Brassica napus      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 21 genes.  Reviewed (0 or Unreviewed (21

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Brn-1003
GSBRNA2T00157577001
2
LLPS-Brn-1012
GSBRNA2T00138180001
3
LLPS-Brn-1897
GSBRNA2T00116121001
4
LLPS-Brn-2126
GSBRNA2T00143175001
5
LLPS-Brn-2328
GSBRNA2T00009438001
6
LLPS-Brn-2641
GSBRNA2T00099227001
A0A078GEK7
BnaA01g21570D
7
LLPS-Brn-1758
GSBRNA2T00007168001
A0A078ITX4
BnaA01g36100D
8
LLPS-Brn-0346
GSBRNA2T00001359001
A0A078F6X2
BnaA02g05570D
9
LLPS-Brn-2195
GSBRNA2T00123347001
A0A078F7K0
BnaA03g18730D
10
LLPS-Brn-2779
GSBRNA2T00090234001
A0A078FRU9
BnaA04g12350D
11
LLPS-Brn-1798
GSBRNA2T00048521001
A0A078FBH8
BnaA05g12150D
12
LLPS-Brn-1863
GSBRNA2T00070798001
A0A078IH41
BnaA07g01560D
13
LLPS-Brn-1615
GSBRNA2T00074700001
A0A078HXD6
BnaA08g00080D
14
LLPS-Brn-0365
GSBRNA2T00127289001
A0A078HD67
BnaA09g41200D
15
LLPS-Brn-1802
GSBRNA2T00103043001
A0A078ILV2
BnaA09g56200D
16
LLPS-Brn-1224
GSBRNA2T00111876001
A0A078FWM7
BnaAnng03000D
17
LLPS-Brn-0326
GSBRNA2T00098881001
A0A078JFI7
BnaAnng20540D
18
LLPS-Brn-0987
GSBRNA2T00062179001
A0A078HGI1
BnaC03g48680D
19
LLPS-Brn-1027
GSBRNA2T00000293001
A0A078JES5
BnaC04g56220D
20
LLPS-Brn-1474
GSBRNA2T00038972001
A0A078GTT8
BnaC05g44350D
21
LLPS-Brn-1353
GSBRNA2T00019290001
A0A078GB88
BnaC08g42550D