LLPS-Trv-0110
TRIVIDRAFT_212224
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | RuvB-like helicase |
Gene Name: | TRIVIDRAFT_212224 |
Ensembl Gene: | TRIVIDRAFT_212224 |
Ensembl Protein: | EHK24477 |
Organism: | Trichoderma virens |
Taxa ID: | 413071 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Cajal body, Nucleolus, Centrosome/Spindle pole body, Stress granule, Others | Predicted from orthologs | (View) |
▼ FUNCTION
DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | EHK24477 | EHK24477 |
UniProt | G9MMA8, G9MMA8_HYPVG | |
GeneBank | ABDF02000004 | EHK24477.1 |
RefSeq | XM_014103207.1 | XP_013958682.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAADLRGLNL IAAHSHIRGL GVDATSLEPR AASQGLVGQE KARKAAAVIL QMIKDGKIAG 60 61 RAVLIAGPPS TGKTAIATGM AQSLGADVPF TTLASSEIFS LEMSKTEALT QAFRKSIGVR 120 121 IKEESEIMEG EVVEIQIDRS VTGSAKQGKL TIKTTDMEAV YDMGAKMIDA MTKERVMAGD 180 181 IISIDKSSGK ITKLGRSYAR SRDYDAMGVD TKFLQCPDGE LQRRKEVIHT VTLHEIDVIN 240 241 SRTQGFLALF SGDTGEIRSE IRDQINTKVG EWKEEGKAEI VPGVLFIDEV HMLDIECFSY 300 301 INRALEDDLA PVVIMASNRG QSRIRGTDYK SPHGLPLDFL DRVVIINTHP YNSEEIQQIL 360 361 SIRAQEEEID VSADALALLT KIGQEAGLRY ASNLITTSQL VSAKRKSKQV GIDDVKRCFQ 420 421 LFYDPARSIE FVNKSEKRLI GNDGGVDLSV QNGGNNAAAA AGSETMDLS 469 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGCTG ACCTTCGCGG TCTGAACCTC ATCGCCGCGC ATTCTCACAT CCGTGGACTC 60 61 GGTGTCGATG CCACCAGTCT CGAGCCCAGA GCCGCGTCTC AGGGCCTTGT CGGCCAGGAA 120 121 AAGGCTCGAA AGGCTGCGGC AGTTATCCTT CAGATGATCA AGGATGGCAA GATTGCTGGT 180 181 CGCGCCGTCC TGATTGCTGG TCCGCCAAGC ACGGGAAAAA CTGCCATTGC TACTGGAATG 240 241 GCACAGTCAC TCGGCGCCGA CGTTCCCTTC ACGACACTCG CGTCCTCCGA AATCTTCTCC 300 301 CTCGAAATGT CGAAAACCGA GGCCCTCACC CAAGCCTTCC GCAAGTCAAT CGGCGTTCGC 360 361 ATCAAGGAGG AGAGCGAGAT CATGGAGGGA GAGGTTGTCG AGATCCAGAT CGACCGAAGC 420 421 GTCACCGGCA GTGCCAAGCA GGGCAAGCTG ACGATCAAGA CCACCGATAT GGAGGCCGTC 480 481 TATGACATGG GCGCAAAGAT GATTGATGCC ATGACCAAGG AGCGCGTCAT GGCCGGCGAT 540 541 ATCATTTCTA TCGACAAGTC CTCTGGAAAG ATTACTAAAC TCGGCCGATC ATACGCTCGA 600 601 TCTCGCGATT ACGATGCCAT GGGGGTTGAT ACCAAATTTT TGCAGTGCCC TGACGGCGAG 660 661 CTGCAAAGAC GCAAGGAGGT GATCCACACG GTGACGCTGC ACGAAATCGA TGTTATCAAC 720 721 TCGCGAACAC AGGGATTCCT TGCTCTTTTC TCTGGCGACA CCGGCGAGAT TCGCAGTGAG 780 781 ATCCGCGATC AGATTAACAC CAAGGTTGGC GAGTGGAAAG AGGAGGGCAA GGCTGAGATT 840 841 GTTCCCGGTG TGCTGTTCAT CGACGAGGTG CACATGCTTG ACATCGAATG CTTTTCTTAC 900 901 ATCAACCGAG CCCTTGAGGA CGATTTGGCG CCAGTCGTCA TCATGGCCAG CAACCGAGGC 960 961 CAGTCTCGCA TTCGAGGCAC CGACTACAAG AGCCCACACG GTCTACCCCT CGATTTCTTG 1020 1021 GATCGCGTTG TCATCATCAA CACGCATCCT TATAACTCAG AAGAAATCCA ACAGATCCTG 1080 1081 TCCATTCGAG CACAGGAGGA GGAGATTGAC GTTTCAGCAG ACGCTCTGGC CCTGCTTACC 1140 1141 AAGATTGGCC AAGAAGCCGG TCTTCGATAC GCCAGCAACC TCATCACCAC ATCGCAGCTG 1200 1201 GTCTCAGCGA AGAGAAAATC CAAGCAAGTT GGCATTGATG ATGTCAAGCG ATGCTTCCAG 1260 1261 CTCTTCTACG ACCCTGCCAG GAGTATCGAG TTTGTAAACA AATCCGAGAA GCGATTGATT 1320 1321 GGCAACGATG GTGGCGTCGA CCTGTCTGTC CAGAATGGTG GCAATAATGC TGCTGCCGCT 1380 1381 GCCGGCTCTG AGACTATGGA TTTGAGCTAG 1410 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Ino80 complex | |
Cellular Component | NuA4 histone acetyltransferase complex | |
Cellular Component | Nuclear telomeric heterochromatin | |
Cellular Component | R2TP complex | |
Cellular Component | Swr1 complex | |
Molecular Function | ATP binding | |
Molecular Function | ATP-dependent 3'-5' DNA helicase activity | |
Molecular Function | ATP-dependent 5'-3' DNA helicase activity | |
Biological Process | Box C/D snoRNP assembly | |
Biological Process | DNA repair | |
Biological Process | Histone exchange | |
Biological Process | Regulation of transcription by RNA polymerase II | |
Biological Process | RRNA processing |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Trr-0507 | Trichoderma reesei | 97.45 | 0.0 | 855 |
LLPS-Fuo-0272 | Fusarium oxysporum | 93.74 | 0.0 | 800 |
LLPS-Fuv-0290 | Fusarium verticillioides | 93.74 | 0.0 | 800 |
LLPS-Beb-0921 | Beauveria bassiana | 92.17 | 0.0 | 796 |
LLPS-Ved-0006 | Verticillium dahliae | 91.28 | 0.0 | 783 |
LLPS-Fus-0566 | Fusarium solani | 90.99 | 0.0 | 796 |
LLPS-Cogr-0911 | Colletotrichum graminicola | 90.38 | 0.0 | 776 |
LLPS-Coo-0721 | Colletotrichum orbiculare | 89.06 | 0.0 | 785 |
LLPS-Map-0188 | Magnaporthe poae | 89.04 | 0.0 | 765 |
LLPS-Gag-0334 | Gaeumannomyces graminis | 88.81 | 0.0 | 760 |
LLPS-Cog-0220 | Colletotrichum gloeosporioides | 88.63 | 0.0 | 778 |
LLPS-Mao-0609 | Magnaporthe oryzae | 88.59 | 0.0 | 741 |
LLPS-Nec-0162 | Neurospora crassa | 88.39 | 0.0 | 766 |
LLPS-Scs-0579 | Sclerotinia sclerotiorum | 88.14 | 0.0 | 766 |
LLPS-Nef-0042 | Neosartorya fischeri | 84.3 | 0.0 | 736 |
LLPS-Ast-0791 | Aspergillus terreus | 84.3 | 0.0 | 737 |
LLPS-Asfu-0383 | Aspergillus fumigatus | 84.08 | 0.0 | 736 |
LLPS-Asf-0374 | Aspergillus flavus | 83.86 | 0.0 | 732 |
LLPS-Asni-0167 | Aspergillus niger | 83.82 | 0.0 | 730 |
LLPS-Asc-0013 | Aspergillus clavatus | 83.63 | 0.0 | 732 |
LLPS-Pytr-0517 | Pyrenophora triticirepentis | 83.52 | 0.0 | 733 |
LLPS-Pyt-0690 | Pyrenophora teres | 83.52 | 0.0 | 733 |
LLPS-Lem-0150 | Leptosphaeria maculans | 83.45 | 0.0 | 726 |
LLPS-Asn-1091 | Aspergillus nidulans | 82.96 | 0.0 | 723 |
LLPS-Blg-0499 | Blumeria graminis | 82.96 | 0.0 | 725 |
LLPS-Dos-0437 | Dothistroma septosporum | 79.91 | 0.0 | 692 |
LLPS-Zyt-0084 | Zymoseptoria tritici | 79.46 | 0.0 | 692 |
LLPS-Phn-0024 | Phaeosphaeria nodorum | 79.27 | 0.0 | 711 |
LLPS-Tum-0705 | Tuber melanosporum | 78.2 | 0.0 | 666 |
LLPS-Myl-0013 | Myotis lucifugus | 73.71 | 4e-109 | 331 |
LLPS-Yal-0176 | Yarrowia lipolytica | 72.04 | 0.0 | 645 |
LLPS-Asg-0078 | Ashbya gossypii | 71.91 | 0.0 | 631 |
LLPS-Tar-0411 | Takifugu rubripes | 71.69 | 1e-155 | 453 |
LLPS-Miv-0195 | Microbotryum violaceum | 71.62 | 0.0 | 616 |
LLPS-Kop-0259 | Komagataella pastoris | 71.46 | 0.0 | 613 |
LLPS-Sac-0315 | Saccharomyces cerevisiae | 71.43 | 0.0 | 637 |
LLPS-Hea-0554 | Helianthus annuus | 70.07 | 0.0 | 587 |
LLPS-Abg-0480 | Absidia glauca | 70.0 | 0.0 | 603 |
LLPS-Dac-0348 | Daucus carota | 69.61 | 0.0 | 567 |
LLPS-Gor-1803 | Gossypium raimondii | 68.54 | 0.0 | 584 |
LLPS-Anc-1614 | Anolis carolinensis | 68.48 | 0.0 | 593 |
LLPS-Scp-0245 | Schizosaccharomyces pombe | 68.42 | 0.0 | 598 |
LLPS-Xim-0122 | Xiphophorus maculatus | 68.25 | 0.0 | 572 |
LLPS-Coc-1380 | Corchorus capsularis | 68.07 | 0.0 | 585 |
LLPS-Thc-0607 | Theobroma cacao | 68.07 | 0.0 | 583 |
LLPS-Glm-0559 | Glycine max | 68.02 | 0.0 | 583 |
LLPS-Cus-1038 | Cucumis sativus | 68.02 | 0.0 | 565 |
LLPS-Aim-0161 | Ailuropoda melanoleuca | 67.9 | 0.0 | 578 |
LLPS-Spr-0393 | Sporisorium reilianum | 67.89 | 0.0 | 594 |
LLPS-Xet-1640 | Xenopus tropicalis | 67.87 | 0.0 | 597 |
LLPS-Lac-1465 | Latimeria chalumnae | 67.8 | 0.0 | 588 |
LLPS-Icp-0800 | Ictalurus punctatus | 67.8 | 0.0 | 572 |
LLPS-Php-0160 | Physcomitrella patens | 67.65 | 0.0 | 580 |
LLPS-Orn-0380 | Oreochromis niloticus | 67.57 | 0.0 | 569 |
LLPS-Pug-0378 | Puccinia graminis | 67.57 | 0.0 | 595 |
LLPS-Gaga-0073 | Gallus gallus | 67.57 | 0.0 | 587 |
LLPS-Pof-1021 | Poecilia formosa | 67.56 | 0.0 | 573 |
LLPS-Brr-1137 | Brassica rapa | 67.52 | 0.0 | 573 |
LLPS-Bro-0549 | Brassica oleracea | 67.52 | 0.0 | 573 |
LLPS-Scj-0039 | Schizosaccharomyces japonicus | 67.5 | 0.0 | 585 |
LLPS-Poa-0285 | Pongo abelii | 67.48 | 0.0 | 545 |
LLPS-Usm-0507 | Ustilago maydis | 67.43 | 0.0 | 590 |
LLPS-Mae-2189 | Manihot esculenta | 67.42 | 0.0 | 560 |
LLPS-Dar-1958 | Danio rerio | 67.35 | 0.0 | 570 |
LLPS-Cap-0417 | Cavia porcellus | 67.35 | 0.0 | 583 |
LLPS-Fud-0389 | Fukomys damarensis | 67.35 | 0.0 | 583 |
LLPS-Dio-0674 | Dipodomys ordii | 67.35 | 0.0 | 583 |
LLPS-Met-1702 | Medicago truncatula | 67.34 | 0.0 | 577 |
LLPS-Nia-0210 | Nicotiana attenuata | 67.19 | 0.0 | 580 |
LLPS-Otg-0053 | Otolemur garnettii | 67.12 | 0.0 | 581 |
LLPS-Rhb-1238 | Rhinopithecus bieti | 67.12 | 0.0 | 582 |
LLPS-Orc-0729 | Oryctolagus cuniculus | 67.12 | 0.0 | 582 |
LLPS-Mod-0597 | Monodelphis domestica | 67.12 | 0.0 | 582 |
LLPS-Fec-0570 | Felis catus | 67.12 | 0.0 | 582 |
LLPS-Hos-2560 | Homo sapiens | 67.12 | 0.0 | 582 |
LLPS-Urm-1557 | Ursus maritimus | 67.12 | 0.0 | 582 |
LLPS-Pap-0791 | Pan paniscus | 67.12 | 0.0 | 582 |
LLPS-Pat-1517 | Pan troglodytes | 67.12 | 0.0 | 582 |
LLPS-Man-2304 | Macaca nemestrina | 67.12 | 0.0 | 582 |
LLPS-Cas-1190 | Carlito syrichta | 67.12 | 0.0 | 582 |
LLPS-Ict-0433 | Ictidomys tridecemlineatus | 67.12 | 0.0 | 582 |
LLPS-Eqc-0366 | Equus caballus | 67.12 | 0.0 | 582 |
LLPS-Caf-0238 | Canis familiaris | 67.12 | 0.0 | 582 |
LLPS-Prp-0773 | Prunus persica | 67.12 | 0.0 | 558 |
LLPS-Mam-1132 | Macaca mulatta | 67.12 | 0.0 | 582 |
LLPS-Gog-0538 | Gorilla gorilla | 67.12 | 0.0 | 582 |
LLPS-Asm-1348 | Astyanax mexicanus | 67.12 | 0.0 | 582 |
LLPS-Chs-0060 | Chlorocebus sabaeus | 67.12 | 0.0 | 582 |
LLPS-Mum-0554 | Mus musculus | 67.12 | 0.0 | 582 |
LLPS-Maf-0596 | Macaca fascicularis | 67.12 | 0.0 | 579 |
LLPS-Mea-0285 | Mesocricetus auratus | 67.12 | 0.0 | 581 |
LLPS-Sus-0612 | Sus scrofa | 67.12 | 0.0 | 582 |
LLPS-Cea-0329 | Cercocebus atys | 67.12 | 0.0 | 580 |
LLPS-Aon-2355 | Aotus nancymaae | 67.12 | 0.0 | 582 |
LLPS-Ran-1582 | Rattus norvegicus | 67.12 | 0.0 | 582 |
LLPS-Chc-1105 | Chondrus crispus | 67.12 | 0.0 | 545 |
LLPS-Ova-0695 | Ovis aries | 67.12 | 0.0 | 582 |
LLPS-Mup-1435 | Mustela putorius furo | 67.12 | 0.0 | 582 |
LLPS-Mal-1471 | Mandrillus leucophaeus | 67.12 | 0.0 | 579 |
LLPS-Paa-0398 | Papio anubis | 67.12 | 0.0 | 579 |
LLPS-Bot-1184 | Bos taurus | 67.12 | 0.0 | 581 |
LLPS-Art-0872 | Arabidopsis thaliana | 67.05 | 0.0 | 571 |
LLPS-Mel-0719 | Melampsora laricipopulina | 67.04 | 0.0 | 592 |
LLPS-Orl-1845 | Oryzias latipes | 66.89 | 0.0 | 566 |
LLPS-Arl-1326 | Arabidopsis lyrata | 66.82 | 0.0 | 570 |
LLPS-Gaa-0101 | Gasterosteus aculeatus | 66.74 | 0.0 | 565 |
LLPS-Nol-0480 | Nomascus leucogenys | 66.67 | 0.0 | 577 |
LLPS-Amt-0063 | Amborella trichopoda | 66.52 | 0.0 | 571 |
LLPS-Via-0550 | Vigna angularis | 66.44 | 0.0 | 577 |
LLPS-Sot-0320 | Solanum tuberosum | 66.29 | 0.0 | 575 |
LLPS-Scc-0247 | Schizosaccharomyces cryophilus | 66.28 | 0.0 | 586 |
LLPS-Caj-1248 | Callithrix jacchus | 66.21 | 0.0 | 574 |
LLPS-Leo-2092 | Lepisosteus oculatus | 66.21 | 0.0 | 542 |
LLPS-Scf-2453 | Scleropages formosus | 66.21 | 0.0 | 563 |
LLPS-Sem-0229 | Selaginella moellendorffii | 66.06 | 0.0 | 543 |
LLPS-Sol-0288 | Solanum lycopersicum | 66.06 | 0.0 | 573 |
LLPS-Phv-0108 | Phaseolus vulgaris | 65.99 | 0.0 | 575 |
LLPS-Cii-0237 | Ciona intestinalis | 65.9 | 0.0 | 554 |
LLPS-Chr-0555 | Chlamydomonas reinhardtii | 65.84 | 0.0 | 572 |
LLPS-Ten-0934 | Tetraodon nigroviridis | 65.76 | 0.0 | 570 |
LLPS-Osl-0422 | Ostreococcus lucimarinus | 65.26 | 0.0 | 543 |
LLPS-Pot-0629 | Populus trichocarpa | 64.94 | 0.0 | 564 |
LLPS-Vir-0171 | Vigna radiata | 64.88 | 2e-143 | 424 |
LLPS-Drm-0931 | Drosophila melanogaster | 64.79 | 0.0 | 544 |
LLPS-Tru-0179 | Triticum urartu | 64.56 | 4e-180 | 518 |
LLPS-Brd-0323 | Brachypodium distachyon | 64.48 | 0.0 | 552 |
LLPS-Tra-0252 | Triticum aestivum | 64.19 | 0.0 | 552 |
LLPS-Cis-1206 | Ciona savignyi | 63.99 | 6e-135 | 400 |
LLPS-Tut-0917 | Tursiops truncatus | 63.49 | 0.0 | 532 |
LLPS-Sob-0378 | Sorghum bicolor | 63.08 | 0.0 | 556 |
LLPS-Sei-1710 | Setaria italica | 63.08 | 0.0 | 554 |
LLPS-Orb-0517 | Oryza barthii | 63.07 | 2e-128 | 382 |
LLPS-Orp-1212 | Oryza punctata | 63.03 | 8e-157 | 457 |
LLPS-Crn-0032 | Cryptococcus neoformans | 63.03 | 0.0 | 566 |
LLPS-Zem-0817 | Zea mays | 62.64 | 0.0 | 548 |
LLPS-Orbr-0425 | Oryza brachyantha | 62.56 | 0.0 | 548 |
LLPS-Ors-0205 | Oryza sativa | 62.56 | 0.0 | 552 |
LLPS-Org-0712 | Oryza glaberrima | 62.56 | 0.0 | 552 |
LLPS-Orr-0418 | Oryza rufipogon | 62.56 | 0.0 | 552 |
LLPS-Orm-0527 | Oryza meridionalis | 62.56 | 0.0 | 552 |
LLPS-Orni-0232 | Oryza nivara | 62.56 | 0.0 | 552 |
LLPS-Orgl-0979 | Oryza glumaepatula | 62.56 | 0.0 | 548 |
LLPS-Lep-0279 | Leersia perrieri | 62.23 | 0.0 | 551 |
LLPS-Gas-0621 | Galdieria sulphuraria | 61.8 | 0.0 | 538 |
LLPS-Loa-1046 | Loxodonta africana | 61.09 | 2e-176 | 510 |
LLPS-Put-0238 | Puccinia triticina | 59.64 | 4e-165 | 484 |
LLPS-Ori-1018 | Oryza indica | 58.37 | 6e-172 | 499 |
LLPS-Mua-0398 | Musa acuminata | 56.89 | 7e-155 | 454 |
LLPS-Cym-0086 | Cyanidioschyzon merolae | 56.14 | 8e-164 | 479 |
LLPS-Cae-0051 | Caenorhabditis elegans | 55.17 | 8e-161 | 470 |
LLPS-Brn-0987 | Brassica napus | 54.78 | 3e-123 | 369 |
LLPS-Fia-0119 | Ficedula albicollis | 42.83 | 2e-102 | 321 |
LLPS-Meg-0758 | Meleagris gallopavo | 42.83 | 3e-103 | 323 |
LLPS-Tag-1172 | Taeniopygia guttata | 42.83 | 2e-102 | 321 |
LLPS-Hov-0166 | Hordeum vulgare | 42.44 | 4e-103 | 324 |