Equus caballus      PcG body


※ PcG body introduction

    PcG bodies, termed polycomb bodies, are subnuclear organelles containing polycomb group proteins. They are a kind of PMLOs located in nucleus, which possess liquid-like behavior and are believed to be formed as a result of biological liquid-liquid phase transitions, where an intricate interplay between RNA and intrinsically disordered proteins (IDPs) or hybrid proteins containing ordered domains and intrinsically disordered protein regions (IDPRs) may play an important role, they are formed as a result of highly regulated and reversible liquid-liquid demixing phase separation and represent condensed liquid droplets, which are invariantly enriched in intrinsically disordered proteins (1). They correspond to local accumulations of PcG proteins, which are important epigenetic regulators that control transcription of their target genes (2). Morover, Polycomb body–associated PHC2 was found to interact with the Polycomb repressive complex, which is relevant to the function of polycomb bodies in transcription regulation (3).

Reference
1. Uversky, V. N. (2017) MappingIntrinsically disordered proteins in overcrowded milieu: Membrane-less organelles, phase separation, and intrinsic disorder. Curr Opin Struct Biol, 44, 18-30. PMID: 27838525
2. Smigova, J., Juda, P., Krejci, J., & Raska, I. (2014) MappingStructural basis of polycomb bodies. Folia Biol (Praha), 60 Suppl 1, 13-20. PMID: 25369336
3. Fong, K. W., Li, Y., Wang, W., Ma, W., Li, K., Qi, R. Z., et al. (2013) MappingWhole-genome screening identifies proteins localized to distinct nuclear bodies. J Cell Biol, 203(1), 149-164. PMID: 24127217


There are 27 genes.  Reviewed (0 or Unreviewed (27

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Eqc-0958
ENSECAG00000039140.1
2
LLPS-Eqc-4302
ENSECAG00000019529.2
F6VM67
3
LLPS-Eqc-1608
ENSECAG00000012977.2
F6R1W8
AEBP2
4
LLPS-Eqc-3541
ENSECAG00000024353.2
F6QQB3
AGO1
5
LLPS-Eqc-1902
ENSECAG00000010885.2
F7DG57
ASXL2
6
LLPS-Eqc-4090
ENSECAG00000020681.2
F6TYN2
BAP1
7
LLPS-Eqc-2436
ENSECAG00000001181.2
F7E096
CBX4
8
LLPS-Eqc-3563
ENSECAG00000018311.2
F7ASV5
CBX6
9
LLPS-Eqc-0816
ENSECAG00000023299.2
F6W2R8
CRAMP1
10
LLPS-Eqc-0864
ENSECAG00000015924.2
F6V9V7
CTCF
11
LLPS-Eqc-0960
ENSECAG00000016295.2
F6XR42
EED
12
LLPS-Eqc-1545
ENSECAG00000025168.2
F6SM75
ELAC2
13
LLPS-Eqc-0625
ENSECAG00000008605.2
F6WSU9
EZH1
14
LLPS-Eqc-2846
ENSECAG00000012439.2
F6SJ66
HOXB5
15
LLPS-Eqc-3160
ENSECAG00000011721.2
F7AJQ2
JARID2
16
LLPS-Eqc-0332
ENSECAG00000017368.2
F6SPP5
MTF2
17
LLPS-Eqc-0627
ENSECAG00000013162.2
F6R950
PCNA
18
LLPS-Eqc-1595
ENSECAG00000017179.2
F7AZ37
PHC2
19
LLPS-Eqc-0039
ENSECAG00000006043.2
F7B013
PHC3
20
LLPS-Eqc-4595
ENSECAG00000017906.2
F6QCQ1
PRC1
21
LLPS-Eqc-2346
ENSECAG00000022784.2
F6V1L0
RBBP4
22
LLPS-Eqc-4337
ENSECAG00000013736.2
F7AK60
RING1
23
LLPS-Eqc-1968
ENSECAG00000024602.2
F6RY48
RNF111
24
LLPS-Eqc-1000
ENSECAG00000014782.2
F7DSH8
RNF2
25
LLPS-Eqc-3012
ENSECAG00000019997.2
F7DCG7
SUZ12
26
LLPS-Eqc-2566
ENSECAG00000016925.3
F6SF39
WAPL
27
LLPS-Eqc-1402
ENSECAG00000005805.2
F7AC13
YY1