LLPS-Thc-2139
TCM_030609
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Sequence-specific DNA binding,sequence-specific DNA binding transcription factors, putative isoform 1 |
| Gene Name: | TCM_030609 |
| Ensembl Gene: | TCM_030609 |
| Ensembl Protein: | EOY11983 |
| Organism: | Theobroma cacao |
| Taxa ID: | 3641 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EOY11983 | EOY11983 |
| Ensembl | EOY11981 | EOY11981 |
| Ensembl | EOY11982 | EOY11982 |
| UniProt | A0A061F4L8, A0A061F4L8_THECC | |
| GeneBank | CM001885 | EOY11981.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGSDRSLFIP PHVAKLLYLV SFGQVHPWLL IQVTHLPSRT TLRSSNPFLS RSLYPQKRTL 60 61 GQVGKEKSSC SHGGYWVISI LTLQNIPRVF SYSIPIWVFI RLFTSRFLNM RQGKEEAVCS 120 121 VEQAIDLISV VKEIHGLSAK EINKLLRDSE NFTIHFVTEK GSEVKIDVEK LAGCLPLHLI 180 181 AVLMSSDRDE ALLRYLLCGI RLLHSLCELA PRHTKLEQSL LDDVKVSEQL IDLVFYVLVV 240 241 LNDYRQDIHK SSPVPLLHSA LVACSLYLLT GCISSQWQDL ALVIVAHPKV DMFMDVACRA 300 301 VHLVVRFLQN KLSAEHTDIC AKLSPTAEFI VNYLCQQCEA SLQFLQLLCQ QKPFRERLLR 360 361 NKELCGKGGI LFLAQSILKL HAPYFVESST VMAALSRMKA KVLSILLNLC EAESISYLDE 420 421 VASSPGSLDL AKSVALEVLE LLKTGLSKDP KQLTASSDRT YPMGLLQLNA MRLADIFSDD 480 481 SNFRSYITVH FTDFLSAIFS LSHGDFLSMW CSADLPVREE DGTLYYEIFP AVGWALESLS 540 541 SSDLTNTRDL YFNFIYNNMS QASYVHQRTS LFVKVIANLH CFVPNICEEQ ERNLFLHKFL 600 601 GCLRNDPSKL LPSFIFVSGP QKAAAIYRNL RSLLSHAESL IPTFLNEDDL QLLRVFFDQL 660 661 QSLINPAEFE ENRVQEDRSL GGCSSPLLRT EPPNRNNRNG NLKEEMSENS AFQEEEQCYV 720 721 RSNHMDQADD ITRQDMMDDK DKSVTPIGLK EIDRDVQNVE TSGSDTSSTK GKNAVDKLVE 780 781 RLRDSTPAGV REDEKVETVQ TEEKQRRKRK RTIMNDEQVT IIERALLDEP EMQRNTASIQ 840 841 SWADKLCHHG SEVTCSQLRN WLNNRKARLA RASKDARPPP EPDNAFAGKQ GGPQPGHPFK 900 901 APDSSGEEAA PSNTRGTRSM SRISTSENPE APEFVDFGAA EFVQCKPGQF VVLVDGRGEE 960 961 IGKGKVHQVQ GKWCGKSLEE SGTCVVDAVD LKADKWVKLP YPSEATGTSF EEAETKFGVM 1020 1021 RVMWDSNKIF LLRPQ 1035 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGGCAAG GCAAGGAAGA AGCAGTATGC AGTGTTGAAC AGGCCATTGA CTTGATTTCA 60 61 GTGGTGAAGG AGATTCATGG GCTTAGTGCA AAGGAGATTA ATAAGTTGCT GAGAGACTCC 120 121 GAAAATTTTA CCATTCACTT TGTTACTGAA AAAGGATCAG AAGTAAAGAT TGATGTGGAA 180 181 AAACTTGCAG GATGTCTTCC TTTGCACCTT ATTGCAGTGC TCATGTCATC TGATAGAGAT 240 241 GAAGCGCTGC TCCGATATTT ACTATGTGGC ATCCGGCTTT TACATTCCTT GTGCGAATTA 300 301 GCCCCTCGCC ACACTAAACT TGAGCAGAGT TTGCTTGATG ATGTAAAAGT ATCAGAACAG 360 361 CTGATTGATC TGGTCTTTTA TGTGCTGGTT GTTCTCAATG ATTACAGACA GGACATCCAT 420 421 AAATCAAGTC CTGTGCCTCT TTTACATTCA GCACTTGTGG CATGCAGTCT GTATCTATTG 480 481 ACTGGATGTA TATCTTCACA GTGGCAAGAT CTGGCACTAG TGATAGTGGC ACATCCTAAG 540 541 GTTGACATGT TTATGGATGT AGCTTGCAGA GCTGTTCATC TAGTTGTCAG GTTTCTCCAA 600 601 AACAAGCTGT CTGCTGAGCA TACTGATATC TGTGCAAAGT TGAGTCCAAC TGCTGAATTC 660 661 ATAGTTAACT ATCTTTGCCA ACAATGTGAG GCTTCTTTAC AGTTCCTTCA GTTATTGTGC 720 721 CAACAGAAAC CATTTCGGGA GCGCTTACTG AGGAATAAGG AACTATGCGG AAAGGGTGGT 780 781 ATTCTTTTTC TGGCTCAATC CATCCTGAAG TTGCATGCAC CTTATTTTGT AGAATCTTCC 840 841 ACGGTCATGG CTGCATTATC TAGGATGAAA GCTAAAGTTC TGTCAATTTT ATTGAATTTG 900 901 TGTGAAGCAG AAAGCATTTC TTATCTTGAT GAGGTTGCCA GCTCTCCAGG AAGCCTGGAT 960 961 TTGGCAAAGT CTGTTGCACT TGAGGTCCTT GAGTTGTTGA AGACTGGACT CAGTAAAGAT 1020 1021 CCCAAGCAGC TCACTGCTAG TTCTGATAGA ACCTATCCTA TGGGGCTTCT GCAACTTAAT 1080 1081 GCAATGCGTC TAGCTGATAT CTTCTCTGAT GATTCAAACT TTCGATCTTA CATCACTGTG 1140 1141 CACTTTACTG ACTTTTTGAG TGCAATATTT TCACTCTCTC ATGGAGATTT TCTATCCATG 1200 1201 TGGTGTTCGG CTGATCTCCC TGTAAGGGAA GAAGATGGTA CCCTGTATTA TGAAATATTT 1260 1261 CCTGCAGTTG GATGGGCTTT AGAGTCACTT TCATCATCAG ACCTAACAAA TACAAGAGAT 1320 1321 CTGTATTTCA ATTTTATTTA TAACAACATG TCTCAAGCAT CCTATGTACA TCAAAGAACA 1380 1381 TCTTTATTTG TCAAAGTAAT TGCAAACCTC CATTGTTTTG TTCCAAACAT CTGTGAAGAG 1440 1441 CAGGAGAGGA ACCTCTTCCT TCACAAATTT CTTGGATGCT TGCGAAACGA TCCATCTAAG 1500 1501 CTATTACCCA GTTTTATCTT TGTCTCTGGT CCACAAAAGG CTGCTGCTAT TTACAGGAAC 1560 1561 CTGCGTTCCC TGTTAAGTCA TGCGGAATCT TTAATTCCCA CTTTTCTGAA TGAGGATGAC 1620 1621 TTGCAGCTCT TAAGGGTATT CTTTGACCAA TTACAATCAC TGATAAACCC TGCTGAATTT 1680 1681 GAAGAAAACC GAGTTCAGGA GGATCGAAGT CTAGGGGGGT GCTCATCTCC TTTACTGAGA 1740 1741 ACGGAACCTC CAAATCGTAA TAACCGAAAT GGTAACCTGA AAGAGGAAAT GTCTGAGAAT 1800 1801 TCTGCTTTTC AAGAGGAAGA GCAGTGTTAT GTCAGAAGCA ATCATATGGA TCAAGCTGAT 1860 1861 GATATAACAA GGCAAGACAT GATGGATGAT AAAGACAAAT CTGTAACACC TATTGGTTTG 1920 1921 AAAGAAATTG ACAGAGATGT TCAGAATGTT GAAACAAGTG GTTCAGATAC AAGTTCCACA 1980 1981 AAGGGAAAAA ATGCCGTTGA TAAATTAGTT GAGCGTCTCA GAGATAGTAC ACCTGCAGGA 2040 2041 GTTCGAGAGG ATGAAAAAGT TGAAACTGTT CAAACTGAAG AGAAGCAACG GAGAAAAAGG 2100 2101 AAGCGAACTA TAATGAATGA TGAACAGGTG ACAATAATAG AAAGGGCCCT TTTGGATGAA 2160 2161 CCTGAAATGC AGCGAAATAC TGCTTCTATA CAATCGTGGG CTGATAAATT ATGTCATCAT 2220 2221 GGCTCAGAGG TTACATGTTC GCAGCTACGG AACTGGCTCA ACAATCGAAA GGCCAGGCTT 2280 2281 GCACGAGCAA GTAAGGATGC TCGCCCCCCT CCAGAGCCTG ATAATGCTTT TGCAGGAAAG 2340 2341 CAAGGTGGGC CACAACCAGG TCATCCATTC AAAGCACCTG ATAGTTCTGG TGAAGAGGCT 2400 2401 GCCCCCTCAA ATACCAGAGG CACTCGAAGC ATGTCAAGAA TTAGCACCAG TGAAAACCCA 2460 2461 GAGGCTCCAG AATTTGTTGA TTTTGGTGCT GCAGAATTTG TTCAGTGCAA GCCAGGTCAG 2520 2521 TTTGTAGTGC TTGTAGATGG ACGAGGTGAG GAGATTGGTA AGGGAAAAGT ACACCAGGTT 2580 2581 CAAGGTAAAT GGTGTGGAAA GAGCTTGGAG GAATCAGGGA CGTGTGTTGT GGATGCCGTT 2640 2641 GACCTAAAGG CTGACAAATG GGTGAAGCTA CCCTACCCAT CTGAAGCCAC AGGTACCTCA 2700 2701 TTTGAAGAGG CTGAAACAAA ATTTGGGGTA ATGAGAGTGA TGTGGGATTC AAACAAAATA 2760 2761 TTCTTGTTGC GACCTCAATA A 2781 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Coc-1031 | Corchorus capsularis | 86.76 | 0.0 | 1495 |
| LLPS-Gor-2016 | Gossypium raimondii | 86.52 | 0.0 | 1554 |
| LLPS-Vir-1530 | Vigna radiata | 67.02 | 1e-155 | 474 |
| LLPS-Mae-2059 | Manihot esculenta | 66.94 | 0.0 | 1191 |
| LLPS-Viv-2275 | Vitis vinifera | 63.72 | 0.0 | 1107 |
| LLPS-Pot-2430 | Populus trichocarpa | 63.01 | 0.0 | 960 |
| LLPS-Prp-1922 | Prunus persica | 62.95 | 0.0 | 1082 |
| LLPS-Cus-0153 | Cucumis sativus | 61.0 | 0.0 | 1022 |
| LLPS-Glm-2203 | Glycine max | 59.0 | 0.0 | 1000 |
| LLPS-Phv-1866 | Phaseolus vulgaris | 58.63 | 0.0 | 980 |
| LLPS-Via-1510 | Vigna angularis | 57.59 | 0.0 | 927 |
| LLPS-Sol-2212 | Solanum lycopersicum | 55.15 | 0.0 | 878 |
| LLPS-Nia-1895 | Nicotiana attenuata | 53.63 | 0.0 | 867 |
| LLPS-Met-2259 | Medicago truncatula | 52.6 | 0.0 | 870 |
| LLPS-Amt-0552 | Amborella trichopoda | 51.05 | 2e-171 | 538 |
| LLPS-Ori-2272 | Oryza indica | 50.85 | 2e-111 | 372 |
| LLPS-Orbr-1784 | Oryza brachyantha | 49.36 | 1e-136 | 443 |
| LLPS-Org-1847 | Oryza glaberrima | 48.7 | 9e-135 | 437 |
| LLPS-Dac-0024 | Daucus carota | 48.32 | 0.0 | 721 |
| LLPS-Arl-0038 | Arabidopsis lyrata | 48.26 | 0.0 | 680 |
| LLPS-Brd-2206 | Brachypodium distachyon | 48.24 | 6e-133 | 432 |
| LLPS-Sei-1944 | Setaria italica | 48.07 | 1e-133 | 434 |
| LLPS-Art-0295 | Arabidopsis thaliana | 47.91 | 0.0 | 687 |
| LLPS-Sob-0889 | Sorghum bicolor | 47.8 | 5e-128 | 421 |
| LLPS-Tra-0878 | Triticum aestivum | 46.88 | 1e-135 | 439 |
| LLPS-Orb-0064 | Oryza barthii | 46.8 | 2e-89 | 311 |
| LLPS-Hov-0911 | Hordeum vulgare | 46.59 | 1e-133 | 434 |
| LLPS-Zem-1556 | Zea mays | 46.45 | 4e-123 | 405 |
| LLPS-Orr-1248 | Oryza rufipogon | 46.21 | 2e-121 | 401 |
| LLPS-Orp-2038 | Oryza punctata | 45.57 | 4e-115 | 383 |
| LLPS-Orni-1545 | Oryza nivara | 45.57 | 2e-115 | 384 |
| LLPS-Orgl-0542 | Oryza glumaepatula | 45.39 | 2e-114 | 382 |
| LLPS-Brr-0973 | Brassica rapa | 44.99 | 0.0 | 669 |
| LLPS-Lep-1481 | Leersia perrieri | 44.92 | 7e-120 | 396 |
| LLPS-Brn-1202 | Brassica napus | 44.66 | 0.0 | 663 |
| LLPS-Bro-2525 | Brassica oleracea | 44.34 | 0.0 | 662 |
| LLPS-Hea-0009 | Helianthus annuus | 44.33 | 0.0 | 626 |
| LLPS-Tru-0734 | Triticum urartu | 44.3 | 1e-45 | 182 |
| LLPS-Orm-1848 | Oryza meridionalis | 44.12 | 7e-79 | 281 |
| LLPS-Ors-2299 | Oryza sativa | 43.6 | 4e-26 | 118 |
| LLPS-Mua-1243 | Musa acuminata | 38.66 | 9e-133 | 429 |
| LLPS-Php-1533 | Physcomitrella patens | 38.33 | 4e-98 | 340 |
| LLPS-Sem-1110 | Selaginella moellendorffii | 37.06 | 8e-80 | 286 |