Cavia porcellus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 108 genes.  Reviewed (0 or Unreviewed (108

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Cap-0187
ENSCPOG00000006074.4
A0A286Y2L0
2
LLPS-Cap-1968
ENSCPOG00000010428.4
A0A286Y3L3
AGO2
3
LLPS-Cap-3175
ENSCPOG00000031301.1
A0A286XCV5
AK2
4
LLPS-Cap-0068
ENSCPOG00000001427.4
Q60495
APP
5
LLPS-Cap-0382
ENSCPOG00000001390.4
H0UW34
ATXN2
6
LLPS-Cap-4287
ENSCPOG00000010521.4
H0VH29
ATXN2L
7
LLPS-Cap-0539
ENSCPOG00000006633.4
H0V884
Aurka
8
LLPS-Cap-0203
ENSCPOG00000009473.4
H0VEP8
C9orf72
9
LLPS-Cap-3125
ENSCPOG00000000914.4
A0A286XBZ6
CAMK2G
10
LLPS-Cap-1020
ENSCPOG00000034435.1
A0A286XV31
CBX1
11
LLPS-Cap-2693
ENSCPOG00000005599.4
A0A286XU48
CBX2
12
LLPS-Cap-2927
ENSCPOG00000038461.1
A0A286XDM7
CBX5
13
LLPS-Cap-0375
ENSCPOG00000038705.1
A0A286XUF9
CCNT1
14
LLPS-Cap-1730
ENSCPOG00000014671.4
H0VRK4
CDK7
15
LLPS-Cap-0790
ENSCPOG00000010359.4
H0VGQ5
Cdk9
16
LLPS-Cap-3229
ENSCPOG00000019403.2
H0VVN6
CIRBP
17
LLPS-Cap-0096
ENSCPOG00000007054.4
A0A286Y0W1
CKAP5
18
LLPS-Cap-2022
ENSCPOG00000001180.4
H0UVM1
Cpeb2
19
LLPS-Cap-0901
ENSCPOG00000015255.4
H0VWU0
CSTF2
20
LLPS-Cap-2287
ENSCPOG00000004195.4
H0V2L1
CSTF2T
21
LLPS-Cap-1560
ENSCPOG00000005562.4
H0V5R5
CTTN
22
LLPS-Cap-2573
ENSCPOG00000014623.4
A0A286XRZ4
DAB2IP
23
LLPS-Cap-1506
ENSCPOG00000006780.4
A0A286XLF2
DAXX
24
LLPS-Cap-1204
ENSCPOG00000020185.2
A0A286XIB8
DAZAP1
25
LLPS-Cap-0186
ENSCPOG00000005279.4
H0V532
DCP1B
26
LLPS-Cap-0371
ENSCPOG00000001648.4
H0UWP5
DCP2
27
LLPS-Cap-2797
ENSCPOG00000004327.4
A0A286XSK5
DDX4
28
LLPS-Cap-1002
ENSCPOG00000010587.4
H0VH83
Ddx6
29
LLPS-Cap-0631
ENSCPOG00000020815.2
H0WCI8
DLG4
30
LLPS-Cap-1367
ENSCPOG00000006550.4
A0A286XIF5
DLGAP1
31
LLPS-Cap-1028
ENSCPOG00000037211.1
A0A286X9J3
DYRK1A
32
LLPS-Cap-1992
ENSCPOG00000015595.4
H0VTQ6
EDC3
33
LLPS-Cap-0558
ENSCPOG00000013487.4
H0VNU5
EIF4G3
34
LLPS-Cap-0410
ENSCPOG00000012197.4
A0A286XCK8
ESRP1
35
LLPS-Cap-4025
ENSCPOG00000009502.4
A0A286XG79
EWSR1
36
LLPS-Cap-0179
ENSCPOG00000010192.4
A0A286XF99
FBL
37
LLPS-Cap-0461
ENSCPOG00000002672.4
A0A286XNP9
FLNA
38
LLPS-Cap-0646
ENSCPOG00000010528.4
H0VH35
FLNB
39
LLPS-Cap-0851
ENSCPOG00000003723.4
H0V1J5
FMR1
40
LLPS-Cap-1273
ENSCPOG00000038302.1
A0A286XTI8
FUS
41
LLPS-Cap-2237
ENSCPOG00000012822.4
A0A286XJ68
FYN
42
LLPS-Cap-0038
ENSCPOG00000004216.4
A0A286XPM9
GAR1
43
LLPS-Cap-0872
ENSCPOG00000026804.2
H0W971
GNL2
44
LLPS-Cap-3753
ENSCPOG00000038564.1
A0A286Y265
GRB2
45
LLPS-Cap-2380
ENSCPOG00000009381.4
H0VEH8
GSPT1
46
LLPS-Cap-0373
ENSCPOG00000026092.2
H0WC22
HNRNPA0
47
LLPS-Cap-2965
ENSCPOG00000020972.2
H0VWR2
Hnrnpa1
48
LLPS-Cap-0075
ENSCPOG00000036630.1
A0A286XS96
HNRNPA2B1
49
LLPS-Cap-3300
ENSCPOG00000004251.4
H0V2Q9
HNRNPA3
50
LLPS-Cap-2726
ENSCPOG00000040484.1
A0A286XMP4
HNRNPD
51
LLPS-Cap-0654
ENSCPOG00000015619.4
H0VTS7
Hnrnpdl
52
LLPS-Cap-1670
ENSCPOG00000001485.4
A0A286XJM8
Hnrnph1
53
LLPS-Cap-3704
ENSCPOG00000012405.4
H0W2C0
HNRNPH2
54
LLPS-Cap-0343
ENSCPOG00000006397.4
H0V7P5
HNRNPH3
55
LLPS-Cap-3067
ENSCPOG00000004565.4
H0V3F4
HOMER3
56
LLPS-Cap-0180
ENSCPOG00000004827.4
H0V416
Ipo5
57
LLPS-Cap-1069
ENSCPOG00000000709.4
H0UUI8
ITSN1
58
LLPS-Cap-2743
ENSCPOG00000026318.2
H0VVB1
Kpna2
59
LLPS-Cap-1460
ENSCPOG00000006566.4
A0A286XL74
KPNB1
60
LLPS-Cap-2883
ENSCPOG00000023304.2
H0W6B8
LAT
61
LLPS-Cap-3456
ENSCPOG00000038163.1
A0A286X984
LGALS3
62
LLPS-Cap-3619
ENSCPOG00000021077.2
H0W8M5
LOC100732533
63
LLPS-Cap-4317
ENSCPOG00000010259.4
H0VGH2
LOC101788648
64
LLPS-Cap-2325
ENSCPOG00000024117.2
H0W9Y6
LSM4
65
LLPS-Cap-2564
ENSCPOG00000037750.1
A0A077SA01
LYZF4
66
LLPS-Cap-3010
ENSCPOG00000030093.1
A0A286XBQ9
MAP1LC3A
67
LLPS-Cap-3470
ENSCPOG00000036350.1
A0A286XE45
Map1lc3b
68
LLPS-Cap-3695
ENSCPOG00000013023.4
H0VMS7
Mapt
69
LLPS-Cap-2804
ENSCPOG00000020648.2
H0WDG5
NBR1
70
LLPS-Cap-4365
ENSCPOG00000004779.4
A0A286XBB5
NCK1
71
LLPS-Cap-0798
ENSCPOG00000006685.4
H0V8C6
NPHS1
72
LLPS-Cap-0002
ENSCPOG00000004007.4
H0V265
NUP153
73
LLPS-Cap-3181
ENSCPOG00000038392.1
A0A286Y5X0
NUP62
74
LLPS-Cap-1612
ENSCPOG00000006504.4
H0V7X8
NUP98
75
LLPS-Cap-1285
ENSCPOG00000009552.4
A0A286XH20
PABPC4
76
LLPS-Cap-2477
ENSCPOG00000037504.1
A0A286XZU5
PLK1
77
LLPS-Cap-1223
ENSCPOG00000010823.4
H0VHS5
PNPLA6
78
LLPS-Cap-1376
ENSCPOG00000014812.4
H0VRW6
Polr2a
79
LLPS-Cap-2124
ENSCPOG00000009969.4
H0VFT6
PRKAA2
80
LLPS-Cap-0729
ENSCPOG00000019328.2
A0A286X7Q2
PRMT1
81
LLPS-Cap-0802
ENSCPOG00000000395.4
A0A286Y0W6
PSPC1
82
LLPS-Cap-0052
ENSCPOG00000025512.2
A0A286XA15
PTBP1
83
LLPS-Cap-2479
ENSCPOG00000007730.4
A0A286XPR8
RARA
84
LLPS-Cap-4455
ENSCPOG00000011314.4
A0A286XFB1
RBFOX1
85
LLPS-Cap-0891
ENSCPOG00000008019.4
H0VBE1
RBM14
86
LLPS-Cap-2630
ENSCPOG00000003553.4
H0V151
RBM3
87
LLPS-Cap-3805
ENSCPOG00000001452.3
H0UW86
Rpl23a
88
LLPS-Cap-2437
ENSCPOG00000032453.1
A0A286XN91
RPL5
89
LLPS-Cap-1368
ENSCPOG00000008318.4
H0W7E5
SGO1
90
LLPS-Cap-4673
ENSCPOG00000006983.4
H0VXE1
SHANK3
91
LLPS-Cap-3124
ENSCPOG00000002487.4
H0UYP5
SOS1
92
LLPS-Cap-2329
ENSCPOG00000026534.2
A0A286XDK6
SQSTM1
93
LLPS-Cap-1096
ENSCPOG00000030454.1
A0A286XDQ1
SURF6
94
LLPS-Cap-4088
ENSCPOG00000013114.4
H0VMZ8
SYN1
95
LLPS-Cap-4330
ENSCPOG00000008208.4
H0VBU1
SYN2
96
LLPS-Cap-3883
ENSCPOG00000002979.4
H0UZT6
SYNGAP1
97
LLPS-Cap-1220
ENSCPOG00000011619.4
A0A286XX33
TARDBP
98
LLPS-Cap-2190
ENSCPOG00000008327.4
A0A286XTD6
TIA1
99
LLPS-Cap-3126
ENSCPOG00000003540.4
H0V141
TNPO1
100
LLPS-Cap-4158
ENSCPOG00000005705.4
A0A286XQR7
TNRC6B
101
LLPS-Cap-3698
ENSCPOG00000014252.4
Q9WUR6
TP53
102
LLPS-Cap-3401
ENSCPOG00000039484.1
H0VMS2
TUBA1B
103
LLPS-Cap-1834
ENSCPOG00000013496.4
H0VNV3
UBQLN2
104
LLPS-Cap-2357
ENSCPOG00000023699.2
H0W9Y5
UBXN6
105
LLPS-Cap-3429
ENSCPOG00000034274.1
A0A286XT29
UBXN8
106
LLPS-Cap-1733
ENSCPOG00000003284.4
H0V0H9
WASL
107
LLPS-Cap-2512
ENSCPOG00000034053.1
A0A286XB55
XPO1
108
LLPS-Cap-2892
ENSCPOG00000001728.4
A0A286X7C2
ZNF207