Xenopus tropicalis      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 41 genes.  Reviewed (0 or Unreviewed (41

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Xet-0732
ENSXETG00000019121.3
F6W3F8
casp8ap2
2
LLPS-Xet-0523
ENSXETG00000007748.1
F7CIV7
cct3
3
LLPS-Xet-1264
ENSXETG00000003123.2
F7E741
cdk1
4
LLPS-Xet-3150
ENSXETG00000003281.3
Q28IQ9
cirbp
5
LLPS-Xet-1303
ENSXETG00000010317.3
F6UDV6
crebbp
6
LLPS-Xet-2149
ENSXETG00000013568.3
F6ZDW4
ddx20
7
LLPS-Xet-3499
ENSXETG00000003924.3
Q6DF29
fam118b
8
LLPS-Xet-2073
ENSXETG00000011010.3
F7BHF1
fam192a
9
LLPS-Xet-0542
ENSXETG00000017830.3
Q6P623
fbl
10
LLPS-Xet-0909
ENSXETG00000019647.3
Q6GLC9
fmr1
11
LLPS-Xet-2095
ENSXETG00000005579.3
B1H3B7
gtf2f1
12
LLPS-Xet-3419
ENSXETG00000021451.2
F6REY1
med26
13
LLPS-Xet-0668
ENSXETG00000010014.3
F6YSR2
nolc1
14
LLPS-Xet-0908
ENSXETG00000014962.3
F6YME1
nop56
15
LLPS-Xet-1209
ENSXETG00000022073.3
Q6P364
nop58
16
LLPS-Xet-0722
ENSXETG00000014476.3
F6U8E8
npat
17
LLPS-Xet-1352
ENSXETG00000020623.3
F7CTF7
p2ry12
18
LLPS-Xet-3651
ENSXETG00000011944.3
A4IHM1
patl1
19
LLPS-Xet-1118
ENSXETG00000001952.3
F6RJ55
polr1a
20
LLPS-Xet-2901
ENSXETG00000012591.2
F6V8H8
psme3
21
LLPS-Xet-0006
ENSXETG00000002064.3
F6Q5K9
ruvbl1
22
LLPS-Xet-1640
ENSXETG00000025105.2
Q28GB7
ruvbl2
23
LLPS-Xet-0035
ENSXETG00000017645.3
F7BVK2
sart3
24
LLPS-Xet-2580
ENSXETG00000019914.3
F7A6Z8
slc39a1
25
LLPS-Xet-3829
ENSXETG00000018189.3
F7AWW9
smn2
26
LLPS-Xet-0106
ENSXETG00000003550.3
F6R4W2
snrpb2
27
LLPS-Xet-0256
ENSXETG00000027354.2
Q6GLH6
snrpd1
28
LLPS-Xet-1023
ENSXETG00000004471.3
Q6AZK6
snrpe
29
LLPS-Xet-1977
ENSXETG00000008512.2
A4QNL2
snrpg
30
LLPS-Xet-0693
ENSXETG00000001305.3
F6WB48
spopl
31
LLPS-Xet-0370
ENSXETG00000022072.3
Q6DEP7
sumo1
32
LLPS-Xet-0137
ENSXETG00000006317.3
Q28F51
tardbp
33
LLPS-Xet-0306
ENSXETG00000015624.3
F6TTE7
tert
34
LLPS-Xet-1552
ENSXETG00000003534.3
F6VJ53
toe1
35
LLPS-Xet-3140
ENSXETG00000003356.3
F7DIJ6
ubtf
36
LLPS-Xet-2884
ENSXETG00000019167.3
F7BL66
uspl1
37
LLPS-Xet-0162
ENSXETG00000013948.4
Q6P8D6
vrk1
38
LLPS-Xet-0924
ENSXETG00000014943.2
F7E8A4
wrap53
39
LLPS-Xet-2655
ENSXETG00000002224.3
F7EP94
xpo1
40
LLPS-Xet-3919
ENSXETG00000026151.1
Q28H71
zgpat
41
LLPS-Xet-1927
ENSXETG00000009253.2
F7CUN3
znf277