Tetraodon nigroviridis      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 84 genes.  Reviewed (0 or Unreviewed (84

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ten-0003
ENSTNIG00000003733.1
H3CDL0
2
LLPS-Ten-0013
ENSTNIG00000004613.1
H3CG86
3
LLPS-Ten-0017
ENSTNIG00000018185.1
H3DLF3
4
LLPS-Ten-0040
ENSTNIG00000003169.1
H3C917
5
LLPS-Ten-0078
ENSTNIG00000006494.1
H3CLY3
6
LLPS-Ten-0139
ENSTNIG00000008260.1
H3CS56
7
LLPS-Ten-0172
ENSTNIG00000010201.1
H3CXW5
8
LLPS-Ten-0173
ENSTNIG00000005644.1
H3CJC0
9
LLPS-Ten-0192
ENSTNIG00000007682.1
H3CQG4
10
LLPS-Ten-0207
ENSTNIG00000009198.1
H3BYQ2
11
LLPS-Ten-0239
ENSTNIG00000003722.1
H3C4T6
12
LLPS-Ten-0268
ENSTNIG00000010187.1
H3CXV1
13
LLPS-Ten-0292
ENSTNIG00000011303.1
H3D156
14
LLPS-Ten-0302
ENSTNIG00000004447.1
H3CFQ8
15
LLPS-Ten-0307
ENSTNIG00000007048.1
H3CNL6
16
LLPS-Ten-0317
ENSTNIG00000007458.1
H3CPT3
17
LLPS-Ten-0390
ENSTNIG00000010136.1
H3CXP9
18
LLPS-Ten-0394
ENSTNIG00000012774.1
H3D5F8
19
LLPS-Ten-0396
ENSTNIG00000010773.1
H3CZL1
20
LLPS-Ten-0611
ENSTNIG00000003360.1
H3CCH5
21
LLPS-Ten-0697
ENSTNIG00000000879.1
H3C3I4
22
LLPS-Ten-0752
ENSTNIG00000009153.1
H3CUT0
23
LLPS-Ten-0761
ENSTNIG00000009182.1
H3CUV8
24
LLPS-Ten-0831
ENSTNIG00000013023.1
H3D662
25
LLPS-Ten-0840
ENSTNIG00000011278.1
H3D131
26
LLPS-Ten-0887
ENSTNIG00000017219.1
H3DIL2
27
LLPS-Ten-0962
ENSTNIG00000010039.1
H3CXF0
28
LLPS-Ten-0982
ENSTNIG00000014758.1
H3DBA3
29
LLPS-Ten-1020
ENSTNIG00000009162.1
H3CUT9
30
LLPS-Ten-1058
ENSTNIG00000010578.1
H3CZ06
31
LLPS-Ten-1154
ENSTNIG00000013470.1
H3D7H4
32
LLPS-Ten-1218
ENSTNIG00000004251.1
H3CF52
33
LLPS-Ten-1249
ENSTNIG00000013499.1
H3D7K3
34
LLPS-Ten-1338
ENSTNIG00000004284.1
H3CF87
35
LLPS-Ten-1371
ENSTNIG00000001969.1
H3C7Z3
36
LLPS-Ten-1420
ENSTNIG00000002197.1
H3C8S8
37
LLPS-Ten-1429
ENSTNIG00000013713.1
H3D872
38
LLPS-Ten-1509
ENSTNIG00000010358.1
H3CYC9
39
LLPS-Ten-1511
ENSTNIG00000012930.1
H3D5X0
40
LLPS-Ten-1586
ENSTNIG00000002837.1
H3CAY0
41
LLPS-Ten-1628
ENSTNIG00000017678.1
H3DJY2
42
LLPS-Ten-1762
ENSTNIG00000004917.1
H3CH53
43
LLPS-Ten-1768
ENSTNIG00000007503.1
H3CPX8
44
LLPS-Ten-1782
ENSTNIG00000016860.1
H3DHH9
45
LLPS-Ten-1827
ENSTNIG00000010097.1
H3CXK9
46
LLPS-Ten-1905
ENSTNIG00000007491.1
H3CPW6
47
LLPS-Ten-1906
ENSTNIG00000016047.1
H3DF42
48
LLPS-Ten-1936
ENSTNIG00000012620.1
H3D503
49
LLPS-Ten-2044
ENSTNIG00000013647.1
H3D806
50
LLPS-Ten-2146
ENSTNIG00000015407.1
H3DD82
51
LLPS-Ten-2221
ENSTNIG00000000450.1
H3C087
52
LLPS-Ten-2264
ENSTNIG00000018942.1
H3DNN1
53
LLPS-Ten-2282
ENSTNIG00000011433.1
H3D1J1
54
LLPS-Ten-2294
ENSTNIG00000004210.1
H3CF10
55
LLPS-Ten-2338
ENSTNIG00000003978.1
H3CEB3
56
LLPS-Ten-2438
ENSTNIG00000013176.1
H3D6L9
57
LLPS-Ten-2528
ENSTNIG00000006148.1
H3CKW6
58
LLPS-Ten-2665
ENSTNIG00000011350.1
H3D1A8
59
LLPS-Ten-2688
ENSTNIG00000011276.1
H3D129
60
LLPS-Ten-2718
ENSTNIG00000015048.1
H3DC56
61
LLPS-Ten-2890
ENSTNIG00000005071.1
H3CHK8
62
LLPS-Ten-2970
ENSTNIG00000001018.1
H3C0N3
63
LLPS-Ten-2983
ENSTNIG00000002866.1
H3CB10
64
LLPS-Ten-3095
ENSTNIG00000009877.1
H3C102
65
LLPS-Ten-3455
ENSTNIG00000015173.1
H3DCI6
66
LLPS-Ten-3490
ENSTNIG00000013452.1
H3D7F6
67
LLPS-Ten-3506
ENSTNIG00000004752.1
H3CGM9
68
LLPS-Ten-3549
ENSTNIG00000012753.1
H3D5D8
69
LLPS-Ten-3550
ENSTNIG00000003036.1
H3CBI4
70
LLPS-Ten-3587
ENSTNIG00000010732.1
H3CZG6
71
LLPS-Ten-3749
ENSTNIG00000008327.1
H3CSC3
72
LLPS-Ten-3833
ENSTNIG00000018462.1
H3DM88
73
LLPS-Ten-0642
ENSTNIG00000017760.1
H3DK65
AGO2
74
LLPS-Ten-1852
ENSTNIG00000011328.1
H3D185
AK2
75
LLPS-Ten-3594
ENSTNIG00000006559.1
H3CM53
FLNB
76
LLPS-Ten-3320
ENSTNIG00000012926.1
H3D5W6
GSPT1
77
LLPS-Ten-2361
ENSTNIG00000003320.1
Q4T8Z8
GSTENG00004990001
78
LLPS-Ten-0293
ENSTNIG00000011668.1
Q4S9B4
GSTENG00021977001
79
LLPS-Ten-1956
ENSTNIG00000016295.1
Q4RRC6
GSTENG00030222001
80
LLPS-Ten-2312
ENSTNIG00000002426.1
Q4RH34
GSTENG00034533001
81
LLPS-Ten-1103
ENSTNIG00000010191.1
H3CXV5
LSM4
82
LLPS-Ten-3435
ENSTNIG00000014193.1
Q4RZF0
LYZ
83
LLPS-Ten-0516
ENSTNIG00000016941.1
H3DHR7
NUP62
84
LLPS-Ten-2142
ENSTNIG00000013764.1
H3D8C5
RPL5 (1 of many)