LLPS-Chs-4474
FAM53B
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | FAM53B |
| Ensembl Gene: | ENSCSAG00000004523.1 |
| Ensembl Protein: | ENSCSAP00000000857.1 |
| Organism: | Chlorocebus sabaeus |
| Taxa ID: | 60711 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Paraspeckle | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSCSAT00000002555.1 | ENSCSAP00000000857.1 |
| UniProt | A0A0D9QWW8, A0A0D9QWW8_CHLSB | |
| GeneBank | AQIB01042267 | |
| RefSeq | XM_007964346.1, XM_007964347.1 | XP_007962537.1, XP_007962538.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MVMVLSESLS TRGADSIACG TFSPELHTPK KMSQGPTLFS CGIMENDRWR DLDRKCPLQI 60 61 DQPSTSIWEC LPEKDNSLWH REAVTACAVT SLIKDLSISD HNGNPSAPPS KRQCRSLSFS 120 121 DEMSSCRTSW RPLGSKVWTP VEKRRCYSGG SVQRYSNGFS TMQRSSSFSL PSRANVLSSP 180 181 CDQAGLHHRF GGQPCQGVPG SAPCGQAGDT WNPDPHPMGG GRLDLQRSLS CSHEQFSFVE 240 241 YCPPSASSTP ASTPELARRS SGLSRSRSQP CVLNDKKVGV KRRRPEEVQE QRPSLDLAKM 300 301 AQNCQTFSSL SCLSAGTEDC GPQSPFARHV SNTRAWTALL SASGPGGRTP AGTPVPEPLP 360 361 SSFDDHLACQ EDLSCEESDG CALDEDCGRR AEPAAAWRDR GAPGNSLCSL DGELDIEQIE 420 421 KN 422 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGTGATGG TCCTAAGTGA AAGCCTCAGC ACCCGGGGAG CTGACTCCAT CGCATGCGGG 60 61 ACCTTCAGCC CTGAACTGCA CACGCCAAAG AAGATGAGTC AAGGACCTAC ACTTTTCTCT 120 121 TGTGGAATTA TGGAAAATGA CAGATGGCGA GACCTGGACA GGAAATGCCC TCTTCAGATT 180 181 GACCAACCGA GCACCAGCAT CTGGGAATGC CTGCCTGAAA AGGACAACTC ACTATGGCAC 240 241 CGGGAGGCAG TGACCGCCTG TGCTGTGACC AGTCTGATCA AAGACCTCAG CATCAGCGAC 300 301 CACAACGGGA ACCCCTCAGC ACCCCCTAGC AAGCGTCAGT GCCGCTCACT GTCCTTCTCC 360 361 GATGAGATGT CCAGCTGCCG GACATCATGG AGGCCCCTGG GCTCCAAAGT CTGGACTCCT 420 421 GTGGAAAAGA GACGCTGCTA CAGTGGGGGC AGCGTCCAGC GCTATTCCAA CGGCTTCAGC 480 481 ACCATGCAGA GGAGCTCCAG CTTCAGCCTC CCTTCCCGGG CCAACGTGCT CTCCTCACCC 540 541 TGCGACCAGG CAGGACTCCA CCATCGATTT GGAGGGCAGC CCTGCCAAGG GGTGCCAGGC 600 601 TCAGCCCCGT GTGGACAGGC AGGTGACACC TGGAACCCTG ACCCGCACCC GATGGGAGGG 660 661 GGCCGGCTGG ACCTGCAACG GTCCCTCTCT TGCTCACATG AGCAGTTTTC CTTTGTGGAA 720 721 TACTGTCCTC CCTCAGCCAG CAGCACACCT GCCTCCACGC CAGAGCTGGC AAGACGCTCC 780 781 AGCGGCCTTT CCCGCAGCCG CTCCCAGCCG TGTGTCCTTA ACGATAAGAA GGTCGGTGTT 840 841 AAAAGGCGGC GCCCTGAAGA AGTGCAAGAG CAGAGGCCTT CTCTAGACCT TGCCAAGATG 900 901 GCACAGAACT GTCAGACCTT CAGCAGCCTC AGCTGCCTGA GCGCAGGGAC AGAGGACTGC 960 961 GGTCCCCAGA GCCCCTTCGC CCGCCACGTC AGCAACACCA GGGCCTGGAC CGCCCTGCTC 1020 1021 TCAGCCTCCG GCCCAGGGGG CAGGACCCCC GCTGGGACCC CGGTCCCTGA GCCTCTTCCC 1080 1081 TCTTCCTTCG ACGACCACCT CGCCTGCCAG GAGGACCTGT CCTGTGAGGA GTCAGACGGC 1140 1141 TGTGCCCTGG ATGAGGATTG CGGCAGGAGA GCAGAGCCAG CCGCAGCCTG GCGGGACCGC 1200 1201 GGGGCCCCCG GGAACAGCCT CTGCTCCCTG GATGGCGAGT TGGACATCGA GCAGATAGAG 1260 1261 AAGAACTGA 1269 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-1967 | Homo sapiens | 98.1 | 0.0 | 763 |
| LLPS-Pap-1622 | Pan paniscus | 98.1 | 0.0 | 765 |
| LLPS-Poa-3335 | Pongo abelii | 97.63 | 0.0 | 759 |
| LLPS-Aon-3474 | Aotus nancymaae | 95.73 | 0.0 | 742 |
| LLPS-Paa-3941 | Papio anubis | 95.55 | 0.0 | 733 |
| LLPS-Cea-0803 | Cercocebus atys | 95.55 | 0.0 | 733 |
| LLPS-Maf-2561 | Macaca fascicularis | 95.55 | 0.0 | 733 |
| LLPS-Man-2035 | Macaca nemestrina | 95.55 | 0.0 | 733 |
| LLPS-Mal-3418 | Mandrillus leucophaeus | 95.32 | 0.0 | 732 |
| LLPS-Mam-3153 | Macaca mulatta | 95.32 | 0.0 | 729 |
| LLPS-Rhb-4463 | Rhinopithecus bieti | 95.32 | 0.0 | 731 |
| LLPS-Caj-1637 | Callithrix jacchus | 94.08 | 0.0 | 726 |
| LLPS-Gog-4650 | Gorilla gorilla | 93.44 | 0.0 | 712 |
| LLPS-Nol-3039 | Nomascus leucogenys | 92.97 | 0.0 | 713 |
| LLPS-Cas-0246 | Carlito syrichta | 91.51 | 0.0 | 702 |
| LLPS-Pat-4369 | Pan troglodytes | 89.97 | 0.0 | 526 |
| LLPS-Dio-3468 | Dipodomys ordii | 87.03 | 0.0 | 652 |
| LLPS-Ict-0464 | Ictidomys tridecemlineatus | 86.38 | 0.0 | 657 |
| LLPS-Caf-0378 | Canis familiaris | 86.15 | 0.0 | 657 |
| LLPS-Cap-0117 | Cavia porcellus | 85.88 | 0.0 | 658 |
| LLPS-Mea-4554 | Mesocricetus auratus | 85.85 | 0.0 | 657 |
| LLPS-Aim-3631 | Ailuropoda melanoleuca | 85.45 | 0.0 | 654 |
| LLPS-Fud-2206 | Fukomys damarensis | 85.34 | 0.0 | 641 |
| LLPS-Mum-3466 | Mus musculus | 85.14 | 0.0 | 649 |
| LLPS-Sus-2138 | Sus scrofa | 84.98 | 0.0 | 645 |
| LLPS-Loa-4323 | Loxodonta africana | 83.77 | 0.0 | 565 |
| LLPS-Ran-4832 | Rattus norvegicus | 83.64 | 0.0 | 621 |
| LLPS-Mup-3378 | Mustela putorius furo | 83.33 | 0.0 | 613 |
| LLPS-Lac-3600 | Latimeria chalumnae | 72.24 | 2e-99 | 305 |
| LLPS-Gaga-2711 | Gallus gallus | 68.52 | 4e-82 | 263 |
| LLPS-Mod-1199 | Monodelphis domestica | 65.78 | 6e-107 | 326 |
| LLPS-Pes-2749 | Pelodiscus sinensis | 65.12 | 2e-90 | 282 |
| LLPS-Tag-2165 | Taeniopygia guttata | 60.61 | 3e-128 | 382 |
| LLPS-Fia-1856 | Ficedula albicollis | 55.56 | 8e-112 | 340 |
| LLPS-Meg-1507 | Meleagris gallopavo | 52.44 | 1e-105 | 326 |
| LLPS-Ten-3732 | Tetraodon nigroviridis | 47.06 | 2e-36 | 142 |
| LLPS-Leo-3837 | Lepisosteus oculatus | 45.37 | 9e-68 | 228 |
| LLPS-Orn-2266 | Oreochromis niloticus | 44.97 | 7e-30 | 123 |
| LLPS-Orl-2764 | Oryzias latipes | 42.19 | 1e-29 | 123 |
| LLPS-Sah-2048 | Sarcophilus harrisii | 40.15 | 1e-54 | 192 |
| LLPS-Pof-4101 | Poecilia formosa | 40.04 | 4e-50 | 181 |
| LLPS-Gaa-3350 | Gasterosteus aculeatus | 38.8 | 4e-43 | 161 |
| LLPS-Ora-1567 | Ornithorhynchus anatinus | 38.78 | 1e-34 | 136 |
| LLPS-Xim-3372 | Xiphophorus maculatus | 38.56 | 1e-48 | 177 |
| LLPS-Tar-3335 | Takifugu rubripes | 38.24 | 2e-36 | 143 |
| LLPS-Scm-2733 | Scophthalmus maximus | 37.58 | 2e-45 | 169 |
| LLPS-Xet-0748 | Xenopus tropicalis | 35.24 | 7e-35 | 138 |