Mesocricetus auratus      Nuclear speckle


※ Nuclear speckle introduction

    Nuclear speckles or splicing speckles, also known as interchromatin granule clusters, are membrane-less nuclear organelles enriched in pre-mRNA splicing and transcription factors and play important roles in RNA metabolism, such as transcription, pre-mRNA splicing, 3′-end mRNA processing, and execution of mRNA nuclear export (1; 2). They are dynamic subnuclear structures, and their size, shape, and number can vary accompanied with RNA regulation, nuclear speckles disperse in high activity of mRNA processing when transcription or pre-mRNA splicing is inhibited, GSK-3β can regulate assembly of nuclear speckles (2). Because many naturally intronless mRNAs, including eight exogenously expressed and four endogenous ones, are proved to be associate with NSs, So Nuclear speckles (NSs) are thought to serve as splicing factor storage sites (3).

Reference
1. Lee, K. H., Zhang, P., Kim, H. J., Mitrea, D. M., Sarkar, M., Freibaum, B. D., et al. (2016) C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles. Cell, 167(3), 774-788 e717. PMID: 27768896
2. Wang, K., Wang, L., Wang, J., Chen, S., Shi, M., & Cheng, H. (2018) Intronless mRNAs transit through nuclear speckles to gain export competence. J Cell Biol, 217(11), 3912-3929. PMID: 30194269
3. An, Y., Zou, Y., Cao, Y., Yao, M., Ma, N., Wu, Y., et al. (2019) The nuclear GSK-3beta regulated post-transcriptional processing of mRNA through phosphorylation of SC35. Mol Cell Biochem, 451(1-2), 55-67. PMID: 30030778


There are 108 genes.  Reviewed (0 or Unreviewed (108

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Mea-0109
ENSMAUG00000020737.1
2
LLPS-Mea-0155
ENSMAUG00000009255.1
3
LLPS-Mea-0201
ENSMAUG00000018667.1
4
LLPS-Mea-0475
ENSMAUG00000018929.1
5
LLPS-Mea-0692
ENSMAUG00000020317.1
6
LLPS-Mea-0750
ENSMAUG00000021067.1
7
LLPS-Mea-0889
ENSMAUG00000014365.1
8
LLPS-Mea-0932
ENSMAUG00000002746.1
9
LLPS-Mea-1090
ENSMAUG00000006402.1
10
LLPS-Mea-1783
ENSMAUG00000014063.1
11
LLPS-Mea-1835
ENSMAUG00000009071.1
12
LLPS-Mea-2001
ENSMAUG00000006023.1
13
LLPS-Mea-2278
ENSMAUG00000008180.1
14
LLPS-Mea-2310
ENSMAUG00000004017.1
15
LLPS-Mea-2352
ENSMAUG00000011160.1
16
LLPS-Mea-2367
ENSMAUG00000013539.1
17
LLPS-Mea-2512
ENSMAUG00000004941.1
18
LLPS-Mea-2609
ENSMAUG00000007785.1
19
LLPS-Mea-2711
ENSMAUG00000008769.1
20
LLPS-Mea-2799
ENSMAUG00000011784.1
21
LLPS-Mea-3055
ENSMAUG00000001421.1
22
LLPS-Mea-3335
ENSMAUG00000012266.1
23
LLPS-Mea-3655
ENSMAUG00000020660.1
24
LLPS-Mea-3869
ENSMAUG00000020552.1
25
LLPS-Mea-3932
ENSMAUG00000011097.1
26
LLPS-Mea-4254
ENSMAUG00000015497.1
27
LLPS-Mea-0274
ENSMAUG00000018332.1
A0A1U7QJZ2
Anxa2
28
LLPS-Mea-1375
ENSMAUG00000013855.1
A0A1U7QLN8
Bcas2
29
LLPS-Mea-4176
ENSMAUG00000020443.1
A0A1U7R3E7
Carm1
30
LLPS-Mea-0741
ENSMAUG00000010127.1
A0A1U7QFL8
Ccnl1
31
LLPS-Mea-1892
ENSMAUG00000013120.1
A0A1U7QHF9
Cdc5l
32
LLPS-Mea-0012
ENSMAUG00000020301.1
A0A1U7QMR3
Cdk1
33
LLPS-Mea-0806
ENSMAUG00000020488.1
A0A1U7R4Z0
Cdk9
34
LLPS-Mea-1754
ENSMAUG00000009424.1
A0A1U8C8E3
Cdkl5
35
LLPS-Mea-2014
ENSMAUG00000016789.1
A0A1U7R3D1
Clk2
36
LLPS-Mea-0413
ENSMAUG00000001051.1
A0A1U7QAI7
Csnk1a1
37
LLPS-Mea-2006
ENSMAUG00000000654.1
A0A1U7QWV8
Ctnnbl1
38
LLPS-Mea-0030
ENSMAUG00000021586.1
A0A1U7R1J5
CUNH9orf78
39
LLPS-Mea-1861
ENSMAUG00000008059.1
A0A1U7R640
Ddx39b
40
LLPS-Mea-1425
ENSMAUG00000003267.1
A0A1U7R308
Ddx46
41
LLPS-Mea-0875
ENSMAUG00000000517.1
A0A1U8C3Z8
Dgcr8
42
LLPS-Mea-0492
ENSMAUG00000005728.1
A0A1U7R4Z4
Dnajb1
43
LLPS-Mea-0325
ENSMAUG00000020306.1
A0A1U7QCH3
Dnajc17
44
LLPS-Mea-0763
ENSMAUG00000012125.1
A0A1U7R5L3
Dyrk3
45
LLPS-Mea-1113
ENSMAUG00000001296.1
A0A1U7QI78
Erh
46
LLPS-Mea-0648
ENSMAUG00000007995.1
A0A1U8BZN0
Ezh1
47
LLPS-Mea-2892
ENSMAUG00000008271.1
A0A1U7QQZ8
Fam76b
48
LLPS-Mea-4065
ENSMAUG00000019957.1
A0A1U8C4L8
Fanci
49
LLPS-Mea-2583
ENSMAUG00000012173.1
A0A1U7QVK1
Fbxl18
50
LLPS-Mea-3827
ENSMAUG00000018100.1
A0A1U8BJ90
Fgfr1
51
LLPS-Mea-3238
ENSMAUG00000017785.1
A0A1U8C8U9
Frmd8
52
LLPS-Mea-0125
ENSMAUG00000009599.1
A0A1U7Q6P8
Fus
53
LLPS-Mea-0559
ENSMAUG00000010679.1
A0A1U8BS19
Fyttd1
54
LLPS-Mea-2245
ENSMAUG00000010007.1
A0A1U8BS55
Gli3
55
LLPS-Mea-2077
ENSMAUG00000015683.1
A0A1U8BRN3
Gsk3b
56
LLPS-Mea-2411
ENSMAUG00000020008.1
A0A1U8BXL6
Hif1a
57
LLPS-Mea-1417
ENSMAUG00000011118.1
Q9WUM7
Hipk2
58
LLPS-Mea-0680
ENSMAUG00000005706.1
A0A1U8CXE8
Hnrnpa2b1
59
LLPS-Mea-3197
ENSMAUG00000015268.1
A0A1U7QSW4
Hnrnpk
60
LLPS-Mea-0998
ENSMAUG00000002443.1
A0A1U8CFV0
Hsph1
61
LLPS-Mea-3132
ENSMAUG00000013875.1
A0A1U7R661
Ilf2
62
LLPS-Mea-0131
ENSMAUG00000020405.1
A0A1U8C5Y7
Ilf3
63
LLPS-Mea-1899
ENSMAUG00000008792.1
A0A1U7QCZ8
Ivns1abp
64
LLPS-Mea-2289
ENSMAUG00000001593.1
A0A1U8CID5
LOC101827186
65
LLPS-Mea-2831
ENSMAUG00000018353.1
A0A1U7RHA6
LOC101832176
66
LLPS-Mea-2487
ENSMAUG00000016008.1
A0A1U7RG90
LOC101837501
67
LLPS-Mea-2620
ENSMAUG00000003821.1
A0A1U7Q6T1
Nagk
68
LLPS-Mea-2707
ENSMAUG00000016243.1
A0A1U7R7S2
Nono
69
LLPS-Mea-3822
ENSMAUG00000017652.1
A0A1U7Q9X3
Nsrp1
70
LLPS-Mea-1237
ENSMAUG00000017535.1
A0A1U7R4J9
Nuak2
71
LLPS-Mea-3527
ENSMAUG00000006736.1
A0A1U7QFK2
P2ry12
72
LLPS-Mea-0240
ENSMAUG00000003101.1
A0A1U8CCC2
Plrg1
73
LLPS-Mea-3431
ENSMAUG00000021942.1
A0A1U7QWH6
Pnn
74
LLPS-Mea-3858
ENSMAUG00000012585.1
A0A1U7QB50
Prpf19
75
LLPS-Mea-0392
ENSMAUG00000008350.1
A0A1U7R8K7
Ptbp1
76
LLPS-Mea-0957
ENSMAUG00000019247.1
A0A1U8BVD5
Rbm17
77
LLPS-Mea-0814
ENSMAUG00000019202.1
A0A1U8CCZ5
Rbmx2
78
LLPS-Mea-0760
ENSMAUG00000001871.1
A0A1U8BRI0
Rfwd2
79
LLPS-Mea-1130
ENSMAUG00000005256.1
A0A1U8CJD0
Sarnp
80
LLPS-Mea-3081
ENSMAUG00000014064.1
A0A1U7Q684
Sf1
81
LLPS-Mea-0431
ENSMAUG00000005644.1
A0A1U7R8I5
Sf3a2
82
LLPS-Mea-1183
ENSMAUG00000013931.1
A0A1U8CIT7
Sf3a3
83
LLPS-Mea-3233
ENSMAUG00000022258.1
A0A1U7QN15
Smad3
84
LLPS-Mea-1597
ENSMAUG00000011825.1
A0A1U7Q4L2
Snrnp200
85
LLPS-Mea-1882
ENSMAUG00000001690.1
A0A1U7R6K4
Snrnp35
86
LLPS-Mea-2206
ENSMAUG00000020970.1
A0A1U8CV31
Snrnp70
87
LLPS-Mea-1095
ENSMAUG00000008754.1
A0A1U7QV30
Snrpa
88
LLPS-Mea-0669
ENSMAUG00000015339.1
A0A1U7QZN9
Snrpa1
89
LLPS-Mea-3078
ENSMAUG00000006149.1
A0A1U7QBG9
Snrpb2
90
LLPS-Mea-2355
ENSMAUG00000002086.1
A0A1U8BWI7
Son
91
LLPS-Mea-0892
ENSMAUG00000014041.1
A0A1U8CN03
Srrm2
92
LLPS-Mea-4222
ENSMAUG00000021845.1
A0A1U7QYP9
Srsf1
93
LLPS-Mea-0826
ENSMAUG00000019452.1
A0A1U7QS18
Srsf10
94
LLPS-Mea-0819
ENSMAUG00000008832.1
A0A1U8CGH9
Srsf11
95
LLPS-Mea-2044
ENSMAUG00000022242.1
A0A1U7QAY0
Srsf2
96
LLPS-Mea-1489
ENSMAUG00000011512.1
A0A1U7QS82
Srsf3
97
LLPS-Mea-4538
ENSMAUG00000021940.1
A0A1U7QUR9
Srsf4
98
LLPS-Mea-2385
ENSMAUG00000017430.1
A0A1U7Q9C0
Srsf7
99
LLPS-Mea-2728
ENSMAUG00000011403.1
A0A1U7QHF7
Srsf9
100
LLPS-Mea-0594
ENSMAUG00000011639.1
A0A1U8BSQ8
Sumo1
101
LLPS-Mea-2564
ENSMAUG00000013435.1
A0A1U7QQK5
Tgfbr1
102
LLPS-Mea-3016
ENSMAUG00000009258.1
A0A1U7QNE1
Ttc14
103
LLPS-Mea-0253
ENSMAUG00000006769.1
A0A1U7QPJ1
Xpo1
104
LLPS-Mea-0003
ENSMAUG00000001286.1
A0A1U7Q4C8
Ythdc1
105
LLPS-Mea-3390
ENSMAUG00000014663.1
A0A1U8BVN8
Zc3h11a
106
LLPS-Mea-2565
ENSMAUG00000011126.1
A0A1U7Q4J2
Znf106
107
LLPS-Mea-3017
ENSMAUG00000000415.1
A0A1U8CF37
Znf131
108
LLPS-Mea-0387
ENSMAUG00000008976.1
A0A1U7Q2Z6
Znf688