Scleropages formosus      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 600 genes.  Reviewed (0 or Unreviewed (600

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Scf-0061
ENSSFOG00015023156.1
2
LLPS-Scf-0274
ENSSFOG00015017238.1
3
LLPS-Scf-0307
ENSSFOG00015022340.1
4
LLPS-Scf-0687
ENSSFOG00015007867.1
5
LLPS-Scf-0793
ENSSFOG00015014176.1
6
LLPS-Scf-0867
ENSSFOG00015012980.1
7
LLPS-Scf-1008
ENSSFOG00015006425.1
8
LLPS-Scf-1098
ENSSFOG00015010641.1
9
LLPS-Scf-1205
ENSSFOG00015024188.1
10
LLPS-Scf-1331
ENSSFOG00015021206.1
11
LLPS-Scf-1365
ENSSFOG00015010536.1
12
LLPS-Scf-1468
ENSSFOG00015017111.1
13
LLPS-Scf-1495
ENSSFOG00015023739.1
14
LLPS-Scf-1702
ENSSFOG00015019089.1
15
LLPS-Scf-1714
ENSSFOG00015016228.1
16
LLPS-Scf-1723
ENSSFOG00015005572.1
17
LLPS-Scf-1757
ENSSFOG00015006662.1
18
LLPS-Scf-1921
ENSSFOG00015017408.1
19
LLPS-Scf-2047
ENSSFOG00015005578.1
20
LLPS-Scf-2410
ENSSFOG00015015002.1
21
LLPS-Scf-2633
ENSSFOG00015023350.1
22
LLPS-Scf-2648
ENSSFOG00015006123.1
23
LLPS-Scf-2667
ENSSFOG00015002350.1
24
LLPS-Scf-2731
ENSSFOG00015022422.1
25
LLPS-Scf-2867
ENSSFOG00015018053.1
26
LLPS-Scf-3980
ENSSFOG00015009986.1
27
LLPS-Scf-1225
ENSSFOG00015011897.1
A0A0P7YHJ2
AARS
28
LLPS-Scf-0397
ENSSFOG00015002318.1
A0A0P7UYC6
abt1
29
LLPS-Scf-2693
ENSSFOG00015021877.1
A0A0N8JWH1
aldoa
30
LLPS-Scf-1055
ENSSFOG00015021167.1
A0A0P7XLM0
anxa2
31
LLPS-Scf-2883
ENSSFOG00015001665.1
A0A0P7XXS9
arl1
32
LLPS-Scf-1988
ENSSFOG00015017779.1
A0A0P7TUL6
atp6v0e1
33
LLPS-Scf-1121
ENSSFOG00015016444.1
A0A0P7TZK0
atp6v1a
34
LLPS-Scf-3645
ENSSFOG00015011401.1
A0A0P7UZ22
bag3
35
LLPS-Scf-0343
ENSSFOG00015010596.1
A0A0P7UZP1
BOP1
36
LLPS-Scf-0046
ENSSFOG00015001500.1
A0A0N8JZD2
calm3
37
LLPS-Scf-0321
ENSSFOG00015011064.1
A0A0P7VHL6
cdk1
38
LLPS-Scf-2579
ENSSFOG00015002117.1
A0A0P7U144
cpsf2
39
LLPS-Scf-0973
ENSSFOG00015016772.1
A0A0P7V3A7
csnk2b
40
LLPS-Scf-1873
ENSSFOG00015011410.1
A0A0P7V387
dbr1
41
LLPS-Scf-0964
ENSSFOG00015006358.1
A0A0P7UDV4
EIF3A
42
LLPS-Scf-0405
ENSSFOG00015021823.1
A0A0P7V5R1
EIF3C
43
LLPS-Scf-2756
ENSSFOG00015009647.1
A0A0P7V782
EIF3E
44
LLPS-Scf-0020
ENSSFOG00015023723.1
A0A0P7UFJ6
EIF3G
45
LLPS-Scf-2430
ENSSFOG00015023588.1
A0A0P7UFG8
eif3i
46
LLPS-Scf-0107
ENSSFOG00015014173.1
A0A0P7XFR4
eif5
47
LLPS-Scf-0269
ENSSFOG00015004090.1
A0A0P7USX7
EIF6
48
LLPS-Scf-3454
ENSSFOG00015009632.1
A0A0P7VKF1
erp44
49
LLPS-Scf-2853
ENSSFOG00015012410.1
A0A0P7WCX3
FEN1
50
LLPS-Scf-3190
ENSSFOG00015019706.1
A0A0P7V4A3
gipc1
51
LLPS-Scf-1120
ENSSFOG00015020926.1
A0A0N8K0R7
gmppb
52
LLPS-Scf-1596
ENSSFOG00015019010.1
A0A0P7X8P7
gper1
53
LLPS-Scf-3002
ENSSFOG00015021468.1
A0A0P7UKC2
gss
54
LLPS-Scf-3612
ENSSFOG00015000609.1
A0A0P7VTQ8
jmjd6
55
LLPS-Scf-3156
ENSSFOG00015003935.1
A0A0P7ZET3
LOC108918713
56
LLPS-Scf-1152
ENSSFOG00015014337.1
A0A0P7XM50
LOC108918941
57
LLPS-Scf-2705
ENSSFOG00015002672.1
A0A0P7WSQ5
LOC108920901
58
LLPS-Scf-2788
ENSSFOG00015004769.1
A0A0P7VJ00
LOC108921270
59
LLPS-Scf-0188
ENSSFOG00015022765.1
A0A0P7U5A1
LOC108921738
60
LLPS-Scf-3360
ENSSFOG00015006454.1
A0A0P7VZ68
LOC108922335
61
LLPS-Scf-0484
ENSSFOG00015005824.1
A0A0P7YAR6
LOC108922498
62
LLPS-Scf-2117
ENSSFOG00015016485.1
A0A0P7WWA6
LOC108922723
63
LLPS-Scf-0666
ENSSFOG00015010638.1
A0A0P7V491
LOC108923036
64
LLPS-Scf-0752
ENSSFOG00015017841.1
A0A0P7U4F0
LOC108923923
65
LLPS-Scf-1694
ENSSFOG00015004257.1
A0A0P7UMA2
LOC108925478
66
LLPS-Scf-3964
ENSSFOG00015016684.1
A0A0N8JYE6
LOC108925605
67
LLPS-Scf-1096
ENSSFOG00015000951.1
A0A0P7UUX5
LOC108925902
68
LLPS-Scf-3415
ENSSFOG00015023903.1
A0A0P7UVX6
LOC108926679
69
LLPS-Scf-3378
ENSSFOG00015011140.1
A0A0N8JYI1
LOC108927106
70
LLPS-Scf-0095
ENSSFOG00015014856.1
A0A0P7XGI4
LOC108927192
71
LLPS-Scf-0782
ENSSFOG00015003498.1
A0A0P7U6X7
LOC108929789
72
LLPS-Scf-0102
ENSSFOG00015014718.1
A0A0P7XA38
LOC108930093
73
LLPS-Scf-0051
ENSSFOG00015022654.1
A0A0P7V1M7
LOC108930161
74
LLPS-Scf-0080
ENSSFOG00015013231.1
A0A0P7UUA6
LOC108930456
75
LLPS-Scf-3352
ENSSFOG00015001419.1
A0A0P7TRW8
LOC108930823
76
LLPS-Scf-4089
ENSSFOG00015002928.1
A0A0P7U8V1
LOC108932657
77
LLPS-Scf-0426
ENSSFOG00015019348.1
A0A0P7WRR1
LOC108932988
78
LLPS-Scf-0218
ENSSFOG00015006929.1
A0A0P7UFD9
LOC108934054
79
LLPS-Scf-1191
ENSSFOG00015011369.1
A0A0P7WFQ2
LOC108934428
80
LLPS-Scf-0992
ENSSFOG00015022407.1
A0A0P7YBB5
LOC108935435
81
LLPS-Scf-0904
ENSSFOG00015001456.1
A0A0P7U7M6
LOC108935938
82
LLPS-Scf-0489
ENSSFOG00015015133.1
A0A0P7VPZ3
LOC108936867
83
LLPS-Scf-2177
ENSSFOG00015005088.1
A0A0P7V5C4
LOC108938306
84
LLPS-Scf-2821
ENSSFOG00015003355.1
A0A0P7XPJ5
LOC108939306
85
LLPS-Scf-1568
ENSSFOG00015005727.1
A0A0P7X7U8
LOC108940629
86
LLPS-Scf-2873
ENSSFOG00015022253.1
A0A0P7UTU5
LOC108942501
87
LLPS-Scf-1798
ENSSFOG00015019954.1
A0A0P7T697
lsm10
88
LLPS-Scf-0244
ENSSFOG00015007003.1
A0A0P7ZCZ0
mcm2
89
LLPS-Scf-1283
ENSSFOG00015000141.1
A0A0P7V3S9
MCM7
90
LLPS-Scf-0791
ENSSFOG00015007940.1
A0A0P7YFT1
MED6
91
LLPS-Scf-1279
ENSSFOG00015023030.1
A0A0P7UM17
mpg
92
LLPS-Scf-2340
ENSSFOG00015008464.1
A0A0P7VFX9
naxe
93
LLPS-Scf-0663
ENSSFOG00015014972.1
A0A0N8K2L5
ncbp2
94
LLPS-Scf-1123
ENSSFOG00015022487.1
A0A0N8JZ88
nop10
95
LLPS-Scf-3007
ENSSFOG00015008116.1
A0A0P7X341
pdcd4
96
LLPS-Scf-0745
ENSSFOG00015014209.1
A0A0P7XDI7
pfdn5
97
LLPS-Scf-3327
ENSSFOG00015005538.1
A0A0P7ULV6
pou3f2
98
LLPS-Scf-3721
ENSSFOG00015013606.1
A0A0P7VDV5
ppp2r5e
99
LLPS-Scf-0036
ENSSFOG00015022118.1
A0A0P7VTY3
prpf18
100
LLPS-Scf-1020
ENSSFOG00015020508.1
A0A0P7VK29
psma5
101
LLPS-Scf-2304
ENSSFOG00015017412.1
A0A0P7UG14
RNF168
102
LLPS-Scf-0201
ENSSFOG00015012326.1
A0A0N8JZN3
rpl32
103
LLPS-Scf-0410
ENSSFOG00015017146.1
A0A0P7X9F1
rps12
104
LLPS-Scf-0856
ENSSFOG00015019754.1
A0A0P7WNU2
rps19
105
LLPS-Scf-2473
ENSSFOG00015014811.1
A0A0P7UTC2
rps20
106
LLPS-Scf-2527
ENSSFOG00015015289.1
A0A0P7XBI9
sfrp2
107
LLPS-Scf-1570
ENSSFOG00015018122.1
A0A0P7WIB3
sigmar1
108
LLPS-Scf-1461
ENSSFOG00015023732.1
A0A0P7XIJ6
smpd3
109
LLPS-Scf-0885
ENSSFOG00015001305.1
A0A0P7UW28
snap25
110
LLPS-Scf-1187
ENSSFOG00015002870.1
A0A0P7XJH0
snrpb
111
LLPS-Scf-3881
ENSSFOG00015016273.1
A0A0P7ZA42
srp14
112
LLPS-Scf-0456
ENSSFOG00015000310.1
A0A0P7TJF3
srp9
113
LLPS-Scf-2820
ENSSFOG00015012880.1
A0A0P7Z789
tceb1
114
LLPS-Scf-1071
ENSSFOG00015018892.1
A0A0P7V194
ube2i
115
LLPS-Scf-3666
ENSSFOG00015013648.1
A0A0P7U347
usp5
116
LLPS-Scf-2525
ENSSFOG00015010563.1
A0A0P7W1H1
Z043_100038
117
LLPS-Scf-0383
ENSSFOG00015007217.1
A0A0P7ZH04
Z043_100047
118
LLPS-Scf-1289
ENSSFOG00015021904.1
A0A0P7ZGV4
Z043_100095
119
LLPS-Scf-2330
ENSSFOG00015015398.1
A0A0N8K3C6
Z043_100206
120
LLPS-Scf-0995
ENSSFOG00015022435.1
A0A0P7XXV8
Z043_100221
121
LLPS-Scf-1190
ENSSFOG00015014709.1
A0A0P7XSS6
Z043_100289
122
LLPS-Scf-1252
ENSSFOG00015019117.1
A0A0N8K3B2
Z043_100326
123
LLPS-Scf-2453
ENSSFOG00015002532.1
A0A0P7V164
Z043_100401
124
LLPS-Scf-3949
ENSSFOG00015015272.1
A0A0P7V121
Z043_100451
125
LLPS-Scf-0830
ENSSFOG00015012147.1
A0A0P7VBS0
Z043_100490
126
LLPS-Scf-0400
ENSSFOG00015014531.1
A0A0P7ZFP1
Z043_100513
127
LLPS-Scf-4095
ENSSFOG00015013580.1
A0A0P7VBN5
Z043_100540
128
LLPS-Scf-0070
ENSSFOG00015013904.1
A0A0P7XS82
Z043_100577
129
LLPS-Scf-2265
ENSSFOG00015014107.1
A0A0P7ZFH1
Z043_100582
130
LLPS-Scf-1635
ENSSFOG00015007442.1
A0A0P7VT34
Z043_100716
131
LLPS-Scf-0093
ENSSFOG00015021701.1
A0A0P7ZEX0
Z043_100776
132
LLPS-Scf-2965
ENSSFOG00015021925.1
A0A0N8K358
Z043_100792
133
LLPS-Scf-0440
ENSSFOG00015010692.1
A0A0P7VB36
Z043_100814
134
LLPS-Scf-1683
ENSSFOG00015017614.1
A0A0P7VZS2
Z043_100828
135
LLPS-Scf-1585
ENSSFOG00015001780.1
A0A0P7XRL9
Z043_100840
136
LLPS-Scf-3458
ENSSFOG00015001827.1
A0A0P7VZR6
Z043_100844
137
LLPS-Scf-0223
ENSSFOG00015008993.1
A0A0P7VSM6
Z043_100886
138
LLPS-Scf-3577
ENSSFOG00015015462.1
A0A0P7ZEI3
Z043_100935
139
LLPS-Scf-3420
ENSSFOG00015013692.1
A0A0P7XRC6
Z043_100968
140
LLPS-Scf-3109
ENSSFOG00015003631.1
A0A0P7UYN7
Z043_101067
141
LLPS-Scf-1701
ENSSFOG00015021253.1
A0A0P7VYW0
Z043_101165
142
LLPS-Scf-2463
ENSSFOG00015022442.1
A0A0P7XVA4
Z043_101201
143
LLPS-Scf-1784
ENSSFOG00015018194.1
A0A0P7VYM8
Z043_101262
144
LLPS-Scf-1398
ENSSFOG00015008064.1
A0A0P7VAR0
Z043_101334
145
LLPS-Scf-2636
ENSSFOG00015022795.1
A0A0P7VYB1
Z043_101401
146
LLPS-Scf-0573
ENSSFOG00015009044.1
A0A0P7V9Y2
Z043_101423
147
LLPS-Scf-2132
ENSSFOG00015010126.1
A0A0P7VY88
Z043_101433
148
LLPS-Scf-0866
ENSSFOG00015022751.1
A0A0P7XUK6
Z043_101500
149
LLPS-Scf-2038
ENSSFOG00015007640.1
A0A0P7V9M1
Z043_101539
150
LLPS-Scf-0542
ENSSFOG00015001103.1
A0A0P7VRB3
Z043_101553
151
LLPS-Scf-0712
ENSSFOG00015017733.1
A0A0P7ZCQ3
Z043_101714
152
LLPS-Scf-1256
ENSSFOG00015001137.1
A0A0P7VQZ2
Z043_101761
153
LLPS-Scf-1214
ENSSFOG00015006865.1
A0A0P7XPA9
Z043_101774
154
LLPS-Scf-0403
ENSSFOG00015002351.1
A0A0N8K2U3
Z043_101782
155
LLPS-Scf-0862
ENSSFOG00015019948.1
A0A0P7XTT7
Z043_101793
156
LLPS-Scf-1775
ENSSFOG00015000148.1
A0A0P7VX83
Z043_101805
157
LLPS-Scf-0415
ENSSFOG00015009861.1
A0A0P7V8Q8
Z043_101852
158
LLPS-Scf-0771
ENSSFOG00015001091.1
A0A0N8K2T2
Z043_101870
159
LLPS-Scf-1789
ENSSFOG00015011292.1
A0A0P7VWW8
Z043_101901
160
LLPS-Scf-3067
ENSSFOG00015011226.1
A0A0P7XP06
Z043_101917
161
LLPS-Scf-0548
ENSSFOG00015013348.1
A0A0P7ZC83
Z043_101949
162
LLPS-Scf-1903
ENSSFOG00015008103.1
A0A0P7V8I6
Z043_101992
163
LLPS-Scf-4113
ENSSFOG00015022705.1
A0A0P7UVM6
Z043_101996
164
LLPS-Scf-3685
ENSSFOG00015024085.1
A0A0P7VQH8
Z043_102048
165
LLPS-Scf-1021
ENSSFOG00015000650.1
A0A0P7V8E7
Z043_102055
166
LLPS-Scf-0071
ENSSFOG00015023058.1
A0A0P7ZBV4
Z043_102096
167
LLPS-Scf-0526
ENSSFOG00015009021.1
A0A0P7VQB1
Z043_102107
168
LLPS-Scf-2502
ENSSFOG00015004995.1
A0A0P7XSU1
Z043_102131
169
LLPS-Scf-1674
ENSSFOG00015003886.1
A0A0P7VW42
Z043_102155
170
LLPS-Scf-3507
ENSSFOG00015001866.1
A0A0P7XSN5
Z043_102159
171
LLPS-Scf-0472
ENSSFOG00015009878.1
A0A0P7XN82
Z043_102195
172
LLPS-Scf-1849
ENSSFOG00015021933.1
A0A0N8K2P1
Z043_102227
173
LLPS-Scf-2489
ENSSFOG00015014527.1
A0A0P7V7V8
Z043_102232
174
LLPS-Scf-3116
ENSSFOG00015003819.1
A0A0P7XMX7
Z043_102313
175
LLPS-Scf-1330
ENSSFOG00015015801.1
A0A0P7XMU7
Z043_102357
176
LLPS-Scf-3787
ENSSFOG00015021659.1
A0A0P7XS13
Z043_102366
177
LLPS-Scf-3266
ENSSFOG00015018873.1
A0A0P7VVF6
Z043_102418
178
LLPS-Scf-2101
ENSSFOG00015011900.1
A0A0P7VUQ5
Z043_102672
179
LLPS-Scf-2333
ENSSFOG00015019410.1
A0A0P7XQU6
Z043_102766
180
LLPS-Scf-2794
ENSSFOG00015014272.1
A0A0P7ZA25
Z043_102901
181
LLPS-Scf-3651
ENSSFOG00015014159.1
A0A0P7XLH0
Z043_102907
182
LLPS-Scf-1834
ENSSFOG00015014534.1
A0A0P7UT86
Z043_102943
183
LLPS-Scf-4183
ENSSFOG00015023868.1
A0A0P7UT78
Z043_102952
184
LLPS-Scf-2303
ENSSFOG00015008592.1
A0A0P7UT34
Z043_102994
185
LLPS-Scf-1253
ENSSFOG00015012930.1
A0A0N8K2E4
Z043_103067
186
LLPS-Scf-3059
ENSSFOG00015003609.1
A0A0P7XQ42
Z043_103099
187
LLPS-Scf-2669
ENSSFOG00015003519.1
A0A0P7USS9
Z043_103102
188
LLPS-Scf-0599
ENSSFOG00015003249.1
A0A0P7VTG2
Z043_103228
189
LLPS-Scf-1611
ENSSFOG00015005028.1
A0A0P7V5C1
Z043_103252
190
LLPS-Scf-4144
ENSSFOG00015006487.1
A0A0P7USB6
Z043_103261
191
LLPS-Scf-0423
ENSSFOG00015019860.1
A0A0P7XKE1
Z043_103270
192
LLPS-Scf-2724
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