Absidia glauca      Regulator


※ Regulator introduction

    The LLPS of scaffold proteins and the stability of MLOs can be modulated by PTMs and other proteins (1-4). For example, arginine methylation of FUS by PRMT1 or PRMT8 reduces the LLPS of FUS, and both PRMTs were classified as PTM regulators. Also, Buchan et al. conducted a microscopy-based genetic screen of >4000 gene deletions in Saccharomyces cerevisiae, and identified 125 genes to be involved in regulating the stability and formation of P-bodies and/or stress granules (5). None of these proteins have been characterized to undergo LLPS, and here we classified all the 125 proteins as MLO regulators.

References
1. Vernon, R.M. and Forman-Kay, J.D. (2019) First-generation predictors of biological protein phase separation. Current opinion in structural biology 58, 88-96. PMID: 31252218
2. Wang, Z. and Zhang, H. (2019) Phase Separation, Transition, and Autophagic Degradation of Proteins in Development and Pathogenesis. Trends in cell biology, 29, 417-427. PMID: 30826216
3. Alberti, S., Gladfelter, A. and Mittag, T. (2019) Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates. Cell, 176, 419-434. PMID: 30682370
4. Bergeron-Sandoval, L.P., Safaee, N. and Michnick, S.W. (2016) Mechanisms and Consequences of Macromolecular Phase Separation. Cell, 165, 1067-1079. PMID: 27203111
5. Buchan, J.R., Kolaitis, R.M., Taylor, J.P. and Parker, R. (2013) Eukaryotic stress granules are cleared by autophagy and Cdc48/VCP function. Cell, 176, 419-434. PMID: 23791177


There are 363 genes.  Reviewed (0 or Unreviewed (363

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Abg-1081
SAM02611
2
LLPS-Abg-0688
SAL94808
A0A163LNG3
ABSGL_00094.1 scaffold 163
3
LLPS-Abg-1680
SAL94834
A0A163IQH2
ABSGL_00124.1 scaffold 298
4
LLPS-Abg-0552
SAL94956
A0A168KM37
ABSGL_00250.1 scaffold 367
5
LLPS-Abg-0434
SAL95021
A0A168KN43
ABSGL_00318.1 scaffold 471
6
LLPS-Abg-1098
SAL95059
A0A163KNT3
ABSGL_00358.1 scaffold 492
7
LLPS-Abg-0167
SAL95065
A0A163ISF5
ABSGL_00364.1 scaffold 492
8
LLPS-Abg-0716
SAL95133
A0A168KPQ5
ABSGL_00434.1 scaffold 534
9
LLPS-Abg-1402
SAL95227
A0A168KR37
ABSGL_00545.1 scaffold 832
10
LLPS-Abg-1467
SAL95262
A0A163ITQ4
ABSGL_00580.1 scaffold 832
11
LLPS-Abg-0981
SAL95326
A0A168KSH4
ABSGL_00644.1 scaffold 832
12
LLPS-Abg-1443
SAL95341
A0A168KSN6
ABSGL_00659.1 scaffold 832
13
LLPS-Abg-0885
SAL95450
A0A163IUQ3
ABSGL_00779.1 scaffold 958
14
LLPS-Abg-1294
SAL95509
A0A163KQD2
ABSGL_00838.1 scaffold 958
15
LLPS-Abg-0913
SAL95579
A0A168KW70
ABSGL_00908.1 scaffold 958
16
LLPS-Abg-1033
SAL95642
A0A163IW89
ABSGL_00983.1 scaffold 1128
17
LLPS-Abg-0655
SAL95725
A0A163IWF5
ABSGL_01066.1 scaffold 1223
18
LLPS-Abg-1675
SAL95771
A0A168KZV1
ABSGL_01112.1 scaffold 1223
19
LLPS-Abg-0081
SAL95816
A0A168L0N6
ABSGL_01157.1 scaffold 1223
20
LLPS-Abg-1956
SAL95830
A0A168L0Z6
ABSGL_01171.1 scaffold 1223
21
LLPS-Abg-0924
SAL95863
A0A163IX99
ABSGL_01204.1 scaffold 1223
22
LLPS-Abg-1640
SAL95864
A0A163IX72
ABSGL_01205.1 scaffold 1223
23
LLPS-Abg-0135
SAL95994
A0A163IXU8
ABSGL_01335.1 scaffold 1223
24
LLPS-Abg-0212
SAL96084
A0A163IYD4
ABSGL_01452.1 scaffold 1580
25
LLPS-Abg-1834
SAL96091
A0A168L588
ABSGL_01459.1 scaffold 1580
26
LLPS-Abg-1627
SAL96121
A0A168L5T1
ABSGL_01489.1 scaffold 1580
27
LLPS-Abg-1337
SAL96235
A0A163IZD1
ABSGL_01617.1 scaffold 1863
28
LLPS-Abg-0520
SAL96312
A0A163IZQ4
ABSGL_01708.1 scaffold 2091
29
LLPS-Abg-0285
SAL96372
A0A163J024
ABSGL_01770.1 scaffold 2142
30
LLPS-Abg-0479
SAL96399
A0A168LAI7
ABSGL_01802.1 scaffold 2319
31
LLPS-Abg-1674
SAL96469
A0A168LBP7
ABSGL_01881.1 scaffold 2522
32
LLPS-Abg-0089
SAL96524
A0A163J0Y1
ABSGL_01940.1 scaffold 2596
33
LLPS-Abg-0144
SAL96633
A0A163J1M6
ABSGL_02049.1 scaffold 2596
34
LLPS-Abg-0969
SAL96636
A0A168LEM8
ABSGL_02052.1 scaffold 2596
35
LLPS-Abg-0056
SAL96641
A0A168LES9
ABSGL_02057.1 scaffold 2596
36
LLPS-Abg-0350
SAL96642
A0A163J1S8
ABSGL_02058.1 scaffold 2596
37
LLPS-Abg-0078
SAL96678
A0A163LU90
ABSGL_02094.1 scaffold 2596
38
LLPS-Abg-0237
SAL96791
A0A168LHG2
ABSGL_02215.1 scaffold 2846
39
LLPS-Abg-0407
SAL96887
A0A168LIX9
ABSGL_02337.1 scaffold 3364
40
LLPS-Abg-0462
SAL96893
A0A163J382
ABSGL_02343.1 scaffold 3364
41
LLPS-Abg-0890
SAL97048
A0A163LVE8
ABSGL_02506.1 scaffold 3452
42
LLPS-Abg-0020
SAL97081
A0A168LM57
ABSGL_02539.1 scaffold 3452
43
LLPS-Abg-1663
SAL97161
A0A168LNH7
ABSGL_02632.1 scaffold 3684
44
LLPS-Abg-0785
SAL97229
A0A168LPG8
ABSGL_02700.1 scaffold 3684
45
LLPS-Abg-0300
SAL97236
A0A168LPK0
ABSGL_02707.1 scaffold 3684
46
LLPS-Abg-1959
SAL97312
A0A163J5K0
ABSGL_02799.1 scaffold 3929
47
LLPS-Abg-1112
SAL97342
A0A163J5R5
ABSGL_02833.1 scaffold 4001
48
LLPS-Abg-0867
SAL97455
A0A163J6E4
ABSGL_02952.1 scaffold 4097
49
LLPS-Abg-0895
SAL97463
A0A163J6H2
ABSGL_02960.1 scaffold 4097
50
LLPS-Abg-0392
SAL97521
A0A168LUD9
ABSGL_03018.1 scaffold 4097
51
LLPS-Abg-1321
SAL97560
A0A168LV80
ABSGL_03058.1 scaffold 4127
52
LLPS-Abg-0970
SAL97570
A0A168LVF8
ABSGL_03068.1 scaffold 4127
53
LLPS-Abg-1050
SAL97607
A0A163USB9
ABSGL_03112.1 scaffold 4229
54
LLPS-Abg-1300
SAL97716
A0A168LYZ3
ABSGL_03224.1 scaffold 4278
55
LLPS-Abg-0579
SAL97731
A0A168LZF8
ABSGL_03239.1 scaffold 4278
56
LLPS-Abg-1103
SAL97793
A0A163J8S2
ABSGL_03309.1 scaffold 4426
57
LLPS-Abg-0755
SAL97794
A0A163J8U8
ABSGL_03310.1 scaffold 4426
58
LLPS-Abg-0371
SAL97813
A0A163J8W5
ABSGL_03329.1 scaffold 4426
59
LLPS-Abg-1832
SAL97883
A0A163J9F2
ABSGL_03410.1 scaffold 4609
60
LLPS-Abg-1133
SAL97895
A0A168M3I6
ABSGL_03422.1 scaffold 4609
61
LLPS-Abg-0567
SAL97945
A0A168M4P2
ABSGL_03472.1 scaffold 4609
62
LLPS-Abg-0763
SAL97949
A0A163KSC2
ABSGL_03476.1 scaffold 4609
63
LLPS-Abg-0088
SAL97971
A0A168M593
ABSGL_03498.1 scaffold 4609
64
LLPS-Abg-1820
SAL98006
A0A168M5X2
ABSGL_03533.1 scaffold 4609
65
LLPS-Abg-0914
SAL98057
A0A163V4I9
ABSGL_03584.1 scaffold 4609
66
LLPS-Abg-1165
SAL98175
A0A168M9P8
ABSGL_03702.1 scaffold 4609
67
LLPS-Abg-1252
SAL98413
A0A163JCE9
ABSGL_03942.1 scaffold 4693
68
LLPS-Abg-1906
SAL98433
A0A163JCK2
ABSGL_03970.1 scaffold 4782
69
LLPS-Abg-0321
SAL98498
A0A168MGZ3
ABSGL_04035.1 scaffold 4782
70
LLPS-Abg-1853
SAL98537
A0A168MHU5
ABSGL_04086.1 scaffold 5027
71
LLPS-Abg-1540
SAL98538
A0A168MHW1
ABSGL_04087.1 scaffold 5027
72
LLPS-Abg-0108
SAL98633
A0A163JDH0
ABSGL_04188.1 scaffold 5169
73
LLPS-Abg-0958
SAL98644
A0A163JDS3
ABSGL_04199.1 scaffold 5169
74
LLPS-Abg-0245
SAL98671
A0A168MJX7
ABSGL_04226.1 scaffold 5169
75
LLPS-Abg-0783
SAL98745
A0A163J8F6
ABSGL_04309.1 scaffold 5390
76
LLPS-Abg-0592
SAL98746
A0A168ML62
ABSGL_04310.1 scaffold 5390
77
LLPS-Abg-1205
SAL98773
A0A163JE70
ABSGL_04337.1 scaffold 5390
78
LLPS-Abg-1100
SAL98822
A0A163JEN2
ABSGL_04387.1 scaffold 5409
79
LLPS-Abg-1311
SAL98916
A0A168MP51
ABSGL_04487.1 scaffold 5475
80
LLPS-Abg-1214
SAL98941
A0A168MPM5
ABSGL_04512.1 scaffold 5475
81
LLPS-Abg-0505
SAL98973
A0A163JF21
ABSGL_04544.1 scaffold 5475
82
LLPS-Abg-1711
SAL98978
A0A168MQ96
ABSGL_04549.1 scaffold 5475
83
LLPS-Abg-0290
SAL99000
A0A163J1R3
ABSGL_04571.1 scaffold 5475
84
LLPS-Abg-1361
SAL99036
A0A168MR78
ABSGL_04607.1 scaffold 5475
85
LLPS-Abg-0091
SAL99127
A0A168MST3
ABSGL_04708.1 scaffold 5764
86
LLPS-Abg-0235
SAL99282
A0A163JH24
ABSGL_04883.1 scaffold 6065
87
LLPS-Abg-1348
SAL99335
A0A163JBD7
ABSGL_04944.1 scaffold 6254
88
LLPS-Abg-0772
SAL99341
A0A168MWA8
ABSGL_04950.1 scaffold 6254
89
LLPS-Abg-1124
SAL99378
A0A168MX76
ABSGL_04991.1 scaffold 6267
90
LLPS-Abg-1219
SAL99458
A0A168MYL5
ABSGL_05072.1 scaffold 6272
91
LLPS-Abg-0039
SAL99499
A0A168MZE6
ABSGL_05126.1 scaffold 6524
92
LLPS-Abg-0543
SAL99540
A0A163J589
ABSGL_05185.1 scaffold 6851
93
LLPS-Abg-0388
SAL99604
A0A163JIQ0
ABSGL_05249.1 scaffold 6884
94
LLPS-Abg-1035
SAL99637
A0A168N1S5
ABSGL_05282.1 scaffold 6884
95
LLPS-Abg-0875
SAM08955
A0A168N2W5
ABSGL_05344.1 scaffold 6959
96
LLPS-Abg-0669
SAL99700
A0A163J6C1
ABSGL_05345.1 scaffold 6959
97
LLPS-Abg-0607
SAL99709
A0A168N317
ABSGL_05354.1 scaffold 6959
98
LLPS-Abg-1030
SAL99736
A0A168N3K7
ABSGL_05381.1 scaffold 6959
99
LLPS-Abg-0591
SAL99763
A0A163JJB1
ABSGL_05409.1 scaffold 6965
100
LLPS-Abg-1201
SAL99837
A0A168N552
ABSGL_05491.1 scaffold 7169
101
LLPS-Abg-0745
SAL99861
A0A168N5J0
ABSGL_05515.1 scaffold 7169
102
LLPS-Abg-0896
SAL99874
A0A163JJV9
ABSGL_05528.1 scaffold 7169
103
LLPS-Abg-0601
SAL99898
A0A163LZR6
ABSGL_05552.1 scaffold 7179
104
LLPS-Abg-1735
SAL99902
A0A163JK39
ABSGL_05556.1 scaffold 7179
105
LLPS-Abg-0626
SAL99946
A0A168N723
ABSGL_05602.1 scaffold 7188
106
LLPS-Abg-1743
SAL99951
A0A168N761
ABSGL_05607.1 scaffold 7188
107
LLPS-Abg-0077
SAL99976
A0A168N7I8
ABSGL_05632.1 scaffold 7188
108
LLPS-Abg-0104
SAL99981
A0A168N7L4
ABSGL_05637.1 scaffold 7188
109
LLPS-Abg-1776
SAL99987
A0A168N7P5
ABSGL_05643.1 scaffold 7188
110
LLPS-Abg-1824
SAL99994
A0A163JKF5
ABSGL_05650.1 scaffold 7188
111
LLPS-Abg-1022
SAM00012
A0A163JKK1
ABSGL_05668.1 scaffold 7188
112
LLPS-Abg-1094
SAM00116
A0A168N9Y1
ABSGL_05791.1 scaffold 7482
113
LLPS-Abg-1004
SAM00126
A0A168NA66
ABSGL_05801.1 scaffold 7482
114
LLPS-Abg-0022
SAM00128
A0A163M0K5
ABSGL_05803.1 scaffold 7482
115
LLPS-Abg-0603
SAM00164
A0A163JLC0
ABSGL_05841.1 scaffold 7570
116
LLPS-Abg-0287
SAM00167
A0A168NAV0
ABSGL_05844.1 scaffold 7570
117
LLPS-Abg-1997
SAM00210
A0A163J9Q2
ABSGL_05887.1 scaffold 7570
118
LLPS-Abg-0494
SAM00253
A0A163JLQ9
ABSGL_05934.1 scaffold 7611
119
LLPS-Abg-0723
SAM00282
A0A163JLU3
ABSGL_05963.1 scaffold 7611
120
LLPS-Abg-1591
SAM00284
A0A163JLX1
ABSGL_05965.1 scaffold 7611
121
LLPS-Abg-0294
SAM00286
A0A168NCR0
ABSGL_05967.1 scaffold 7611
122
LLPS-Abg-0775
SAM00365
A0A168NE41
ABSGL_06046.1 scaffold 7611
123
LLPS-Abg-1254
SAM00420
A0A163JB62
ABSGL_06108.1 scaffold 7701
124
LLPS-Abg-1161
SAM00440
A0A163JBD3
ABSGL_06128.1 scaffold 7701
125
LLPS-Abg-0012
SAM00454
A0A163JMQ0
ABSGL_06142.1 scaffold 7701
126
LLPS-Abg-0190
SAM00482
A0A163JMX1
ABSGL_06170.1 scaffold 7705
127
LLPS-Abg-0999
SAM00514
A0A163JN41
ABSGL_06202.1 scaffold 7705
128
LLPS-Abg-0339
SAM00680
A0A163JD75
ABSGL_06396.1 scaffold 8296
129
LLPS-Abg-0798
SAM00697
A0A168NK73
ABSGL_06413.1 scaffold 8296
130
LLPS-Abg-1921
SAM00716
A0A168NKI7
ABSGL_06439.1 scaffold 8356
131
LLPS-Abg-1559
SAM00853
A0A163JPF6
ABSGL_06579.1 scaffold 8461
132
LLPS-Abg-0195
SAM00865
A0A163JT72
ABSGL_06591.1 scaffold 8461
133
LLPS-Abg-1526
SAM00894
A0A168NNI7
ABSGL_06620.1 scaffold 8461
134
LLPS-Abg-0693
SAM00939
A0A163M3K5
ABSGL_06675.1 scaffold 8661
135
LLPS-Abg-1683
SAM01001
A0A163JF51
ABSGL_06737.1 scaffold 8661
136
LLPS-Abg-0412
SAM01075
A0A168NRU4
ABSGL_06812.1 scaffold 8678
137
LLPS-Abg-1527
SAM01078
A0A168NRW0
ABSGL_06815.1 scaffold 8678
138
LLPS-Abg-0186
SAM01098
A0A168NS90
ABSGL_06835.1 scaffold 8678
139
LLPS-Abg-0330
SAM01121
A0A163JFX9
ABSGL_06858.1 scaffold 8678
140
LLPS-Abg-0742
SAM01142
A0A168NT21
ABSGL_06879.1 scaffold 8678
141
LLPS-Abg-0128
SAM01188
A0A168NTR9
ABSGL_06925.1 scaffold 8678
142
LLPS-Abg-1234
SAM01216
A0A163JGN4
ABSGL_06957.1 scaffold 8715
143
LLPS-Abg-1931
SAM01361
A0A163JHK9
ABSGL_07102.1 scaffold 8717
144
LLPS-Abg-1863
SAM01366
A0A163JHM3
ABSGL_07107.1 scaffold 8717
145
LLPS-Abg-0336
SAM01410
A0A163KY30
ABSGL_07151.1 scaffold 8717
146
LLPS-Abg-0038
SAM01415
A0A168NXW8
ABSGL_07156.1 scaffold 8717
147
LLPS-Abg-0446
SAM01422
A0A168NY25
ABSGL_07163.1 scaffold 8717
148
LLPS-Abg-0564
SAM01429
A0A163M5C5
ABSGL_07170.1 scaffold 8717
149
LLPS-Abg-1360
SAM01459
A0A163M5G1
ABSGL_07200.1 scaffold 8717
150
LLPS-Abg-1865
SAM01490
A0A163KYC4
ABSGL_07231.1 scaffold 8717
151
LLPS-Abg-1869
SAM01530
A0A168P021
ABSGL_07271.1 scaffold 8717
152
LLPS-Abg-0585
SAM01552
A0A168P0F0
ABSGL_07293.1 scaffold 8717
153
LLPS-Abg-1256
SAM01594
A0A163JP90
ABSGL_07335.1 scaffold 8717
154
LLPS-Abg-0058
SAM01617
A0A168P1T2
ABSGL_07360.1 scaffold 8789
155
LLPS-Abg-0743
SAM01664
A0A163JPK0
ABSGL_07407.1 scaffold 8789
156
LLPS-Abg-0957
SAM01719
A0A163M6D5
ABSGL_07468.1 scaffold 8890
157
LLPS-Abg-0480
SAM01729
A0A163M6F2
ABSGL_07478.1 scaffold 8890
158
LLPS-Abg-0379
SAM01740
A0A168P484
ABSGL_07489.1 scaffold 8890
159
LLPS-Abg-0847
SAM01742
A0A168P492
ABSGL_07491.1 scaffold 8890
160
LLPS-Abg-0495
SAM01969
A0A163M765
ABSGL_07724.1 scaffold 9091
161
LLPS-Abg-1819
SAM01999
A0A163M793
ABSGL_07754.1 scaffold 9091
162
LLPS-Abg-0968
SAM02018
A0A168P9V8
ABSGL_07775.1 scaffold 9133
163
LLPS-Abg-1531
SAM02030
A0A168PA51
ABSGL_07787.1 scaffold 9133
164
LLPS-Abg-0335
SAM02114
A0A163JRX3
ABSGL_07877.1 scaffold 9181
165
LLPS-Abg-1049
SAM02127
A0A168PC42
ABSGL_07890.1 scaffold 9181
166
LLPS-Abg-0156
SAM02136
A0A168PC94
ABSGL_07899.1 scaffold 9181
167
LLPS-Abg-1894
SAM02137
A0A168PCA5
ABSGL_07900.1 scaffold 9181
168
LLPS-Abg-1185
SAM02209
A0A163M817
ABSGL_07980.1 scaffold 9429
169
LLPS-Abg-1381
SAM02259
A0A163M888
ABSGL_08038.1 scaffold 9578
170
LLPS-Abg-1052
SAM02290
A0A168PFF3
ABSGL_08069.1 scaffold 9578
171
LLPS-Abg-0398
SAM02319
A0A163M8F7
ABSGL_08098.1 scaffold 9591
172
LLPS-Abg-0007
SAM02380
A0A168PH61
ABSGL_08159.1 scaffold 9591
173
LLPS-Abg-1535
SAM02446
A0A168PIC9
ABSGL_08239.1 scaffold 9741
174
LLPS-Abg-0357
SAM02466
A0A168PIP7
ABSGL_08259.1 scaffold 9741
175
LLPS-Abg-0756
SAM02501
A0A163JQG7
ABSGL_08294.1 scaffold 9741
176
LLPS-Abg-0566
SAM02537
A0A168PK56
ABSGL_08338.1 scaffold 10076
177
LLPS-Abg-1232
SAM02568
A0A168PKW6
ABSGL_08369.1 scaffold 10076
178
LLPS-Abg-1065
SAM02572
A0A163TAK7
ABSGL_08373.1 scaffold 10076
179
LLPS-Abg-0770
SAM02700
A0A163KZ48
ABSGL_08516.1 scaffold 10403
180
LLPS-Abg-0238
SAM02717
A0A168PP58
ABSGL_08533.1 scaffold 10403
181
LLPS-Abg-1023
SAM02757
A0A168PPU0
ABSGL_08573.1 scaffold 10421
182
LLPS-Abg-0414
SAM02774
A0A168PQ35
ABSGL_08590.1 scaffold 10421
183
LLPS-Abg-1599
SAM02896
A0A168PSF5
ABSGL_08712.1 scaffold 10421
184
LLPS-Abg-0342
SAM02931
A0A163JSZ0
ABSGL_08747.1 scaffold 10421
185
LLPS-Abg-1308
SAM02999
A0A163MAT4
ABSGL_08816.1 scaffold 10439
186
LLPS-Abg-1850
SAM03020
A0A163L059
ABSGL_08837.1 scaffold 10450
187
LLPS-Abg-1635
SAM03090
A0A163L0G0
ABSGL_08908.1 scaffold 10588
188
LLPS-Abg-0206
SAM03181
A0A163JUG1
ABSGL_08999.1 scaffold 10666
189
LLPS-Abg-0216
SAM03289
A0A163MBV3
ABSGL_09107.1 scaffold 10677
190
LLPS-Abg-1371
SAM03290
A0A163L0Y0
ABSGL_09108.1 scaffold 10677
191
LLPS-Abg-0794
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