• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Brn-1012

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Ensembl Gene: GSBRNA2T00138180001
Ensembl Protein: CDX82832
Organism: Brassica napus
Taxa ID: 3708
LLPS Type: Regulator


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Cajal body, OthersPredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblCDX82832CDX82832

▼ SEQUENCE

Protein Sequence (FASTA)
1     MGEGGETIAI  AEENGGLIVD  SGETNSTWPA  MRFDVSPYRT  HHFSKQFRAS  RNPNNFLKGL  60
61    KWSPDGSCFL  ASSEDNTLSL  FYLPQDGGES  NGYGVTIPEE  DSYGASLLVN  EGESVYDFCW  120
121   YPYMSVSDPL  TCVFATTTRD  HPIHLWDSSS  GELRCTYRAY  DAMDEITAAF  SIGFNPGGNK  180
181   IFAGYNNSIR  VFDLHRPGRD  FGQYSTLQKK  KEGQAGCILS  TLAFSPTNSG  MLAVGSYGQT  240
241   TGIYREDNME  LLYVLHGQEG  GVTHVQFSKD  GNYLYAGGRK  DPYILCWDMR  KSVEIVYKLY  300
301   RATENTNQRV  FFDIEPCGRH  LGTGGQDGLV  HMYDLQTGNW  VSGYQAASDT  VNAFSFHPYL  360
361   PMAATSSGHR  RFSIPDDDDE  DNNDVQLKAD  ENCVSLWSFY  VTSQENTSDE  HNNGLASNSH  420
421   HLNVTGEEEN  A  431
Nucleotide CDS Sequence (FASTA)
1     ATGGGTGAAG  GAGGAGAAAC  AATAGCAATA  GCAGAAGAAA  ACGGCGGACT  AATTGTAGAC  60
61    TCAGGAGAGA  CAAACTCCAC  GTGGCCCGCC  ATGAGATTCG  ATGTCTCTCC  TTACCGAACA  120
121   CACCATTTCT  CCAAGCAGTT  CAGGGCCTCT  CGAAACCCTA  ACAATTTCCT  CAAGGGTCTT  180
181   AAATGGTCAC  CTGATGGTTC  GTGTTTCCTT  GCAAGCTCTG  AGGACAATAC  ACTTAGTCTG  240
241   TTCTATCTGC  CTCAAGATGG  AGGGGAGTCT  AATGGTTATG  GAGTGACAAT  CCCTGAAGAA  300
301   GATTCATATG  GTGCGAGTCT  TCTTGTGAAT  GAGGGTGAAT  CTGTTTATGA  TTTCTGTTGG  360
361   TATCCATACA  TGTCAGTTTC  AGACCCATTA  ACATGCGTCT  TCGCTACCAC  AACTAGAGAC  420
421   CATCCCATCC  ATCTTTGGGA  TAGCTCTTCT  GGTGAGCTCC  GATGCACGTA  CCGAGCCTAT  480
481   GATGCTATGG  ATGAAATAAC  TGCTGCCTTT  TCAATTGGAT  TTAATCCTGG  TGGAAACAAG  540
541   ATCTTTGCTG  GTTATAACAA  CTCTATAAGA  GTGTTTGATC  TTCATCGTCC  CGGTAGAGAT  600
601   TTTGGGCAGT  ATTCAACTCT  ACAGAAAAAG  AAAGAAGGCC  AAGCAGGTTG  TATATTATCT  660
661   ACTCTTGCCT  TCTCTCCAAC  TAATTCTGGA  ATGTTGGCGG  TGGGCTCTTA  CGGACAGACT  720
721   ACTGGGATTT  ATAGAGAAGA  CAACATGGAG  CTGTTGTATG  TTTTACATGG  TCAAGAAGGT  780
781   GGCGTTACAC  ATGTTCAGTT  TTCAAAGGAT  GGGAACTACT  TATATGCAGG  AGGCCGCAAG  840
841   GATCCTTACA  TTCTTTGCTG  GGATATGCGG  AAATCTGTTG  AGATAGTTTA  CAAATTGTAC  900
901   AGAGCAACAG  AGAACACAAA  CCAACGTGTC  TTCTTTGATA  TTGAGCCGTG  TGGACGACAT  960
961   CTTGGTACCG  GTGGTCAGGA  TGGTCTGGTT  CATATGTATG  ATTTACAAAC  TGGAAACTGG  1020
1021  GTCTCTGGAT  ATCAAGCTGC  TTCAGATACT  GTCAATGCTT  TTTCTTTCCA  CCCATACCTT  1080
1081  CCAATGGCTG  CTACATCCTC  TGGTCACAGA  CGTTTCTCAA  TTCCTGATGA  TGACGATGAA  1140
1141  GATAACAACG  ATGTTCAATT  AAAAGCTGAT  GAAAACTGTG  TATCTCTGTG  GAGTTTCTAC  1200
1201  GTCACATCCC  AAGAGAACAC  TTCTGATGAA  CATAACAATG  GCCTTGCAAG  CAATTCTCAT  1260
1261  CACTTGAATG  TCACAGGAGA  GGAAGAAAAC  GCCTAA  1296

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Bro-0142Brassica oleracea99.520.0 840
LLPS-Brr-2203Brassica rapa95.510.0 790
LLPS-Art-2148Arabidopsis thaliana90.530.0 756
LLPS-Arl-1094Arabidopsis lyrata90.120.0 765
LLPS-Gor-1687Gossypium raimondii75.070.0 601
LLPS-Cus-0366Cucumis sativus73.950.0 594
LLPS-Thc-1919Theobroma cacao73.80.0 589
LLPS-Viv-1477Vitis vinifera73.090.0 575
LLPS-Coc-1708Corchorus capsularis72.80.0 578
LLPS-Pot-2513Populus trichocarpa72.220.0 586
LLPS-Met-2069Medicago truncatula71.160.0 567
LLPS-Prp-1530Prunus persica70.070.0 588
LLPS-Sot-1008Solanum tuberosum69.890.0 559
LLPS-Sol-0072Solanum lycopersicum69.550.0 565
LLPS-Hea-0723Helianthus annuus69.270.0 582
LLPS-Tru-0685Triticum urartu68.671e-153 447
LLPS-Via-0875Vigna angularis68.460.0 561
LLPS-Phv-1019Phaseolus vulgaris68.370.0 558
LLPS-Mae-1137Manihot esculenta67.720.0 602
LLPS-Tra-1328Triticum aestivum67.270.0 528
LLPS-Orr-0604Oryza rufipogon67.123e-180 516
LLPS-Hov-1377Hordeum vulgare67.10.0 528
LLPS-Mua-1126Musa acuminata66.931e-180 550
LLPS-Brd-0799Brachypodium distachyon66.840.0 530
LLPS-Vir-0347Vigna radiata66.679e-67 226
LLPS-Sei-0157Setaria italica66.670.0 526
LLPS-Glm-2763Glycine max66.50.0 547
LLPS-Ori-0900Oryza indica66.40.0 522
LLPS-Ors-1088Oryza sativa66.40.0 523
LLPS-Lep-1164Leersia perrieri66.193e-167 484
LLPS-Sob-1386Sorghum bicolor66.150.0 521
LLPS-Zem-1297Zea mays65.892e-179 515
LLPS-Nia-1335Nicotiana attenuata65.770.0 571
LLPS-Amt-0988Amborella trichopoda64.290.0 528
LLPS-Php-1731Physcomitrella patens62.21e-173 501
LLPS-Dac-1122Daucus carota61.481e-179 514
LLPS-Sem-0505Selaginella moellendorffii56.081e-151 444
LLPS-Leo-1945Lepisosteus oculatus46.828e-77 252
LLPS-Urm-2817Ursus maritimus45.353e-2092.4
LLPS-Gaa-0656Gasterosteus aculeatus44.744e-56 191
LLPS-Xim-2304Xiphophorus maculatus44.314e-86 280
LLPS-Tar-3228Takifugu rubripes44.053e-88 285
LLPS-Scf-1280Scleropages formosus43.814e-85 276
LLPS-Chr-0129Chlamydomonas reinhardtii43.84e-101 315
LLPS-Ten-2856Tetraodon nigroviridis43.753e-89 283
LLPS-Pof-1600Poecilia formosa43.711e-86 281
LLPS-Pes-2354Pelodiscus sinensis43.51e-91 291
LLPS-Aim-1309Ailuropoda melanoleuca43.281e-84 275
LLPS-Poa-2063Pongo abelii43.275e-70 231
LLPS-Mod-3520Monodelphis domestica43.18e-80 259
LLPS-Gog-0750Gorilla gorilla42.991e-84 276
LLPS-Hos-0024Homo sapiens42.998e-85 276
LLPS-Pat-3101Pan troglodytes42.991e-84 276
LLPS-Anc-1867Anolis carolinensis42.993e-84 270
LLPS-Asm-2072Astyanax mexicanus42.941e-86 281
LLPS-Orl-2620Oryzias latipes42.863e-86 278
LLPS-Loa-2168Loxodonta africana42.867e-82 268
LLPS-Man-0679Macaca nemestrina42.697e-83 271
LLPS-Eqc-1530Equus caballus42.694e-86 280
LLPS-Cap-0648Cavia porcellus42.564e-85 277
LLPS-Myl-1665Myotis lucifugus42.512e-81 262
LLPS-Cea-3462Cercocebus atys42.391e-82 271
LLPS-Chs-2222Chlorocebus sabaeus42.391e-82 271
LLPS-Maf-0378Macaca fascicularis42.391e-82 271
LLPS-Fec-1122Felis catus42.392e-84 275
LLPS-Rhb-3097Rhinopithecus bieti42.395e-84 274
LLPS-Mam-1457Macaca mulatta42.391e-82 271
LLPS-Ict-2078Ictidomys tridecemlineatus42.392e-84 275
LLPS-Mea-1349Mesocricetus auratus42.352e-86 280
LLPS-Caf-1502Canis familiaris42.345e-83 271
LLPS-Fud-3263Fukomys damarensis42.321e-78 259
LLPS-Orc-0559Oryctolagus cuniculus42.222e-82 272
LLPS-Ran-3115Rattus norvegicus42.172e-85 277
LLPS-Ova-0735Ovis aries42.092e-83 272
LLPS-Paa-1924Papio anubis42.093e-82 270
LLPS-Otg-2494Otolemur garnettii42.095e-82 268
LLPS-Scm-3881Scophthalmus maximus41.947e-84 274
LLPS-Mum-2685Mus musculus41.871e-84 275
LLPS-Aon-1054Aotus nancymaae41.793e-82 270
LLPS-Caj-2250Callithrix jacchus41.792e-81 268
LLPS-Tut-0310Tursiops truncatus41.798e-84 273
LLPS-Bot-3548Bos taurus41.747e-83 272
LLPS-Dar-0076Danio rerio41.695e-84 274
LLPS-Xet-0924Xenopus tropicalis41.345e-80 259
LLPS-Cas-1668Carlito syrichta41.321e-82 270
LLPS-Sah-0800Sarcophilus harrisii41.213e-86 278
LLPS-Dio-1007Dipodomys ordii40.99e-83 271
LLPS-Icp-1118Ictalurus punctatus40.72e-79 262
LLPS-Pap-1918Pan paniscus40.124e-72 242
LLPS-Mup-2105Mustela putorius furo40.04e-83 271
LLPS-Mal-4334Mandrillus leucophaeus39.762e-68 233
LLPS-Abg-0434Absidia glauca39.66e-75 248
LLPS-Cii-0879Ciona intestinalis38.238e-63 215
LLPS-Gaga-3418Gallus gallus38.041e-1888.2
LLPS-Osl-0745Ostreococcus lucimarinus37.51e-32 129
LLPS-Nol-0513Nomascus leucogenys37.462e-63 220
LLPS-Sus-0573Sus scrofa37.274e-1373.6
LLPS-Lac-1064Latimeria chalumnae37.124e-52 186
LLPS-Pug-0167Puccinia graminis34.645e-52 186
LLPS-Gas-0847Galdieria sulphuraria34.256e-58 202
LLPS-Drm-0818Drosophila melanogaster33.633e-50 184
LLPS-Put-0849Puccinia triticina33.333e-43 162
LLPS-Tum-0313Tuber melanosporum33.143e-38 147
LLPS-Mel-0888Melampsora laricipopulina32.479e-35 136
LLPS-Scp-0651Schizosaccharomyces pombe30.236e-32 130
LLPS-Yal-0054Yarrowia lipolytica29.853e-0963.2
LLPS-Crn-0506Cryptococcus neoformans29.751e-39 152
LLPS-Miv-0115Microbotryum violaceum29.396e-35 138
LLPS-Cae-0979Caenorhabditis elegans29.072e-1582.4
LLPS-Asni-0209Aspergillus niger28.291e-32 132
LLPS-Scj-0197Schizosaccharomyces japonicus28.264e-0859.3
LLPS-Asc-1260Aspergillus clavatus28.177e-1784.3
LLPS-Asn-1233Aspergillus nidulans27.894e-29 122
LLPS-Ast-1266Aspergillus terreus27.451e-31 129
LLPS-Kop-0028Komagataella pastoris27.011e-0758.2
LLPS-Blg-0144Blumeria graminis26.926e-1889.7
LLPS-Dos-0861Dothistroma septosporum26.822e-2198.6
LLPS-Scc-0552Schizosaccharomyces cryophilus26.423e-27 115
LLPS-Spr-0958Sporisorium reilianum26.381e-29 124
LLPS-Asfu-1261Aspergillus fumigatus26.212e-1890.1
LLPS-Gag-1481Gaeumannomyces graminis26.21e-0965.1
LLPS-Cogr-0888Colletotrichum graminicola25.794e-1787.4
LLPS-Aso-0905Aspergillus oryzae25.676e-24 107
LLPS-Nef-1290Neosartorya fischeri25.645e-1785.9
LLPS-Beb-1626Beauveria bassiana25.04e-1581.3
LLPS-Tag-0853Taeniopygia guttata24.793e-0756.6
LLPS-Trv-0804Trichoderma virens24.522e-1376.3
LLPS-Ora-2652Ornithorhynchus anatinus24.371e-0860.5
LLPS-Meg-1418Meleagris gallopavo24.371e-0860.1
LLPS-Fia-1323Ficedula albicollis24.371e-0860.5
LLPS-Usm-0904Ustilago maydis24.224e-23 105
LLPS-Coo-0523Colletotrichum orbiculare24.211e-1479.3
LLPS-Ved-0267Verticillium dahliae24.175e-1374.7
LLPS-Orp-2192Oryza punctata24.134e-0755.8
LLPS-Cog-0067Colletotrichum gloeosporioides24.091e-1376.6
LLPS-Orn-0386Oreochromis niloticus23.952e-0859.7
LLPS-Anp-3342Anas platyrhynchos23.863e-0756.2
LLPS-Scs-0620Sclerotinia sclerotiorum23.772e-1272.8
LLPS-Chc-0561Chondrus crispus23.345e-1476.6