LLPS-Thc-1412
TCM_043044
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Ribosomal protein L10 family protein |
| Gene Name: | TCM_043044 |
| Ensembl Gene: | TCM_043044 |
| Ensembl Protein: | EOY18493 |
| Organism: | Theobroma cacao |
| Taxa ID: | 3641 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EOY18493 | EOY18493 |
| UniProt | A0A061FNL7, A0A061FNL7_THECC | |
| GeneBank | CM001888 | EOY18493.1 |
| RefSeq | XM_018129722.1 | XP_017985211.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 METALLSFPS SKPPPSQTQT LKPTNPFLHS SKPKFPSFKP TTPFPSIKAA ISRTKKEETV 60 61 ETVKSQLENC YLIAAVKYTG FTVKQFQELR RSLPGSSKLL VAKNTLVFKA IEGTPWEALK 120 121 PCMKGMNAWL FVHSEEIPDA IKPYRTFQKE KKVENDFTGA VFEGKFYGPG EFKQLENMPT 180 181 RAEIYAKLLG SLQSPAIGLV GTLQAPARDV VMILQAYVKK LEEESGGQ 228 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGAAACCG CTCTCCTTTC CTTCCCTTCA TCCAAGCCTC CACCTTCCCA AACCCAAACT 60 61 CTGAAACCCA CAAACCCATT TTTACACTCT TCCAAACCCA AGTTCCCTTC CTTCAAACCC 120 121 ACCACCCCTT TCCCTTCCAT CAAAGCAGCC ATTTCCCGTA CCAAAAAGGA AGAAACGGTT 180 181 GAAACGGTTA AAAGCCAATT AGAGAACTGT TACCTTATAG CAGCTGTAAA ATACACTGGT 240 241 TTCACTGTTA AGCAATTCCA GGAATTACGT AGATCACTTC CAGGGTCATC CAAGCTGCTT 300 301 GTAGCTAAAA ATACTTTGGT TTTCAAGGCT ATTGAAGGAA CTCCCTGGGA AGCCTTGAAA 360 361 CCTTGCATGA AAGGCATGAA TGCTTGGCTT TTTGTTCACA GTGAAGAAAT CCCAGATGCT 420 421 ATTAAGCCTT ACAGGACGTT TCAGAAGGAA AAGAAGGTTG AAAATGACTT CACAGGGGCT 480 481 GTTTTTGAAG GGAAGTTTTA TGGGCCTGGA GAGTTTAAGC AGTTGGAAAA TATGCCTACC 540 541 AGGGCTGAGA TTTATGCTAA GCTTCTGGGA AGTTTACAGA GTCCTGCTAT TGGACTTGTT 600 601 GGGACACTCC AGGCTCCTGC CAGGGATGTT GTAATGATTT TGCAGGCTTA TGTGAAGAAG 660 661 CTGGAGGAGG AAAGTGGTGG GCAATAG 687 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Coc-1792 | Corchorus capsularis | 87.72 | 8e-127 | 365 |
| LLPS-Mae-0044 | Manihot esculenta | 85.79 | 2e-113 | 331 |
| LLPS-Gor-2561 | Gossypium raimondii | 84.65 | 7e-123 | 355 |
| LLPS-Viv-1384 | Vitis vinifera | 82.12 | 5e-104 | 307 |
| LLPS-Nia-2151 | Nicotiana attenuata | 78.69 | 1e-101 | 301 |
| LLPS-Sol-2312 | Solanum lycopersicum | 77.47 | 6e-100 | 297 |
| LLPS-Sot-0141 | Solanum tuberosum | 77.47 | 8e-100 | 296 |
| LLPS-Dac-1512 | Daucus carota | 76.92 | 2e-100 | 298 |
| LLPS-Hea-2587 | Helianthus annuus | 76.92 | 1e-98 | 294 |
| LLPS-Brr-1998 | Brassica rapa | 75.27 | 2e-100 | 298 |
| LLPS-Bro-2247 | Brassica oleracea | 75.27 | 2e-100 | 298 |
| LLPS-Brn-2338 | Brassica napus | 75.27 | 2e-100 | 298 |
| LLPS-Art-0857 | Arabidopsis thaliana | 74.73 | 6e-100 | 296 |
| LLPS-Sem-0915 | Selaginella moellendorffii | 74.3 | 9e-92 | 275 |
| LLPS-Arl-2671 | Arabidopsis lyrata | 74.18 | 1e-99 | 296 |
| LLPS-Pot-2759 | Populus trichocarpa | 74.12 | 1e-115 | 337 |
| LLPS-Tru-0909 | Triticum urartu | 73.47 | 2e-17 | 78.2 |
| LLPS-Mua-1723 | Musa acuminata | 73.08 | 6e-96 | 287 |
| LLPS-Sob-1765 | Sorghum bicolor | 72.68 | 2e-95 | 285 |
| LLPS-Zem-0874 | Zea mays | 72.68 | 8e-96 | 286 |
| LLPS-Amt-2212 | Amborella trichopoda | 72.63 | 2e-92 | 278 |
| LLPS-Sei-0119 | Setaria italica | 72.53 | 2e-94 | 283 |
| LLPS-Cus-0292 | Cucumis sativus | 72.14 | 4e-101 | 300 |
| LLPS-Tra-2517 | Triticum aestivum | 71.58 | 7e-93 | 279 |
| LLPS-Prp-2288 | Prunus persica | 71.5 | 2e-105 | 311 |
| LLPS-Php-0969 | Physcomitrella patens | 71.11 | 1e-88 | 268 |
| LLPS-Orbr-0846 | Oryza brachyantha | 70.49 | 3e-93 | 280 |
| LLPS-Lep-1462 | Leersia perrieri | 70.49 | 2e-93 | 280 |
| LLPS-Brd-0122 | Brachypodium distachyon | 70.49 | 3e-92 | 277 |
| LLPS-Ors-0125 | Oryza sativa | 69.95 | 7e-92 | 276 |
| LLPS-Orp-1910 | Oryza punctata | 69.4 | 5e-92 | 276 |
| LLPS-Orr-0476 | Oryza rufipogon | 69.4 | 7e-92 | 276 |
| LLPS-Org-0098 | Oryza glaberrima | 69.4 | 7e-92 | 276 |
| LLPS-Orb-2362 | Oryza barthii | 69.4 | 7e-92 | 276 |
| LLPS-Ori-1740 | Oryza indica | 69.4 | 9e-92 | 276 |
| LLPS-Orni-1728 | Oryza nivara | 69.4 | 7e-92 | 276 |
| LLPS-Orgl-0420 | Oryza glumaepatula | 69.4 | 7e-92 | 276 |
| LLPS-Glm-1702 | Glycine max | 68.87 | 2e-98 | 294 |
| LLPS-Met-2614 | Medicago truncatula | 68.6 | 4e-98 | 293 |
| LLPS-Phv-1514 | Phaseolus vulgaris | 68.45 | 1e-97 | 291 |
| LLPS-Via-1322 | Vigna angularis | 67.96 | 1e-98 | 294 |
| LLPS-Vir-1056 | Vigna radiata | 66.99 | 2e-92 | 295 |
| LLPS-Orm-1129 | Oryza meridionalis | 53.42 | 2e-51 | 172 |
| LLPS-Osl-1391 | Ostreococcus lucimarinus | 37.01 | 1e-24 | 102 |
| LLPS-Chr-1442 | Chlamydomonas reinhardtii | 34.62 | 5e-24 | 100 |
| LLPS-Chc-1162 | Chondrus crispus | 31.85 | 2e-15 | 76.6 |
| LLPS-Gas-0136 | Galdieria sulphuraria | 31.43 | 5e-18 | 83.2 |
| LLPS-Cym-1031 | Cyanidioschyzon merolae | 28.38 | 1e-10 | 63.2 |