LLPS-Chc-1162
CHC_T00003658001
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | CHC_T00003658001 |
| Ensembl Gene: | CHC_T00003658001 |
| Ensembl Protein: | CDF34742 |
| Organism: | Chondrus crispus |
| Taxa ID: | 2769 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CDF34742 | CDF34742 |
| UniProt | R7Q865, R7Q865_CHOCR | |
| GeneBank | HG001706 | CDF34742.1 |
| RefSeq | XM_005714504.1 | XP_005714561.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSTPAFSVAA SVAPRSSFTP NRALCSRPRR QLAARPARRA AVSMVSEVNI DKKREKVALV 60 61 KESLENCQML FATNLSGLSV AQVYDLRQRV PKTTKCMTVK NTLMRRAIED SEWASAHEFT 120 121 VGSSLWFFVQ DDFKGSVEAF EKFAKDLKRD PIIGGVYDGQ KCDGEGIKAI AALPSKQELI 180 181 QKIAVGIRMV PTKVARSVKA VPTKVAVAIK LAVADESKGD ESAAE 225 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCGACTC CAGCCTTTTC CGTGGCCGCG TCCGTCGCGC CGCGCTCCTC GTTCACGCCG 60 61 AATCGCGCGC TGTGTTCGCG CCCGCGCCGC CAGCTCGCGG CGCGCCCTGC GCGTCGGGCG 120 121 GCCGTGTCCA TGGTTTCGGA GGTGAACATC GACAAGAAGA GGGAGAAGGT CGCCTTGGTC 180 181 AAAGAGAGCC TGGAGAACTG CCAGATGCTC TTCGCGACGA ATTTGAGCGG CCTGTCAGTG 240 241 GCGCAGGTGT ACGATCTCCG GCAACGCGTC CCCAAAACCA CCAAGTGCAT GACGGTGAAG 300 301 AACACCCTCA TGAGGCGTGC CATCGAGGAT TCTGAATGGG CCTCCGCCCA TGAATTTACG 360 361 GTCGGCTCCA GCCTGTGGTT CTTTGTGCAG GACGACTTTA AGGGCTCTGT CGAAGCGTTC 420 421 GAGAAGTTTG CAAAGGATCT CAAGAGAGAC CCGATTATTG GCGGGGTCTA CGATGGACAA 480 481 AAGTGCGACG GAGAAGGTAT CAAGGCCATT GCAGCGCTTC CGTCTAAGCA GGAGCTTATT 540 541 CAGAAGATCG CCGTTGGTAT CAGGATGGTT CCCACCAAGG TCGCACGCTC TGTCAAGGCC 600 601 GTGCCTACCA AAGTTGCTGT CGCTATCAAG TTGGCTGTGG CGGATGAAAG CAAAGGGGAT 660 661 GAATCTGCAG CTGAGTAA 678 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Gas-0136 | Galdieria sulphuraria | 36.81 | 3e-26 | 105 |
| LLPS-Osl-1391 | Ostreococcus lucimarinus | 33.95 | 1e-18 | 85.1 |
| LLPS-Brn-2338 | Brassica napus | 32.22 | 4e-23 | 98.2 |
| LLPS-Bro-2247 | Brassica oleracea | 32.22 | 4e-23 | 98.2 |
| LLPS-Mae-0044 | Manihot esculenta | 31.72 | 1e-19 | 88.6 |
| LLPS-Brr-1998 | Brassica rapa | 31.52 | 4e-23 | 98.2 |
| LLPS-Cym-1031 | Cyanidioschyzon merolae | 31.4 | 4e-23 | 98.6 |
| LLPS-Arl-2671 | Arabidopsis lyrata | 31.32 | 5e-22 | 95.1 |
| LLPS-Art-0857 | Arabidopsis thaliana | 31.32 | 1e-22 | 96.7 |
| LLPS-Glm-1702 | Glycine max | 31.3 | 1e-18 | 86.3 |
| LLPS-Php-0969 | Physcomitrella patens | 31.25 | 1e-18 | 85.9 |
| LLPS-Viv-1384 | Vitis vinifera | 31.21 | 6e-19 | 86.7 |
| LLPS-Cus-0292 | Cucumis sativus | 30.77 | 3e-18 | 84.7 |
| LLPS-Thc-1412 | Theobroma cacao | 30.56 | 6e-16 | 77.8 |
| LLPS-Vir-1056 | Vigna radiata | 30.53 | 5e-16 | 81.6 |
| LLPS-Amt-2212 | Amborella trichopoda | 30.5 | 2e-18 | 85.1 |
| LLPS-Coc-1792 | Corchorus capsularis | 30.07 | 9e-18 | 83.2 |
| LLPS-Dac-1512 | Daucus carota | 30.0 | 1e-19 | 88.6 |
| LLPS-Phv-1514 | Phaseolus vulgaris | 29.77 | 6e-17 | 80.9 |
| LLPS-Chr-1442 | Chlamydomonas reinhardtii | 29.41 | 6e-13 | 69.3 |
| LLPS-Sot-0141 | Solanum tuberosum | 28.0 | 6e-20 | 89.4 |
| LLPS-Pot-2759 | Populus trichocarpa | 27.96 | 5e-19 | 86.7 |
| LLPS-Sem-0915 | Selaginella moellendorffii | 27.88 | 8e-16 | 77.0 |
| LLPS-Prp-2288 | Prunus persica | 27.57 | 3e-19 | 87.8 |
| LLPS-Nia-2151 | Nicotiana attenuata | 27.57 | 5e-20 | 89.7 |
| LLPS-Mua-1723 | Musa acuminata | 27.53 | 8e-17 | 80.5 |
| LLPS-Ori-1740 | Oryza indica | 27.45 | 5e-16 | 78.2 |
| LLPS-Ors-0125 | Oryza sativa | 27.45 | 5e-16 | 77.8 |
| LLPS-Sol-2312 | Solanum lycopersicum | 27.43 | 1e-19 | 88.6 |
| LLPS-Hea-2587 | Helianthus annuus | 27.43 | 3e-18 | 84.3 |
| LLPS-Gor-2561 | Gossypium raimondii | 27.32 | 1e-17 | 82.8 |
| LLPS-Orgl-0420 | Oryza glumaepatula | 26.75 | 5e-16 | 78.2 |
| LLPS-Orb-2362 | Oryza barthii | 26.75 | 5e-16 | 78.2 |
| LLPS-Orni-1728 | Oryza nivara | 26.75 | 5e-16 | 78.2 |
| LLPS-Orr-0476 | Oryza rufipogon | 26.75 | 5e-16 | 78.2 |
| LLPS-Org-0098 | Oryza glaberrima | 26.75 | 5e-16 | 78.2 |
| LLPS-Orp-1910 | Oryza punctata | 26.75 | 2e-16 | 79.3 |
| LLPS-Sei-0119 | Setaria italica | 26.51 | 9e-16 | 77.4 |
| LLPS-Orbr-0846 | Oryza brachyantha | 25.99 | 1e-15 | 76.6 |
| LLPS-Brd-0122 | Brachypodium distachyon | 25.9 | 1e-15 | 76.6 |
| LLPS-Tra-2517 | Triticum aestivum | 25.9 | 5e-15 | 75.1 |
| LLPS-Zem-0874 | Zea mays | 25.9 | 3e-15 | 75.9 |
| LLPS-Sob-1765 | Sorghum bicolor | 25.9 | 8e-15 | 74.3 |
| LLPS-Lep-1462 | Leersia perrieri | 25.41 | 2e-16 | 79.0 |
| LLPS-Met-2614 | Medicago truncatula | 25.27 | 8e-21 | 92.0 |
| LLPS-Via-1322 | Vigna angularis | 25.15 | 9e-18 | 83.2 |
| LLPS-Orm-1129 | Oryza meridionalis | 21.38 | 1e-09 | 59.7 |