LLPS-Tra-1596
TUBA-2A
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Tubulin alpha chain |
Gene Name: | TUBA-2A, TUBA-2B, TUBA-2D |
Ensembl Gene: | TraesCS1A02G350200 |
Ensembl Protein: | TraesCS1A02G350200.3 |
Organism: | Triticum aestivum |
Taxa ID: | 4565 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | TraesCS1A02G350200.3 | TraesCS1A02G350200.3 |
Ensembl | TraesCS1A02G350200.2 | TraesCS1A02G350200.2 |
Ensembl | TraesCS1A02G350200.1 | TraesCS1A02G350200.1 |
Ensembl | TraesCS1A02G350200.4 | TraesCS1A02G350200.4 |
UniProt | A4K4Y1, A4K4Y1_WHEAT | |
GeneBank | DQ435661, DQ435660, DQ435659 | ABD92931.1, ABD92930.1, ABD92932.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MRECISIHIG QAGIQVGNAC WELYCLEHGI QPDGQMPGDK TVGGGDDAFN TFFSETGAGK 60 61 HVPRAVFVDL EPTVIDEVRT GAYRQLFHPE QLISGKEDAA NNFARGHYTI GKEIVDLCLD 120 121 RIRKLSDNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT VYPSPQVSTS 180 181 VVEPYNSVLS THSLLEHTDV SILLDNEAIY DICRRSLDIE RPTYTNLNRL VSQVISSLTA 240 241 SLRFDGALNV DVNEFQTNLV PYPRIHFMLS SYAPVISAEK AYHEQLSVAE ITNSAFEPSS 300 301 MMAKCDPRHG KYMACCLMYR GDVVPKDVNA AVATIKTKRT IQFVDWCPTG FKCGINYQPP 360 361 GVVPGGDLAK VQRAVCMISN STSVVEVFSR IDHKFDLMYA KRAFVHWYVG EGMEEGEFSE 420 421 AREDLAALEK DYEEVGAEFD EGEDGDEGDE Y 451 |
Nucleotide CDS Sequence (FASTA) |
1 ATGAGGGAGT GCATCTCGAT CCACATCGGC CAGGCCGGCA TCCAGGTCGG GAACGCGTGC 60 61 TGGGAGCTCT ACTGCCTCGA GCATGGCATT CAGCCTGATG GCCAGATGCC CGGTGACAAG 120 121 ACCGTTGGGG GAGGTGATGA TGCTTTCAAC ACCTTCTTCA GCGAGACTGG GGCTGGGAAG 180 181 CACGTCCCCC GTGCTGTCTT CGTAGATCTC GAGCCCACTG TGATTGATGA GGTGAGGACT 240 241 GGCGCTTACC GCCAGCTCTT CCACCCTGAG CAGCTTATCA GTGGCAAGGA GGATGCAGCC 300 301 AACAACTTCG CCCGTGGTCA TTACACCATT GGCAAGGAGA TTGTTGATCT GTGCCTTGAC 360 361 CGTATCAGGA AGCTTTCAGA CAACTGCACT GGTCTCCAGG GATTCCTTGT CTTCAACGCT 420 421 GTTGGAGGTG GAACTGGCTC TGGCCTTGGT TCTCTTCTGC TGGAGCGCCT CTCTGTTGAC 480 481 TATGGAAAGA AGTCCAAGCT TGGGTTCACA GTGTACCCAT CACCCCAGGT CTCCACCTCT 540 541 GTTGTTGAGC CATACAACAG TGTCCTGTCC ACCCACTCCC TCCTTGAGCA CACTGATGTG 600 601 TCTATCCTTC TTGACAATGA GGCCATCTAT GACATCTGCC GCCGCTCCCT TGACATTGAG 660 661 CGCCCAACAT ACACCAACCT CAACAGGCTT GTTTCTCAGA CCAACTTGGT GCCCTACCCG 720 721 AGGATCCACT TCATGCTTTC CTCCTATGCC CCAGTGATCT CAGCTGAGAA GGCCTACCAT 780 781 GAGCAGCTGT CTGTTGCTGA GATCACCAAC AGCGCCTTTG AGCCTTCATC TATGATGGCC 840 841 AAGTGTGACC CCCGCCACGG CAAGTACATG GCCTGCTGTC TCATGTACCG TGGTGATGTT 900 901 GTTCCCAAGG ATGTCAACGC TGCTGTGGCC ACCATCAAGA CCAAGCGCAC TATCCAGTTT 960 961 GTTGACTGGT GCCCCACTGG CTTCAAGTGT GGTATCAACT ACCAGCCACC AGGTGTTGTC 1020 1021 CCAGGTGGTG ACCTTGCCAA GGTCCAGAGG GCTGTGTGCA TGATCTCCAA CTCCACCAGT 1080 1081 GTCGTCGAGG TCTTCTCCCG CATTGACCAC AAGTTTGACC TCATGTACGC CAAGCGTGCC 1140 1141 TTCGTCCACT GGTACGTCGG TGAGGGCATG GAGGAGGGAG AGTTCTCTGA GGCCCGTGAG 1200 1201 GATCTTGCTG CCCTGGAGAA GGACTATGAA GAAGTTGGTG CTGAGTTCGA CGAGGGTGAG 1260 1261 GACGGTGACG AGGGCGACGA GTACTAG 1287 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cytoplasm | |
Cellular Component | Microtubule | |
Molecular Function | GTP binding | |
Molecular Function | GTPase activity | |
Molecular Function | Structural constituent of cytoskeleton | |
Biological Process | Microtubule-based process |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Hov-2119 | Hordeum vulgare | 100.0 | 0.0 | 863 |
LLPS-Tru-1941 | Triticum urartu | 100.0 | 0.0 | 863 |
LLPS-Lep-1110 | Leersia perrieri | 99.07 | 0.0 | 858 |
LLPS-Orbr-2152 | Oryza brachyantha | 98.84 | 0.0 | 857 |
LLPS-Met-1864 | Medicago truncatula | 98.61 | 0.0 | 855 |
LLPS-Sob-1031 | Sorghum bicolor | 98.61 | 0.0 | 854 |
LLPS-Orgl-1631 | Oryza glumaepatula | 98.38 | 0.0 | 850 |
LLPS-Glm-2992 | Glycine max | 98.38 | 0.0 | 853 |
LLPS-Orb-2303 | Oryza barthii | 98.38 | 0.0 | 850 |
LLPS-Ori-2327 | Oryza indica | 98.38 | 0.0 | 850 |
LLPS-Orni-0878 | Oryza nivara | 98.38 | 0.0 | 850 |
LLPS-Orr-0647 | Oryza rufipogon | 98.38 | 0.0 | 850 |
LLPS-Orm-1731 | Oryza meridionalis | 98.38 | 0.0 | 850 |
LLPS-Org-2214 | Oryza glaberrima | 98.38 | 0.0 | 850 |
LLPS-Zem-2565 | Zea mays | 98.38 | 0.0 | 854 |
LLPS-Ors-1178 | Oryza sativa | 98.38 | 0.0 | 850 |
LLPS-Via-1000 | Vigna angularis | 98.15 | 0.0 | 848 |
LLPS-Cus-0944 | Cucumis sativus | 98.15 | 0.0 | 850 |
LLPS-Vir-1071 | Vigna radiata | 98.15 | 0.0 | 848 |
LLPS-Thc-0065 | Theobroma cacao | 98.15 | 0.0 | 851 |
LLPS-Prp-2376 | Prunus persica | 98.15 | 0.0 | 851 |
LLPS-Pot-1471 | Populus trichocarpa | 98.15 | 0.0 | 852 |
LLPS-Orp-1555 | Oryza punctata | 98.15 | 0.0 | 850 |
LLPS-Mae-1818 | Manihot esculenta | 98.15 | 0.0 | 851 |
LLPS-Amt-0703 | Amborella trichopoda | 98.15 | 0.0 | 852 |
LLPS-Sol-2173 | Solanum lycopersicum | 97.92 | 0.0 | 852 |
LLPS-Sem-0429 | Selaginella moellendorffii | 97.92 | 0.0 | 849 |
LLPS-Brn-2513 | Brassica napus | 97.92 | 0.0 | 849 |
LLPS-Php-0654 | Physcomitrella patens | 97.92 | 0.0 | 850 |
LLPS-Viv-1837 | Vitis vinifera | 97.92 | 0.0 | 847 |
LLPS-Gor-2538 | Gossypium raimondii | 97.92 | 0.0 | 851 |
LLPS-Art-1057 | Arabidopsis thaliana | 97.92 | 0.0 | 849 |
LLPS-Brd-0075 | Brachypodium distachyon | 97.69 | 0.0 | 845 |
LLPS-Arl-1010 | Arabidopsis lyrata | 97.69 | 0.0 | 846 |
LLPS-Dac-0916 | Daucus carota | 97.69 | 0.0 | 847 |
LLPS-Coc-1608 | Corchorus capsularis | 97.69 | 0.0 | 847 |
LLPS-Bro-2387 | Brassica oleracea | 97.69 | 0.0 | 846 |
LLPS-Brr-2564 | Brassica rapa | 97.69 | 0.0 | 846 |
LLPS-Nia-2478 | Nicotiana attenuata | 97.69 | 0.0 | 851 |
LLPS-Hea-2650 | Helianthus annuus | 97.45 | 0.0 | 847 |
LLPS-Phv-0112 | Phaseolus vulgaris | 97.45 | 0.0 | 847 |
LLPS-Sot-1554 | Solanum tuberosum | 96.76 | 0.0 | 842 |
LLPS-Sei-0199 | Setaria italica | 94.91 | 0.0 | 823 |
LLPS-Chr-1284 | Chlamydomonas reinhardtii | 93.06 | 0.0 | 824 |
LLPS-Osl-0496 | Ostreococcus lucimarinus | 92.59 | 0.0 | 823 |
LLPS-Pes-2445 | Pelodiscus sinensis | 89.76 | 7e-77 | 256 |
LLPS-Bot-0312 | Bos taurus | 85.42 | 0.0 | 779 |
LLPS-Scf-2328 | Scleropages formosus | 85.19 | 0.0 | 780 |
LLPS-Chs-1539 | Chlorocebus sabaeus | 85.19 | 0.0 | 778 |
LLPS-Fud-4403 | Fukomys damarensis | 85.19 | 0.0 | 780 |
LLPS-Asm-0148 | Astyanax mexicanus | 85.19 | 0.0 | 780 |
LLPS-Icp-1141 | Ictalurus punctatus | 85.19 | 0.0 | 780 |
LLPS-Dar-3733 | Danio rerio | 85.19 | 0.0 | 780 |
LLPS-Mal-2039 | Mandrillus leucophaeus | 85.15 | 0.0 | 775 |
LLPS-Paa-2748 | Papio anubis | 85.15 | 0.0 | 775 |
LLPS-Maf-0209 | Macaca fascicularis | 85.15 | 0.0 | 775 |
LLPS-Gog-3093 | Gorilla gorilla | 85.15 | 0.0 | 775 |
LLPS-Poa-3265 | Pongo abelii | 85.15 | 0.0 | 776 |
LLPS-Mam-0805 | Macaca mulatta | 85.15 | 0.0 | 775 |
LLPS-Hos-1672 | Homo sapiens | 85.15 | 0.0 | 775 |
LLPS-Pat-0458 | Pan troglodytes | 85.15 | 0.0 | 775 |
LLPS-Lac-1000 | Latimeria chalumnae | 85.15 | 0.0 | 778 |
LLPS-Orc-3307 | Oryctolagus cuniculus | 85.15 | 0.0 | 776 |
LLPS-Xim-1672 | Xiphophorus maculatus | 84.95 | 0.0 | 778 |
LLPS-Drm-0758 | Drosophila melanogaster | 84.95 | 0.0 | 775 |
LLPS-Dio-2079 | Dipodomys ordii | 84.95 | 0.0 | 777 |
LLPS-Ran-1850 | Rattus norvegicus | 84.95 | 0.0 | 777 |
LLPS-Cii-0592 | Ciona intestinalis | 84.95 | 0.0 | 777 |
LLPS-Mum-4242 | Mus musculus | 84.95 | 0.0 | 778 |
LLPS-Sus-3651 | Sus scrofa | 84.95 | 0.0 | 777 |
LLPS-Ten-2970 | Tetraodon nigroviridis | 84.95 | 0.0 | 778 |
LLPS-Cap-3401 | Cavia porcellus | 84.95 | 0.0 | 778 |
LLPS-Gaga-2212 | Gallus gallus | 84.95 | 0.0 | 777 |
LLPS-Anc-2036 | Anolis carolinensis | 84.95 | 0.0 | 777 |
LLPS-Pap-4472 | Pan paniscus | 84.95 | 0.0 | 778 |
LLPS-Urm-3000 | Ursus maritimus | 84.95 | 0.0 | 778 |
LLPS-Mod-1950 | Monodelphis domestica | 84.95 | 0.0 | 778 |
LLPS-Fec-0466 | Felis catus | 84.95 | 0.0 | 778 |
LLPS-Tut-0018 | Tursiops truncatus | 84.92 | 0.0 | 775 |
LLPS-Myl-1343 | Myotis lucifugus | 84.92 | 0.0 | 775 |
LLPS-Ora-0959 | Ornithorhynchus anatinus | 84.92 | 0.0 | 776 |
LLPS-Leo-3078 | Lepisosteus oculatus | 84.92 | 0.0 | 776 |
LLPS-Aon-0811 | Aotus nancymaae | 84.92 | 0.0 | 775 |
LLPS-Caj-2133 | Callithrix jacchus | 84.92 | 0.0 | 776 |
LLPS-Caf-1216 | Canis familiaris | 84.92 | 0.0 | 776 |
LLPS-Cas-1839 | Carlito syrichta | 84.92 | 0.0 | 776 |
LLPS-Meg-1613 | Meleagris gallopavo | 84.92 | 0.0 | 776 |
LLPS-Man-1838 | Macaca nemestrina | 84.92 | 0.0 | 775 |
LLPS-Mup-0654 | Mustela putorius furo | 84.72 | 0.0 | 776 |
LLPS-Cea-1318 | Cercocebus atys | 84.72 | 0.0 | 776 |
LLPS-Eqc-0069 | Equus caballus | 84.72 | 0.0 | 776 |
LLPS-Nol-2673 | Nomascus leucogenys | 84.72 | 0.0 | 776 |
LLPS-Ict-2143 | Ictidomys tridecemlineatus | 84.72 | 0.0 | 776 |
LLPS-Pof-3465 | Poecilia formosa | 84.72 | 0.0 | 776 |
LLPS-Scm-0904 | Scophthalmus maximus | 84.72 | 0.0 | 777 |
LLPS-Loa-1707 | Loxodonta africana | 84.72 | 0.0 | 770 |
LLPS-Fia-2663 | Ficedula albicollis | 84.72 | 0.0 | 777 |
LLPS-Ere-0436 | Erinaceus europaeus | 84.69 | 0.0 | 774 |
LLPS-Aim-3885 | Ailuropoda melanoleuca | 84.69 | 0.0 | 771 |
LLPS-Anp-1080 | Anas platyrhynchos | 84.69 | 0.0 | 772 |
LLPS-Otg-3152 | Otolemur garnettii | 84.69 | 0.0 | 773 |
LLPS-Mea-1952 | Mesocricetus auratus | 84.49 | 0.0 | 772 |
LLPS-Xet-0144 | Xenopus tropicalis | 84.49 | 0.0 | 776 |
LLPS-Ova-0174 | Ovis aries | 84.26 | 0.0 | 776 |
LLPS-Orl-0238 | Oryzias latipes | 84.26 | 0.0 | 775 |
LLPS-Tar-1284 | Takifugu rubripes | 83.8 | 0.0 | 772 |
LLPS-Gaa-2776 | Gasterosteus aculeatus | 83.56 | 0.0 | 771 |
LLPS-Cis-1540 | Ciona savignyi | 83.56 | 0.0 | 772 |