LLPS-Thc-1102
TCM_001667
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | XS domain-containing protein / XS zinc finger domain-containing protein-related isoform 1 |
| Gene Name: | TCM_001667 |
| Ensembl Gene: | TCM_001667 |
| Ensembl Protein: | EOX92792 |
| Organism: | Theobroma cacao |
| Taxa ID: | 3641 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, siRNA body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EOX92792 | EOX92792 |
| Ensembl | EOX92791 | EOX92791 |
| UniProt | A0A061DL43, A0A061DL43_THECC | |
| GeneBank | CM001879 | EOX92791.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSSRKGSGNS FVAGGMNNPS SKGKDVTGVS SPKVEQLSQG VTDMSLDSAQ DDGEWEVIQR 60 61 KSKNRAGSSA ARPRGPQNSN PKPFGGMRGN AGSGRASGNA WATHNADSRM ATGRGNTRPQ 120 121 TFNKGFENNH VPPHPVIRAP LEHGWNWQSR AGSNPAKGLQ DGHGKDSVST EVEKDNDIED 180 181 VEDDSDDNAV DESDDELLTD DFDSDTSEKS HETRKKNRWF KKLFESLDSL TIEEINDSAR 240 241 QWHCPACQGG PGAIDWYRGL QPLMTHAKTK GAKRVKLHRE LAELLDEELC RRGTTVIPAG 300 301 EAFGKWKGLK DEEKDYEIVW PPMVMIMNTQ LEQDENDKWI GMGNQELLDY FSSYAAVKAR 360 361 HSYGPHGHRG MSVLIFESTA RGYLEAERLH KHFAEQGTDR EAWERRRVLF HPGGKRQLYG 420 421 YMAIKEDLDS FNQHCQGKFR LKFDMRSYQE MVVQQIRQMS EDNQQLIFYK NKVAKERRLK 480 481 SALQESLGIV REKLLKTVEE NRIVRQRTKM QHEQNKEEMD FQEQFFKEQI KFIHEARDEK 540 541 EEDFEKLQQQ EREKVTQSNP NASNTEEYRR RASEIAKFIK FQNEEMEAFV AERDKLIKVH 600 601 EEKMTAMRQR HWNEEVELEK EFDSELSHLM EKYTPDSTKV STKNA 645 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGATGGAGA GTGGGAGGTT ATTCAGAGGA AGTCTAAGAA TAGAGCTGGA AGCAGTGCTG 60 61 CAAGACCCCG GGGTCCTCAA AATTCTAATC CTAAACCATT TGGAGGCATG CGGGGTAATG 120 121 CTGGATCAGG AAGAGCCTCT GGCAATGCCT GGGCGACACA TAATGCTGAT TCTAGGATGG 180 181 CAACTGGCAG AGGGAATACA AGACCCCAAA CATTCAACAA GGGTTTTGAG AACAATCATG 240 241 TGCCTCCGCA TCCTGTCATT CGCGCACCTC TTGAGCATGG ATGGAATTGG CAATCTAGAG 300 301 CTGGTTCTAA TCCAGCCAAG GGTTTACAAG ATGGCCATGG GAAAGACAGT GTTAGCACTG 360 361 AGGTCGAAAA AGACAATGAT ATTGAAGATG TTGAGGATGA CTCAGATGAT AATGCTGTTG 420 421 ATGAGTCTGA TGATGAACTT CTTACAGATG ACTTTGATTC AGATACTAGT GAAAAGAGCT 480 481 ATGGTGATGA TAATGAACAC ACAGCTTGAA CAAGATGAGA ATGATAAGTG GATTGGTATG 540 541 GGAAACCAAG AGCTTCTTGA CTATTTCAGC TCATATGCTG CTGTGAAGGC ACGACACTCT 600 601 TATGGCCCAC ATGGGCATCG TGGGATGAGT GTTCTGATTT TTGAGAGCAC AGCAAGGGGT 660 661 TATTTGGAAG CCGAGCGTCT GCATAAGCAT TTTGCTGAGC AAGGAACAGA TAGGGAGGCT 720 721 TGGGAACGCC GTCGGGTCTT ATTTCATCCA GGTGGGAAGC GCCAACTTTA CGGTTACATG 780 781 GCTATAAAGG AAGACCTGGA CAGCTTCAAC CAGCATTGTC AAGGCAAATT TAGGCTTAAA 840 841 TTTGATATGA GATCCTATCA AGAGATGGTT GTTCAGCAAA TCAGGCAAAT GAGTGAGGAC 900 901 AACCAGCAGC TTATTTTTTA CAAGAACAAG GTCGCCAAAG AGCGAAGACT AAAAAGTGCT 960 961 CTTCAAGAAT CTTTGGGCAT TGTGAGGGAG AAGCTCCTGA AGACGGTGGA GGAGAACAGG 1020 1021 ATTGTAAGAC AGAGAACCAA AATGCAGCAC GAACAGAACA AAGAAGAGAT GGATTTCCAA 1080 1081 GAGCAATTCT TCAAGGAACA AATCAAATTT ATCCATGAAG CTAGGGATGA GAAGGAAGAG 1140 1141 GATTTTGAGA AGCTGCAGCA GCAAGAGCGT GAGAAGGTCA CGCAATCTAA CCCTAATGCT 1200 1201 TCAAATACAG AGGAATACAG GCGCAGGGCG AGTGAAATTG CGAAATTCAT AAAGTTCCAG 1260 1261 AATGAAGAGA TGGAGGCATT TGTGGCAGAG AGGGACAAGC TGATTAAAGT ACATGAAGAG 1320 1321 AAGATGACAG CAATGAGACA GAGGCACTGG AACGAAGAAG TAGAGCTGGA GAAAGAGTTT 1380 1381 GACAGTGAGT TGAGCCACCT AATGGAGAAG TACACTCCCG ATAGCACAAA AGTGAGCACC 1440 1441 AAGAATGCTT GA 1452 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Gor-1188 | Gossypium raimondii | 85.58 | 0.0 | 999 |
| LLPS-Coc-2074 | Corchorus capsularis | 80.69 | 0.0 | 948 |
| LLPS-Met-1287 | Medicago truncatula | 72.16 | 0.0 | 613 |
| LLPS-Prp-2524 | Prunus persica | 68.69 | 0.0 | 778 |
| LLPS-Viv-0702 | Vitis vinifera | 68.46 | 0.0 | 775 |
| LLPS-Mae-2106 | Manihot esculenta | 68.11 | 0.0 | 780 |
| LLPS-Pot-1373 | Populus trichocarpa | 66.46 | 0.0 | 781 |
| LLPS-Phv-1096 | Phaseolus vulgaris | 63.89 | 0.0 | 759 |
| LLPS-Glm-1161 | Glycine max | 63.21 | 0.0 | 752 |
| LLPS-Cus-2133 | Cucumis sativus | 62.21 | 0.0 | 711 |
| LLPS-Via-1261 | Vigna angularis | 60.22 | 0.0 | 701 |
| LLPS-Vir-1934 | Vigna radiata | 59.47 | 0.0 | 670 |
| LLPS-Nia-2330 | Nicotiana attenuata | 56.53 | 0.0 | 600 |
| LLPS-Arl-2573 | Arabidopsis lyrata | 55.49 | 0.0 | 612 |
| LLPS-Sol-0998 | Solanum lycopersicum | 55.45 | 0.0 | 577 |
| LLPS-Sob-1684 | Sorghum bicolor | 55.1 | 3e-177 | 524 |
| LLPS-Lep-2173 | Leersia perrieri | 54.39 | 4e-177 | 524 |
| LLPS-Mua-1156 | Musa acuminata | 54.32 | 0.0 | 633 |
| LLPS-Brd-1424 | Brachypodium distachyon | 54.22 | 8e-177 | 524 |
| LLPS-Sot-1658 | Solanum tuberosum | 54.17 | 8e-151 | 450 |
| LLPS-Orp-1317 | Oryza punctata | 54.12 | 8e-172 | 511 |
| LLPS-Orgl-2342 | Oryza glumaepatula | 54.05 | 8e-167 | 499 |
| LLPS-Orb-1546 | Oryza barthii | 54.05 | 2e-159 | 499 |
| LLPS-Orr-1817 | Oryza rufipogon | 54.05 | 8e-162 | 507 |
| LLPS-Orni-2375 | Oryza nivara | 53.86 | 3e-159 | 499 |
| LLPS-Bro-2553 | Brassica oleracea | 53.85 | 0.0 | 571 |
| LLPS-Org-0991 | Oryza glaberrima | 53.8 | 6e-167 | 498 |
| LLPS-Ors-1794 | Oryza sativa | 53.8 | 2e-169 | 505 |
| LLPS-Ori-2241 | Oryza indica | 53.62 | 2e-166 | 497 |
| LLPS-Brn-2314 | Brassica napus | 53.54 | 0.0 | 606 |
| LLPS-Brr-2481 | Brassica rapa | 53.54 | 0.0 | 606 |
| LLPS-Orm-0990 | Oryza meridionalis | 53.32 | 4e-161 | 503 |
| LLPS-Art-1588 | Arabidopsis thaliana | 53.12 | 0.0 | 609 |
| LLPS-Hea-2579 | Helianthus annuus | 52.59 | 0.0 | 564 |
| LLPS-Sei-0478 | Setaria italica | 52.35 | 4e-180 | 531 |
| LLPS-Zem-1963 | Zea mays | 51.94 | 7e-176 | 521 |
| LLPS-Orbr-1338 | Oryza brachyantha | 51.61 | 2e-168 | 502 |
| LLPS-Tra-1976 | Triticum aestivum | 51.26 | 0.0 | 552 |
| LLPS-Tru-1535 | Triticum urartu | 51.26 | 0.0 | 552 |
| LLPS-Dac-0840 | Daucus carota | 51.24 | 0.0 | 545 |
| LLPS-Hov-1885 | Hordeum vulgare | 51.01 | 0.0 | 551 |
| LLPS-Amt-0296 | Amborella trichopoda | 46.72 | 1e-157 | 476 |
| LLPS-Php-0640 | Physcomitrella patens | 39.76 | 2e-92 | 308 |
| LLPS-Sem-0244 | Selaginella moellendorffii | 25.36 | 3e-07 | 57.4 |