LLPS-Xim-3372
FAM53B (1 of many)
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | FAM53B (1 of many) |
| Ensembl Gene: | ENSXMAG00000029687.1 |
| Ensembl Protein: | ENSXMAP00000025457.1 |
| Organism: | Xiphophorus maculatus |
| Taxa ID: | 8083 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Paraspeckle | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSXMAT00000035812.1 | ENSXMAP00000025457.1 |
| UniProt | A0A3B5Q3S4, A0A3B5Q3S4_XIPMA | |
| RefSeq | XM_005804897.2 | XP_005804954.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MVIIFSKTLE KKKGVNDVTS KSPDRQPSDL HIMSRGTTLF SRGTVEADRW LDLGRSCAIQ 60 61 QKATDSSLES LWDVVPEPGG LHWAKEPGST TAITSLIRDL TLGNTGTIGT HAMPVQTHFT 120 121 PATQAPAAPP SKRQCRSLSF SDEFSGFRSS WRPQGSRVWT SVEKRRYHSG GSVRGGASHF 180 181 PPMQRSSSFS LPSCLSAPSD GTRDPPLFNQ QLPLHLQFTA SSVSPSSVFS HHSHSQVFLR 240 241 PLSLSHEQIS LRELQREEVS ETSSPDSTPE LGRRGAGKGS LSRSRSQPCV LNDKKIAMKR 300 301 RRPEDAQEQR PSLDLAKMTQ KLQTFQSLSW PGFSSLDGFK SSPSGHSFDP AGQSEADFAA 360 361 VPERGLELRT DMVADDEEED SSYGELDSDS ACSVDSRPGS PACCTVDSKR TLWKGDCVKQ 420 421 RDIFQLGGEL DLEQIERN 438 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGTGATCA TTTTCTCAAA AACACTGGAA AAGAAGAAGG GTGTCAATGA TGTAACGTCC 60 61 AAGAGCCCCG ACAGACAGCC GAGTGATCTC CACATCATGA GCAGAGGGAC CACCCTCTTC 120 121 TCCCGTGGAA CCGTGGAGGC AGACAGATGG TTGGACCTGG GACGAAGCTG TGCCATCCAG 180 181 CAGAAAGCTA CAGATTCCAG TTTGGAGAGC CTGTGGGACG TGGTGCCTGA ACCCGGAGGC 240 241 CTGCACTGGG CCAAAGAGCC GGGCAGCACC ACAGCTATCA CCAGTCTGAT AAGAGATCTC 300 301 ACTCTGGGTA ACACCGGCAC AATCGGCACC CACGCGATGC CCGTCCAGAC ACATTTCACA 360 361 CCCGCAACCC AAGCTCCTGC GGCTCCCCCG AGCAAACGGC AATGCCGCTC CCTGTCCTTC 420 421 TCAGACGAGT TCAGTGGGTT CCGCTCATCT TGGAGACCTC AGGGCTCCCG AGTGTGGACG 480 481 TCGGTGGAGA AACGTAGGTA CCACAGTGGG GGGAGCGTCC GAGGCGGAGC GAGCCACTTC 540 541 CCCCCAATGC AGCGCAGCTC CAGCTTTAGT TTGCCCTCAT GCTTGAGCGC ACCCTCAGAC 600 601 GGCACCCGGG ACCCGCCACT CTTCAACCAG CAACTGCCTC TCCACCTTCA GTTCACCGCC 660 661 TCTTCGGTTT CCCCCAGCTC TGTTTTCTCA CACCACTCCC ACAGTCAGGT CTTCCTCCGG 720 721 CCTCTGTCCC TTTCCCACGA GCAGATCAGT CTGAGAGAGC TCCAGCGGGA GGAGGTGTCC 780 781 GAGACCAGCT CTCCGGACTC GACCCCGGAG CTCGGAAGGA GAGGCGCTGG GAAGGGCAGT 840 841 CTCTCTCGGA GCAGGTCCCA GCCCTGTGTG CTGAACGACA AAAAGATTGC TATGAAGCGC 900 901 AGGAGACCAG AGGATGCCCA GGAGCAACGT CCCTCCCTGG ATTTGGCAAA GATGACTCAG 960 961 AAACTTCAGA CCTTTCAAAG CCTCAGCTGG CCCGGATTCT CGTCCTTGGA CGGCTTCAAG 1020 1021 TCCAGCCCGA GCGGGCACTC GTTCGATCCC GCCGGCCAGT CGGAGGCGGA CTTCGCTGCT 1080 1081 GTGCCTGAGC GGGGGCTGGA GTTGCGGACG GACATGGTGG CGGACGACGA GGAAGAGGAC 1140 1141 TCGTCCTACG GGGAACTGGA CAGCGATTCC GCTTGCAGCG TGGACTCGCG GCCCGGTTCC 1200 1201 CCTGCGTGCT GCACTGTGGA CAGTAAACGC ACCCTCTGGA AGGGTGACTG CGTGAAACAG 1260 1261 AGGGATATTT TCCAGCTCGG TGGGGAGCTG GACCTTGAGC AGATTGAAAG AAACTGA 1317 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Pof-4101 | Poecilia formosa | 95.66 | 0.0 | 747 |
| LLPS-Orl-2764 | Oryzias latipes | 70.89 | 2e-175 | 506 |
| LLPS-Scm-2733 | Scophthalmus maximus | 67.69 | 1e-174 | 504 |
| LLPS-Orn-2266 | Oreochromis niloticus | 64.48 | 2e-155 | 453 |
| LLPS-Mod-1199 | Monodelphis domestica | 64.44 | 1e-21 | 99.0 |
| LLPS-Fud-2206 | Fukomys damarensis | 64.44 | 1e-17 | 89.0 |
| LLPS-Tar-3335 | Takifugu rubripes | 64.13 | 6e-146 | 431 |
| LLPS-Loa-2104 | Loxodonta africana | 60.47 | 7e-06 | 52.0 |
| LLPS-Aon-3106 | Aotus nancymaae | 60.47 | 1e-06 | 54.3 |
| LLPS-Caj-4580 | Callithrix jacchus | 60.47 | 8e-07 | 55.1 |
| LLPS-Cas-0988 | Carlito syrichta | 59.52 | 2e-06 | 53.9 |
| LLPS-Gaa-3350 | Gasterosteus aculeatus | 58.63 | 5e-132 | 394 |
| LLPS-Cap-2974 | Cavia porcellus | 58.14 | 9e-06 | 51.6 |
| LLPS-Nol-1632 | Nomascus leucogenys | 58.14 | 7e-06 | 52.0 |
| LLPS-Ran-3240 | Rattus norvegicus | 55.81 | 4e-06 | 53.1 |
| LLPS-Mea-2575 | Mesocricetus auratus | 55.81 | 3e-06 | 53.5 |
| LLPS-Mum-3655 | Mus musculus | 55.81 | 3e-06 | 53.1 |
| LLPS-Sah-0238 | Sarcophilus harrisii | 54.32 | 4e-11 | 68.2 |
| LLPS-Ict-1767 | Ictidomys tridecemlineatus | 51.85 | 2e-07 | 57.4 |
| LLPS-Leo-3837 | Lepisosteus oculatus | 50.0 | 2e-103 | 321 |
| LLPS-Lac-3600 | Latimeria chalumnae | 48.82 | 4e-60 | 204 |
| LLPS-Meg-1507 | Meleagris gallopavo | 44.97 | 4e-31 | 127 |
| LLPS-Fia-1856 | Ficedula albicollis | 44.32 | 7e-31 | 126 |
| LLPS-Ten-3732 | Tetraodon nigroviridis | 43.33 | 6e-76 | 249 |
| LLPS-Pat-4369 | Pan troglodytes | 42.69 | 2e-49 | 177 |
| LLPS-Gaga-2711 | Gallus gallus | 41.72 | 5e-46 | 169 |
| LLPS-Tag-2165 | Taeniopygia guttata | 41.52 | 4e-65 | 220 |
| LLPS-Caf-0378 | Canis familiaris | 41.33 | 6e-52 | 186 |
| LLPS-Aim-3631 | Ailuropoda melanoleuca | 41.33 | 3e-52 | 187 |
| LLPS-Pes-2749 | Pelodiscus sinensis | 40.62 | 8e-38 | 144 |
| LLPS-Mup-3378 | Mustela putorius furo | 40.46 | 5e-49 | 178 |
| LLPS-Mam-3153 | Macaca mulatta | 39.9 | 2e-49 | 179 |
| LLPS-Rhb-0515 | Rhinopithecus bieti | 39.9 | 4e-11 | 68.6 |
| LLPS-Mal-1506 | Mandrillus leucophaeus | 39.9 | 1e-10 | 66.6 |
| LLPS-Cea-0716 | Cercocebus atys | 39.9 | 1e-10 | 67.0 |
| LLPS-Man-2035 | Macaca nemestrina | 39.62 | 1e-49 | 180 |
| LLPS-Paa-3941 | Papio anubis | 39.62 | 1e-49 | 180 |
| LLPS-Maf-2561 | Macaca fascicularis | 39.62 | 1e-49 | 180 |
| LLPS-Pap-1622 | Pan paniscus | 38.63 | 2e-57 | 201 |
| LLPS-Hos-1967 | Homo sapiens | 38.63 | 4e-57 | 200 |
| LLPS-Poa-3335 | Pongo abelii | 38.38 | 1e-54 | 193 |
| LLPS-Chs-4474 | Chlorocebus sabaeus | 38.38 | 4e-56 | 197 |
| LLPS-Sus-2138 | Sus scrofa | 37.82 | 2e-53 | 190 |
| LLPS-Dio-3468 | Dipodomys ordii | 37.77 | 2e-57 | 201 |
| LLPS-Gog-4650 | Gorilla gorilla | 37.08 | 4e-48 | 176 |
| LLPS-Ora-1567 | Ornithorhynchus anatinus | 32.74 | 9e-24 | 104 |
| LLPS-Xet-0748 | Xenopus tropicalis | 30.73 | 1e-21 | 100 |