LLPS-Zem-0519
100279524
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | THO complex subunit 4 |
| Gene Name: | 100279524, ZEAMMB73_Zm00001d028655 |
| Ensembl Gene: | Zm00001d028655 |
| Ensembl Protein: | Zm00001d028655_P003 |
| Organism: | Zea mays |
| Taxa ID: | 4577 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nuclear speckle, Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Zm00001d028655_T003 | Zm00001d028655_P003 |
| Ensembl | Zm00001d028655_T002 | Zm00001d028655_P002 |
| Ensembl | Zm00001d028655_T001 | Zm00001d028655_P001 |
| UniProt | B6T346, B6T346_MAIZE | |
| GeneBank | CM007647, EU959411, BT054393, EU962068 | ONL96649.1, ONL96647.1, ACG34186.1, ACG31529.1, ACL53000.1 |
| RefSeq | NM_001152522.1 | NP_001145994.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAETLDMTLD DIIKNNKKSN PSSGGARRSR GGSAPGGGSG GVGPTRRSFK RAGNRQAPYQ 60 61 PPKAPDAAWQ HDMYPAVAAG GGGGGRVSAL ETGTKLYISN LDFGVSNDDI KELFSELGDL 120 121 KRFSIIYDRS GRSKGTAEVV FARRSDAVAA VKKYNNVQLD GKPMKIEIVG TNTPTASAAL 180 181 PVSNGGHARN AVRSAPRGAA PAGVPQRRPH QRGGRRSGGS GGGRRGKERS KPKSAEELDA 240 241 DLEKYHADAM QTN 253 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCAGGAGC TGTTCTCTGA GCTAGGTGAT CTGAAGCGTT TTTCGATAAT ATATGATCGA 60 61 AGTGGGAGGT CTAAGGGAAC AGCTGAAGTT GTATTTGCAA GGCGTTCTGA TGCTGTAGCG 120 121 GCGGTGAAGA AATATAACAA TGTCCAACTT GATGGTAAGC CCATGAAGAT AGAGATAGTT 180 181 GGGACCAATA CTCCAACTGC ATCTGCTGCT CTTCCAGTCT CCAATGGTGG CCATGCTAGG 240 241 AATGCTGTGA GGAGTGCACC GAGGGGTGCT GCCCCAGCAG GTGTGCCGCA GCGAAGACCT 300 301 CATCAGAGGG GTGGGAGGCG TAGTGGTGGA TCTGGGGGTG GTCGTCGTGG CAAGGAGCGC 360 361 AGCAAGCCAA AGTCGGCTGA AGAACTCGAC GCTGACTTGG AGAAGTATCA TGCTGATGCG 420 421 ATGCAGACCA ACTAA 435 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sob-1327 | Sorghum bicolor | 91.05 | 8e-126 | 365 |
| LLPS-Sei-0258 | Setaria italica | 87.45 | 7e-110 | 327 |
| LLPS-Orr-2292 | Oryza rufipogon | 80.72 | 4e-42 | 148 |
| LLPS-Hov-0533 | Hordeum vulgare | 78.82 | 1e-41 | 150 |
| LLPS-Orb-1403 | Oryza barthii | 77.4 | 2e-70 | 224 |
| LLPS-Orp-1970 | Oryza punctata | 74.61 | 3e-70 | 221 |
| LLPS-Orgl-1612 | Oryza glumaepatula | 74.52 | 7e-78 | 244 |
| LLPS-Orbr-2124 | Oryza brachyantha | 72.52 | 2e-97 | 293 |
| LLPS-Ori-1158 | Oryza indica | 72.26 | 1e-95 | 289 |
| LLPS-Orni-0697 | Oryza nivara | 72.26 | 1e-95 | 289 |
| LLPS-Ors-0880 | Oryza sativa | 72.26 | 1e-95 | 289 |
| LLPS-Org-2275 | Oryza glaberrima | 70.25 | 2e-93 | 283 |
| LLPS-Tra-0121 | Triticum aestivum | 67.82 | 7e-91 | 276 |
| LLPS-Sem-1225 | Selaginella moellendorffii | 67.57 | 3e-43 | 149 |
| LLPS-Brd-0153 | Brachypodium distachyon | 66.67 | 9e-91 | 276 |
| LLPS-Lep-0504 | Leersia perrieri | 66.3 | 2e-93 | 283 |
| LLPS-Mua-0524 | Musa acuminata | 62.39 | 7e-42 | 151 |
| LLPS-Art-1526 | Arabidopsis thaliana | 61.18 | 7e-31 | 121 |
| LLPS-Hea-2289 | Helianthus annuus | 60.95 | 2e-36 | 135 |
| LLPS-Sol-1024 | Solanum lycopersicum | 60.82 | 2e-31 | 120 |
| LLPS-Nia-2214 | Nicotiana attenuata | 58.22 | 1e-35 | 130 |
| LLPS-Leo-1358 | Lepisosteus oculatus | 58.02 | 4e-24 | 102 |
| LLPS-Asm-0936 | Astyanax mexicanus | 57.85 | 1e-31 | 124 |
| LLPS-Phv-1708 | Phaseolus vulgaris | 57.75 | 6e-68 | 217 |
| LLPS-Sot-1317 | Solanum tuberosum | 57.43 | 1e-60 | 197 |
| LLPS-Mae-1355 | Manihot esculenta | 57.25 | 2e-70 | 223 |
| LLPS-Via-0936 | Vigna angularis | 57.03 | 2e-72 | 228 |
| LLPS-Glm-1256 | Glycine max | 56.98 | 6e-61 | 199 |
| LLPS-Arl-2449 | Arabidopsis lyrata | 56.7 | 6e-52 | 177 |
| LLPS-Met-0383 | Medicago truncatula | 56.34 | 2e-66 | 214 |
| LLPS-Coc-1840 | Corchorus capsularis | 56.25 | 3e-68 | 218 |
| LLPS-Viv-1037 | Vitis vinifera | 55.47 | 3e-73 | 230 |
| LLPS-Dac-0926 | Daucus carota | 55.22 | 4e-56 | 186 |
| LLPS-Pot-1816 | Populus trichocarpa | 54.72 | 3e-69 | 220 |
| LLPS-Tru-0342 | Triticum urartu | 54.49 | 1e-46 | 162 |
| LLPS-Anp-2309 | Anas platyrhynchos | 53.85 | 1e-16 | 78.6 |
| LLPS-Gor-1639 | Gossypium raimondii | 53.54 | 3e-64 | 207 |
| LLPS-Thc-0613 | Theobroma cacao | 53.15 | 3e-67 | 215 |
| LLPS-Ran-0467 | Rattus norvegicus | 52.88 | 2e-22 | 96.3 |
| LLPS-Ere-1043 | Erinaceus europaeus | 52.88 | 8e-23 | 97.1 |
| LLPS-Fia-2324 | Ficedula albicollis | 52.34 | 4e-29 | 113 |
| LLPS-Orn-1166 | Oreochromis niloticus | 51.94 | 9e-30 | 118 |
| LLPS-Fud-2661 | Fukomys damarensis | 51.72 | 1e-27 | 111 |
| LLPS-Cus-1057 | Cucumis sativus | 51.54 | 1e-38 | 142 |
| LLPS-Prp-1116 | Prunus persica | 51.5 | 3e-38 | 140 |
| LLPS-Vir-0855 | Vigna radiata | 51.03 | 2e-62 | 204 |
| LLPS-Pes-1656 | Pelodiscus sinensis | 50.65 | 1e-16 | 79.0 |
| LLPS-Xet-3839 | Xenopus tropicalis | 50.62 | 3e-13 | 72.8 |
| LLPS-Tag-3542 | Taeniopygia guttata | 50.62 | 4e-18 | 82.8 |
| LLPS-Brn-0675 | Brassica napus | 50.59 | 1e-61 | 200 |
| LLPS-Chr-0234 | Chlamydomonas reinhardtii | 50.0 | 1e-22 | 99.0 |
| LLPS-Cap-0174 | Cavia porcellus | 50.0 | 3e-29 | 116 |
| LLPS-Pof-3585 | Poecilia formosa | 50.0 | 2e-13 | 73.2 |
| LLPS-Rhb-2185 | Rhinopithecus bieti | 50.0 | 1e-28 | 114 |
| LLPS-Bro-0537 | Brassica oleracea | 49.8 | 1e-60 | 199 |
| LLPS-Bot-1908 | Bos taurus | 49.63 | 3e-29 | 116 |
| LLPS-Paa-2069 | Papio anubis | 49.63 | 6e-29 | 115 |
| LLPS-Maf-0946 | Macaca fascicularis | 49.63 | 2e-29 | 116 |
| LLPS-Chs-0428 | Chlorocebus sabaeus | 49.63 | 4e-29 | 116 |
| LLPS-Cea-0931 | Cercocebus atys | 49.63 | 1e-28 | 115 |
| LLPS-Gog-2696 | Gorilla gorilla | 49.63 | 5e-29 | 116 |
| LLPS-Caf-1204 | Canis familiaris | 49.63 | 3e-29 | 116 |
| LLPS-Poa-3299 | Pongo abelii | 49.63 | 4e-29 | 116 |
| LLPS-Eqc-0460 | Equus caballus | 49.63 | 2e-29 | 117 |
| LLPS-Mam-0204 | Macaca mulatta | 49.63 | 7e-29 | 115 |
| LLPS-Nol-3833 | Nomascus leucogenys | 49.63 | 6e-29 | 115 |
| LLPS-Pat-1922 | Pan troglodytes | 49.63 | 7e-29 | 115 |
| LLPS-Fec-2360 | Felis catus | 49.63 | 4e-29 | 116 |
| LLPS-Man-2323 | Macaca nemestrina | 49.63 | 1e-28 | 115 |
| LLPS-Ova-1641 | Ovis aries | 49.62 | 2e-27 | 111 |
| LLPS-Caj-3822 | Callithrix jacchus | 49.62 | 1e-27 | 112 |
| LLPS-Scm-2828 | Scophthalmus maximus | 49.61 | 2e-28 | 114 |
| LLPS-Tar-1830 | Takifugu rubripes | 49.38 | 2e-13 | 73.2 |
| LLPS-Cis-0466 | Ciona savignyi | 49.35 | 8e-14 | 74.3 |
| LLPS-Mal-4670 | Mandrillus leucophaeus | 49.24 | 8e-28 | 111 |
| LLPS-Aon-4793 | Aotus nancymaae | 49.24 | 3e-28 | 113 |
| LLPS-Aim-0901 | Ailuropoda melanoleuca | 49.23 | 1e-26 | 108 |
| LLPS-Cas-3872 | Carlito syrichta | 49.21 | 2e-26 | 108 |
| LLPS-Sah-2885 | Sarcophilus harrisii | 49.14 | 5e-25 | 104 |
| LLPS-Hos-2292 | Homo sapiens | 48.89 | 3e-28 | 114 |
| LLPS-Mup-0506 | Mustela putorius furo | 48.78 | 5e-14 | 74.7 |
| LLPS-Loa-1260 | Loxodonta africana | 48.59 | 2e-30 | 117 |
| LLPS-Otg-2317 | Otolemur garnettii | 48.55 | 1e-28 | 114 |
| LLPS-Php-2383 | Physcomitrella patens | 48.24 | 1e-55 | 186 |
| LLPS-Brr-1218 | Brassica rapa | 48.22 | 1e-58 | 192 |
| LLPS-Tut-2309 | Tursiops truncatus | 48.15 | 9e-27 | 109 |
| LLPS-Dio-1078 | Dipodomys ordii | 48.15 | 5e-28 | 112 |
| LLPS-Tum-1520 | Tuber melanosporum | 48.1 | 2e-15 | 76.6 |
| LLPS-Pap-1457 | Pan paniscus | 47.86 | 6e-29 | 115 |
| LLPS-Ict-4579 | Ictidomys tridecemlineatus | 47.66 | 2e-24 | 101 |
| LLPS-Myl-3294 | Myotis lucifugus | 47.56 | 2e-13 | 73.2 |
| LLPS-Icp-2497 | Ictalurus punctatus | 46.45 | 2e-27 | 111 |
| LLPS-Amt-1520 | Amborella trichopoda | 46.35 | 2e-51 | 175 |
| LLPS-Mum-0807 | Mus musculus | 46.34 | 3e-13 | 72.4 |
| LLPS-Sus-4018 | Sus scrofa | 46.34 | 3e-13 | 72.4 |
| LLPS-Urm-3176 | Ursus maritimus | 46.34 | 3e-13 | 72.8 |
| LLPS-Orc-0198 | Oryctolagus cuniculus | 46.34 | 3e-13 | 72.4 |
| LLPS-Orl-3399 | Oryzias latipes | 45.93 | 7e-27 | 111 |
| LLPS-Scf-1006 | Scleropages formosus | 44.04 | 9e-33 | 124 |
| LLPS-Dar-0677 | Danio rerio | 43.75 | 1e-28 | 115 |
| LLPS-Cii-0182 | Ciona intestinalis | 43.68 | 1e-28 | 114 |
| LLPS-Lac-3917 | Latimeria chalumnae | 43.39 | 1e-29 | 117 |
| LLPS-Mea-3869 | Mesocricetus auratus | 43.08 | 1e-30 | 119 |
| LLPS-Mod-1320 | Monodelphis domestica | 42.72 | 3e-30 | 120 |
| LLPS-Gaga-1318 | Gallus gallus | 42.03 | 2e-34 | 130 |
| LLPS-Ten-1026 | Tetraodon nigroviridis | 41.18 | 7e-34 | 128 |
| LLPS-Gaa-3059 | Gasterosteus aculeatus | 40.48 | 3e-30 | 119 |
| LLPS-Xim-3793 | Xiphophorus maculatus | 40.2 | 2e-31 | 122 |
| LLPS-Drm-2123 | Drosophila melanogaster | 38.54 | 2e-32 | 125 |
| LLPS-Orm-1987 | Oryza meridionalis | 37.85 | 6e-35 | 132 |
| LLPS-Asf-0964 | Aspergillus flavus | 37.5 | 3e-14 | 74.7 |
| LLPS-Aso-1478 | Aspergillus oryzae | 37.35 | 1e-14 | 74.7 |
| LLPS-Gas-0116 | Galdieria sulphuraria | 35.48 | 7e-21 | 92.4 |
| LLPS-Abg-0229 | Absidia glauca | 35.34 | 4e-16 | 79.3 |
| LLPS-Mel-0304 | Melampsora laricipopulina | 34.81 | 1e-14 | 74.7 |
| LLPS-Map-1280 | Magnaporthe poae | 29.33 | 2e-14 | 75.5 |
| LLPS-Trr-0502 | Trichoderma reesei | 29.3 | 3e-14 | 74.7 |