LLPS-Xet-1971
samd4b
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Sterile alpha motif domain-containing 4B |
| Gene Name: | samd4b |
| Ensembl Gene: | ENSXETG00000002903.3 |
| Ensembl Protein: | ENSXETP00000006360.3 |
| Organism: | Xenopus tropicalis |
| Taxa ID: | 8364 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSXETT00000006360.3 | ENSXETP00000006360.3 |
| UniProt | F7EFX5, F7EFX5_XENTR | |
| GeneBank | AAMC01082809, AAMC01082808, AAMC01082807 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKFRDQVSTL SDWFKGWNEC EQTVALLSLL KRITRTQARF LQLCLEHSLS DCTEIHILET 60 61 EANSAALISQ WHQESKEKVI SLLLSHLPLL QPRNTEAKCE YMKLLQKVLA YTTESNLYIE 120 121 ESRQLLSYAL IHPATTLEDR NSLALWLSHL EERFSTGYSR HGRIETPSAH LRQDSDEWQG 180 181 PVDPGMGEAS LSWQDKPPRE NGLMPFHSSN LVSSGIQNMG SNTGTVLSCQ VHPSPLKRSM 240 241 SLIPTSQQAP GEWMGSEEVG SRSVFLTPDP APLSPQSSVA SSGSEQTEEV SAGRNTFTED 300 301 GSGMKVHFVQ LLMSLQLGYK QAHFLCLRVK ERIKITQCIF CLKQNVTKGA RHKIALSIQK 360 361 LRERQSVLKS LEKDILEGGN VRNALQELQQ IVITPIKYYR PNQAEVTGNE QTPPQRPNQD 420 421 PSCKGSDENE PPPGLTADGF QQQSAPVCDS EPAVPPIAEG DLPGQLTRVL GKVCTQLLVS 480 481 RPDEDNITCY LQLLEKCISH EAFTEIQKKR LMSWKQQVLK LLRTLPRKAL LEMQGYRQQK 540 541 GCSWAFASNS LPIAGSVGSS IARRGQRPFQ MPPRAVPPSR INVMSPGSIG GVSPRHALTS 600 601 PSTGGQGRQN LWFANPGGSN SMPCPSHSSV QRTHSLPVHT SPQSILKFPP DCQVPGADLE 660 661 INPRLESLCL SMTEHALEEG TDKTSTI 687 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAATTCC GTGATCAGGT GAGCACATTG TCTGACTGGT TTAAGGGCTG GAATGAATGT 60 61 GAACAAACGG TGGCCCTTCT ATCTCTACTT AAGAGGATCA CCAGGACCCA GGCACGTTTC 120 121 CTGCAACTGT GTTTGGAGCA TTCTTTATCA GACTGTACTG AAATACACAT CCTTGAGACA 180 181 GAGGCCAACA GTGCAGCTCT CATCAGCCAA TGGCATCAAG AGTCCAAAGA GAAGGTGATT 240 241 TCTCTTCTCC TTTCTCACTT GCCGCTACTG CAGCCACGGA ACACAGAAGC CAAATGCGAG 300 301 TATATGAAAC TCCTGCAGAA AGTTCTGGCT TACACCACCG AGAGCAATTT GTACATAGAA 360 361 GAGAGTCGGC AGTTACTGTC CTATGCACTT ATTCATCCTG CAACCACCCT TGAAGACCGA 420 421 AACTCACTGG CTTTATGGCT GAGTCATCTA GAAGAACGAT TCTCTACAGG CTACAGCCGT 480 481 CATGGAAGAA TTGAAACACC TTCTGCACAT CTACGGCAGG ATTCAGATGA ATGGCAGGGG 540 541 CCAGTTGACC CTGGTATGGG GGAAGCAAGC CTCAGCTGGC AGGATAAACC ACCACGTGAA 600 601 AATGGCCTGA TGCCCTTCCA TTCTTCTAAT TTGGTGTCCT CAGGCATTCA GAATATGGGG 660 661 AGCAACACAG GAACAGTGCT GTCCTGCCAG GTACATCCAA GTCCACTTAA ACGCTCCATG 720 721 TCACTTATTC CAACATCTCA GCAGGCACCT GGTGAATGGA TGGGGTCAGA GGAAGTGGGA 780 781 AGTCGGTCAG TGTTTCTCAC CCCAGACCCT GCTCCACTGT CACCACAGAG CAGTGTGGCA 840 841 TCGTCAGGCA GTGAGCAAAC TGAGGAAGTG AGCGCTGGAC GCAACACTTT CACAGAGGAT 900 901 GGGAGTGGTA TGAAAGTCCA TTTTGTGCAA TTGCTCATGA GTTTACAGCT TGGTTATAAA 960 961 CAGGCACACT TCCTTTGCTT GAGGGTAAAG GAGAGAATAA AAATCACACA ATGCATTTTC 1020 1021 TGTCTCAAAC AGAATGTCAC CAAAGGTGCA AGACACAAAA TCGCTTTGAG TATACAAAAA 1080 1081 CTCCGGGAGA GACAGAGTGT TCTCAAGTCC TTAGAAAAAG ATATTTTAGA AGGCGGAAAT 1140 1141 GTGCGTAATG CTCTTCAGGA GTTGCAGCAG ATTGTCATCA CACCCATTAA ATACTACCGC 1200 1201 CCTAACCAGG CAGAGGTTAC TGGCAATGAG CAAACCCCAC CACAGAGGCC AAACCAAGAC 1260 1261 CCAAGCTGTA AAGGATCAGA TGAGAATGAA CCTCCGCCTG GACTGACAGC AGATGGTTTC 1320 1321 CAACAACAGA GTGCCCCAGT CTGTGATTCT GAGCCAGCAG TTCCACCTAT AGCAGAGGGA 1380 1381 GATCTCCCAG GGCAGCTTAC CAGAGTGCTT GGAAAAGTTT GTACACAGCT TTTGGTTTCC 1440 1441 CGGCCGGATG AGGACAACAT CACATGTTAC CTGCAGCTTT TAGAAAAGTG CATTTCACAT 1500 1501 GAGGCATTCA CAGAAATACA AAAGAAGAGG CTGATGTCTT GGAAGCAGCA AGTTTTGAAA 1560 1561 TTACTGCGGA CACTTCCCAG AAAAGCACTG CTGGAAATGC AGGGGTACAG ACAACAGAAG 1620 1621 GGGTGCAGCT GGGCATTTGC ATCCAACTCT CTCCCCATAG CTGGATCTGT GGGGTCTTCC 1680 1681 ATAGCTCGGA GAGGACAGCG TCCATTTCAG ATGCCTCCTA GGGCAGTGCC ACCTTCCCGT 1740 1741 ATTAATGTAA TGAGTCCTGG GTCAATCGGA GGTGTCTCTC CACGGCATGC ACTTACCAGC 1800 1801 CCGAGCACTG GAGGCCAGGG TCGGCAGAAC CTGTGGTTTG CCAACCCTGG GGGCAGCAAC 1860 1861 AGTATGCCAT GCCCAAGTCA CAGTTCAGTG CAACGCACAC ATTCATTACC TGTACACACT 1920 1921 TCCCCGCAGA GTATTTTAAA GTTTCCTCCT GATTGCCAGG TGCCTGGGGC TGATTTAGAG 1980 1981 ATTAACCCCC GGTTGGAGTC CTTGTGTCTG AGTATGACAG AGCATGCTTT AGAAGAGGGA 2040 2041 ACAGACAAGA CATCGACCAT CTGA 2064 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Gog-3646 | Gorilla gorilla | 81.82 | 9e-28 | 123 |
| LLPS-Pes-3546 | Pelodiscus sinensis | 72.65 | 0.0 | 958 |
| LLPS-Scm-2875 | Scophthalmus maximus | 72.55 | 1e-59 | 219 |
| LLPS-Mum-3897 | Mus musculus | 71.04 | 0.0 | 924 |
| LLPS-Ran-4578 | Rattus norvegicus | 71.04 | 0.0 | 924 |
| LLPS-Aon-4821 | Aotus nancymaae | 70.55 | 0.0 | 932 |
| LLPS-Anc-1300 | Anolis carolinensis | 70.55 | 0.0 | 937 |
| LLPS-Cas-4091 | Carlito syrichta | 70.55 | 0.0 | 917 |
| LLPS-Pap-4364 | Pan paniscus | 70.33 | 0.0 | 926 |
| LLPS-Pat-3320 | Pan troglodytes | 70.33 | 0.0 | 926 |
| LLPS-Hos-2338 | Homo sapiens | 70.33 | 0.0 | 926 |
| LLPS-Cap-4653 | Cavia porcellus | 70.29 | 0.0 | 922 |
| LLPS-Mea-2191 | Mesocricetus auratus | 70.26 | 0.0 | 922 |
| LLPS-Cea-3234 | Cercocebus atys | 70.21 | 0.0 | 917 |
| LLPS-Chs-1995 | Chlorocebus sabaeus | 70.21 | 0.0 | 917 |
| LLPS-Maf-2802 | Macaca fascicularis | 70.21 | 0.0 | 917 |
| LLPS-Mal-3800 | Mandrillus leucophaeus | 70.21 | 0.0 | 917 |
| LLPS-Man-2712 | Macaca nemestrina | 70.21 | 0.0 | 917 |
| LLPS-Mam-4271 | Macaca mulatta | 70.21 | 0.0 | 917 |
| LLPS-Mup-1372 | Mustela putorius furo | 70.13 | 0.0 | 915 |
| LLPS-Fec-4260 | Felis catus | 70.09 | 0.0 | 919 |
| LLPS-Paa-3704 | Papio anubis | 70.07 | 0.0 | 914 |
| LLPS-Ict-2352 | Ictidomys tridecemlineatus | 70.04 | 0.0 | 914 |
| LLPS-Fud-1238 | Fukomys damarensis | 69.89 | 0.0 | 923 |
| LLPS-Ova-4123 | Ovis aries | 69.8 | 0.0 | 915 |
| LLPS-Mod-2692 | Monodelphis domestica | 69.8 | 0.0 | 917 |
| LLPS-Caf-2335 | Canis familiaris | 69.8 | 0.0 | 902 |
| LLPS-Sus-4166 | Sus scrofa | 69.66 | 0.0 | 913 |
| LLPS-Eqc-2715 | Equus caballus | 69.66 | 0.0 | 914 |
| LLPS-Tut-0140 | Tursiops truncatus | 69.65 | 0.0 | 899 |
| LLPS-Otg-2675 | Otolemur garnettii | 69.65 | 0.0 | 917 |
| LLPS-Myl-4028 | Myotis lucifugus | 69.42 | 0.0 | 926 |
| LLPS-Rhb-3469 | Rhinopithecus bieti | 69.41 | 0.0 | 923 |
| LLPS-Orc-1812 | Oryctolagus cuniculus | 69.32 | 0.0 | 916 |
| LLPS-Dio-0512 | Dipodomys ordii | 69.3 | 0.0 | 805 |
| LLPS-Loa-3671 | Loxodonta africana | 69.03 | 0.0 | 910 |
| LLPS-Sah-0158 | Sarcophilus harrisii | 67.98 | 0.0 | 875 |
| LLPS-Urm-3003 | Ursus maritimus | 67.81 | 0.0 | 883 |
| LLPS-Nol-3041 | Nomascus leucogenys | 67.62 | 0.0 | 864 |
| LLPS-Leo-3103 | Lepisosteus oculatus | 65.91 | 0.0 | 860 |
| LLPS-Lac-3071 | Latimeria chalumnae | 65.86 | 0.0 | 816 |
| LLPS-Caj-3201 | Callithrix jacchus | 65.65 | 0.0 | 917 |
| LLPS-Scf-3504 | Scleropages formosus | 65.27 | 0.0 | 837 |
| LLPS-Orn-2030 | Oreochromis niloticus | 63.71 | 0.0 | 788 |
| LLPS-Orl-0978 | Oryzias latipes | 63.28 | 0.0 | 783 |
| LLPS-Tar-2949 | Takifugu rubripes | 62.32 | 0.0 | 785 |
| LLPS-Ten-2796 | Tetraodon nigroviridis | 62.1 | 0.0 | 787 |
| LLPS-Pof-0424 | Poecilia formosa | 62.09 | 0.0 | 799 |
| LLPS-Xim-1346 | Xiphophorus maculatus | 62.05 | 0.0 | 797 |
| LLPS-Dar-3476 | Danio rerio | 60.95 | 9e-164 | 495 |
| LLPS-Gaga-3259 | Gallus gallus | 58.27 | 0.0 | 573 |
| LLPS-Fia-3295 | Ficedula albicollis | 57.04 | 0.0 | 694 |
| LLPS-Tag-1619 | Taeniopygia guttata | 56.94 | 0.0 | 688 |
| LLPS-Anp-3284 | Anas platyrhynchos | 52.94 | 4e-129 | 397 |
| LLPS-Poa-4068 | Pongo abelii | 51.94 | 0.0 | 546 |
| LLPS-Meg-0487 | Meleagris gallopavo | 51.07 | 9e-176 | 523 |
| LLPS-Ora-1950 | Ornithorhynchus anatinus | 47.83 | 2e-21 | 96.3 |
| LLPS-Cii-0365 | Ciona intestinalis | 38.02 | 1e-86 | 287 |