019621
M1BQD5
102592648
190
LLPS-Sot-0932
PGSC0003DMG400009231
M1AJ32
102592807
191
LLPS-Sot-0110
PGSC0003DMG400008860
M1AHC0
102592855
192
LLPS-Sot-0316
PGSC0003DMG400029721
M1CWR0
102592899
193
LLPS-Sot-0837
PGSC0003DMG400003462
M0ZV95
102592919
194
LLPS-Sot-1519
PGSC0003DMG400026246
M1CHE3
102592957
195
LLPS-Sot-1814
PGSC0003DMG400006869
M1A9C1
102592995
196
LLPS-Sot-0959
PGSC0003DMG400010244
M1ANB6
102593090
197
LLPS-Sot-2211
PGSC0003DMG400014422
M1C146
102593150
198
LLPS-Sot-0378
PGSC0003DMG400018964
M1BMW6
102593560
199
LLPS-Sot-2165
PGSC0003DMG400015645
M1B9V2
102593613
200
LLPS-Sot-1662
PGSC0003DMG400020134
M1BSD7
102593694
201
LLPS-Sot-1008
PGSC0003DMG400022408
M1C1I6
102593887
202
LLPS-Sot-1684
PGSC0003DMG400019398
M1BPJ2
102593935
203
LLPS-Sot-1032
PGSC0003DMG400028012
M1CPK3
102593978
204
LLPS-Sot-0551
PGSC0003DMG400023103
M1C498
102593982
205
LLPS-Sot-0808
PGSC0003DMG400002860
K7WJW2
102594083
206
LLPS-Sot-0792
PGSC0003DMG400012714
M1AYM4
102594267
207
LLPS-Sot-0283
PGSC0003DMG400009978
M1AM61
102594288
208
LLPS-Sot-2080
PGSC0003DMG401029299
M1CUZ8
102594403
209
LLPS-Sot-0355
PGSC0003DMG400004723
M1A0M0
102594453
210
LLPS-Sot-0261
PGSC0003DMG401027528
M1CMQ8
102594773
211
LLPS-Sot-1340
PGSC0003DMG400018544
M1BLB0
102594892
212
LLPS-Sot-1565
PGSC0003DMG400007128
M1AAH1
102594986
213
LLPS-Sot-0269
PGSC0003DMG400027091
M1CKX6
102594990
214
LLPS-Sot-1936
PGSC0003DMG400033060
M1D6I8
102595020
215
LLPS-Sot-0028
PGSC0003DMG400020269
M1BT30
102595038
216
LLPS-Sot-1946
PGSC0003DMG400029797
M1CX42
102595089
217
LLPS-Sot-0217
PGSC0003DMG400029301
M1CV01
102595397
218
LLPS-Sot-1768
PGSC0003DMG400016798
M1BED0
102595428
219
LLPS-Sot-1439
PGSC0003DMG400002274
M0ZQH0
102595475
220
LLPS-Sot-0431
PGSC0003DMG402018223
M1BJV6
102595694
221
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