Oryza indica      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 21 genes.  Reviewed (0 or Unreviewed (21

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ori-0296
BGIOSGA007205
B8AGZ5
OsI_05681
2
LLPS-Ori-0730
BGIOSGA007487
B8AHD6
OsI_05772
3
LLPS-Ori-2477
BGIOSGA006793
A2X2Y3
OsI_06554
4
LLPS-Ori-1019
BGIOSGA006746
A2X352
OsI_06634
5
LLPS-Ori-0664
BGIOSGA006653
B8AFW0
OsI_06835
6
LLPS-Ori-1189
BGIOSGA006154
A2X6K5
OsI_07847
7
LLPS-Ori-2323
BGIOSGA005452
A2XAH2
OsI_09252
8
LLPS-Ori-0251
BGIOSGA009310
A2XB50
OsI_09490
9
LLPS-Ori-0623
BGIOSGA010914
B8AM21
OsI_11177
10
LLPS-Ori-2200
BGIOSGA010733
A2XGN8
OsI_11565
11
LLPS-Ori-0538
BGIOSGA010727
A2XGQ0
OsI_11580
12
LLPS-Ori-0900
BGIOSGA013523
B8AJX6
OsI_13439
13
LLPS-Ori-0600
BGIOSGA009403
B8ANT2
OsI_14416
14
LLPS-Ori-1018
BGIOSGA021762
B8B3R2
OsI_21954
15
LLPS-Ori-1259
BGIOSGA023261
B8B4L0
OsI_23688
16
LLPS-Ori-0193
BGIOSGA024720
B8B7Q1
OsI_25110
17
LLPS-Ori-0995
BGIOSGA023917
B8B8C6
OsI_26821
18
LLPS-Ori-1471
BGIOSGA027762
A2YQL5
OsI_27580
19
LLPS-Ori-2216
BGIOSGA028227
A2YSK2
OsI_28302
20
LLPS-Ori-0856
BGIOSGA036340
B8BP80
OsI_38050
21
LLPS-Ori-1036
BGIOSGA037784
A2ZMP5
OsI_39099