LLPS-Tar-2456
pdgfra
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Platelet-derived growth factor receptor alpha |
| Gene Name: | pdgfra |
| Ensembl Gene: | ENSTRUG00000015076.2 |
| Ensembl Protein: | ENSTRUP00000038528.2 |
| Organism: | Takifugu rubripes |
| Taxa ID: | 31033 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSTRUT00000038667.2 | ENSTRUP00000038528.2 |
| UniProt | H2UNK7, H2UNK7_TAKRU | |
| RefSeq | XM_003973932.2 | XP_003973981.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDGTKTYVVF GVILVVSVTS GLSPPTIVSN EEEFILLPSS ILNVSCTGKR NVVWAEPLPT 60 61 NSFVFPGYYT ATLFIYNATV KNTGYYTCTY VHLEAEQEGQ PQEANEAEIY VFVPDAQVPF 120 121 VPETPDNLVV TMDPSGVPIS CRVSDPHSHV TLRSVSTGDE MSAFYDGRIG FFGMLSPGQY 180 181 QCETFVNGRI FRSDIYTVED EASTETEDFE VDVRASEETV RAGQPFNVTC TCPPGPGFQQ 240 241 QWLHPKSQAA EAVQVKETFP DRVVYVLSVP RAVSQDSGTY ECSITHVMSG AVRAGGAAVA 300 301 IFEENSIVAL DHSGILTSEF VSLLEETEFT ILINAYPPPK VHWLKDAESL SENDFILTKT 360 361 SHLEGNRYQS ILILRQPLLK DSGNYTIMAT SGSQTAQFSF TLKMKAPRPS MFPPSSAPLL 420 421 LPQLEELVVP LHTAFTLTCQ GEATIAWDVP LDVPEKTQED NSGLFVTTIS VDSASAMHTG 480 481 YYRCFYRRNA TEDADEAMQS IYVYVPDPDV PFVPLVVPFG NHVLSDHEEM EIQCRVSDPS 540 541 ANVTLINVDT QQPVPCMYDS KRGALGVFTA GTYVCKAVVN GAEHYSEDYI VHGWIGGSGL 600 601 HVELTAKHTV LLVGDTITVN CLAQGSEILE DHWKYPGKVA NRAIKTVHEN KKDQEILYTL 660 661 TVPQASVKDT GIYSCSITDV VTNMSQTKQI AIRVYASEFM SIQPKFGEYE SAELDEVCEF 720 721 RAEITSFPTA SVTWFKDSVP LSNVTAEIST SLQKLSETSY MSVLTLIRAK EEDSGNYTMR 780 781 VKNGDQSRTV SLILEVKVPA VIVDLMDIHH GSATGQSVVC ITRGQPTPLV EWFVCKNIKH 840 841 CANDTSSWVP LPVNSTEVTM DSRFDEDNNL ETQVIFGHLE NTLAVRCLAR NEMAAVSREI 900 901 KLVSNGPHPE LTVAAAVLVL LVIVIISLIV LVVIWKQKPR YEIRWRVIES VSPDGHEYIY 960 961 VDPMQLPYDS RWEFPRDRLV LGRILGSGAF GKVVEGTAYG LSRSQPVMKV AVKMLKPTAR 1020 1021 SSEKQALMSE LKIMTHLGPH LNIVNLLGAC TKSGPIYIIT EYCFYGDLVN YLHKNRESFL 1080 1081 NPKPEKSNKK ELDIFGINPA DESSRSYVIL SFESKGDYMD MKQADNTQYV PMLEISNASK 1140 1141 YSDLQGSNYD HPPSQKGSND GEMDQLLSDN MSEGLTTNDL LSFTYQVAKG MEFLASKNCV 1200 1201 HRDLAARNVL LSQGKIVKIC DFGLARDIMH DNNYVSKGST FLPVKWMAPE SIFDNLYTTL 1260 1261 SDVWSYGILL WEIFSLGGTP YPGMIVDSSF YNKIKSGYRM SKPEHAPQDV YDMMMKCWNS 1320 1321 EPEKRPSFLG LSDTIASLLP SSYKRHYERV NHEFLKSDHP AVTRVCVDND DAYIGITYKN 1380 1381 QGKLKDRESG FDEQRLSSDS GYIIPLPDLD PISDEEYGKR NRHSSQTSEE SAIETGSSSS 1440 1441 TFAKREGETL EDITLLDEMC LDCSDLVEDS FL 1472 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGATGGGA CAAAGACGTA TGTCGTCTTT GGGGTCATTC TGGTGGTTTC AGTCACCTCT 60 61 GGACTGTCAC CTCCAACCAT TGTCTCCAAT GAGGAGGAGT TCATCCTGCT GCCCAGTTCC 120 121 ATTTTGAACG TCAGCTGCAC CGGTAAAAGG AACGTGGTCT GGGCTGAGCC TCTGCCGACA 180 181 AACTCCTTCG TTTTCCCCGG ATACTACACG GCGACGCTGT TCATTTACAA CGCCACGGTG 240 241 AAAAACACCG GCTATTACAC CTGCACATAT GTACATCTGG AGGCTGAACA GGAAGGACAA 300 301 CCACAGGAGG CCAACGAGGC AGAAATCTAT GTGTTTGTCC CAGACGCACA GGTTCCTTTC 360 361 GTCCCTGAGA CGCCCGATAA CTTGGTGGTC ACCATGGACC CCAGCGGAGT GCCCATCTCC 420 421 TGCCGTGTTT CCGACCCCCA CTCCCACGTC ACCCTGAGGA GCGTGTCCAC GGGAGACGAG 480 481 ATGTCTGCCT TCTACGACGG CAGGATTGGC TTTTTCGGAA TGCTGTCGCC GGGCCAGTAC 540 541 CAGTGTGAGA CGTTCGTGAA CGGCCGGATT TTCAGGAGCG ACATTTACAC GGTGGAGGAT 600 601 GAGGCCTCTA CAGAGACAGA AGACTTTGAG GTGGACGTGA GGGCCAGCGA GGAGACGGTG 660 661 AGAGCAGGCC AGCCCTTCAA CGTCACCTGC ACCTGCCCGC CAGGACCCGG CTTCCAGCAG 720 721 CAGTGGCTTC ACCCTAAATC ACAGGCTGCG GAGGCGGTTC AGGTGAAAGA GACTTTTCCG 780 781 GATCGGGTCG TCTACGTCCT CAGCGTCCCG CGAGCCGTCT CTCAGGACAG CGGCACCTAT 840 841 GAGTGCTCCA TCACCCACGT CATGAGCGGA GCGGTCAGAG CCGGTGGGGC GGCCGTCGCC 900 901 ATCTTTGAGG AGAACTCTAT TGTGGCGCTG GACCACAGCG GGATTCTGAC CTCAGAGTTC 960 961 GTCAGCCTTC TGGAGGAGAC AGAGTTCACC ATCCTCATCA ACGCCTACCC ACCCCCCAAA 1020 1021 GTGCACTGGC TAAAAGATGC CGAGTCGCTG TCGGAAAATG ACTTCATTCT CACCAAAACC 1080 1081 AGCCACCTTG AAGGAAATCG GTATCAAAGC ATCCTGATCC TACGGCAGCC GCTGCTGAAG 1140 1141 GACAGCGGGA ACTACACCAT CATGGCCACG AGTGGCTCTC AGACGGCTCA GTTCTCCTTC 1200 1201 ACCCTCAAAA TGAAAGCTCC CAGACCGTCG ATGTTCCCGC CCTCCTCGGC TCCGTTGCTG 1260 1261 CTGCCACAGT TGGAGGAGCT GGTGGTTCCC CTCCACACCG CCTTCACTTT AACATGTCAG 1320 1321 GGGGAGGCGA CAATAGCCTG GGACGTGCCG CTGGACGTGC CGGAGAAGAC GCAGGAGGAC 1380 1381 AACAGCGGCC TCTTCGTCAC CACTATCAGC GTGGACTCCG CCAGCGCCAT GCACACCGGC 1440 1441 TACTACAGGT GCTTCTACAG AAGAAACGCC ACGGAGGACG CGGACGAAGC GATGCAGAGT 1500 1501 ATCTACGTCT ACGTGCCAGA CCCTGACGTC CCCTTTGTTC CGTTGGTGGT GCCTTTCGGC 1560 1561 AACCACGTCC TGTCCGACCA CGAGGAGATG GAGATCCAGT GCCGGGTGTC GGATCCCAGC 1620 1621 GCCAACGTCA CGCTGATAAA TGTCGACACC CAGCAGCCCG TGCCTTGCAT GTACGATAGC 1680 1681 AAGAGGGGCG CTCTGGGCGT GTTCACGGCT GGGACGTATG TCTGCAAGGC CGTGGTCAAC 1740 1741 GGAGCGGAGC ACTACAGCGA GGATTACATC GTCCATGGCT GGATAGGGGG CTCCGGGCTG 1800 1801 CACGTTGAGC TGACGGCCAA ACATACGGTT CTGCTGGTGG GAGACACCAT CACGGTCAAT 1860 1861 TGTTTGGCTC AGGGATCTGA GATTTTGGAG GACCACTGGA AATATCCCGG GAAAGTGGCT 1920 1921 AATCGTGCTA TTAAGACGGT TCACGAGAAC AAAAAGGATC AGGAGATTCT TTACACCCTC 1980 1981 ACAGTCCCGC AGGCTTCCGT CAAGGACACT GGCATTTACT CCTGTTCCAT CACCGATGTA 2040 2041 GTAACCAACA TGAGTCAGAC CAAGCAGATC GCCATTCGCG TTTACGCGAG CGAGTTCATG 2100 2101 TCCATCCAGC CAAAGTTCGG AGAGTACGAA TCGGCCGAGC TGGACGAGGT CTGCGAGTTC 2160 2161 AGGGCCGAGA TCACCTCTTT CCCGACCGCT AGCGTCACGT GGTTTAAAGA CAGCGTCCCG 2220 2221 CTCAGCAACG TGACGGCGGA GATTTCTACC AGCCTCCAGA AGCTCAGCGA GACCAGCTAC 2280 2281 ATGAGTGTCC TGACCCTGAT CCGAGCCAAG GAGGAGGACA GCGGGAACTA CACCATGCGG 2340 2341 GTGAAGAACG GAGATCAGAG TCGCACCGTC AGCCTGATCC TGGAGGTTAA AGTGCCGGCA 2400 2401 GTCATCGTGG ACCTGATGGA CATCCACCAC GGCTCAGCTA CAGGCCAGTC CGTGGTGTGC 2460 2461 ATCACCAGAG GTCAGCCCAC TCCTCTGGTG GAGTGGTTCG TCTGCAAGAA CATCAAGCAC 2520 2521 TGCGCCAATG ACACCTCATC CTGGGTGCCC CTCCCCGTCA ACTCCACGGA GGTCACCATG 2580 2581 GATTCGCGCT TCGACGAGGA CAATAATCTG GAGACCCAGG TCATATTTGG GCACCTGGAG 2640 2641 AACACGCTGG CGGTGCGCTG CCTGGCCAGG AACGAAATGG CCGCCGTCAG CAGGGAGATC 2700 2701 AAGCTGGTGT CCAATGGCCC TCATCCAGAG CTGACTGTCG CGGCGGCTGT GTTGGTGCTC 2760 2761 CTGGTCATTG TCATCATCTC ACTCATTGTC TTGGTTGTGA TCTGGAAACA GAAACCGCGA 2820 2821 TATGAAATCC GCTGGAGGGT CATCGAGTCT GTAAGCCCGG ATGGACACGA GTACATCTAC 2880 2881 GTGGATCCAA TGCAGCTTCC CTACGACTCC AGATGGGAGT TCCCCCGGGA CAGACTTGTG 2940 2941 TTGGGTCGCA TCCTGGGCTC TGGAGCCTTT GGGAAAGTGG TGGAGGGCAC CGCCTATGGG 3000 3001 CTCAGCCGCT CTCAGCCTGT CATGAAGGTG GCAGTAAAGA TGCTCAAACC CACAGCGCGC 3060 3061 TCCAGCGAAA AACAGGCCCT GATGTCTGAG CTGAAGATCA TGACCCACCT GGGACCGCAC 3120 3121 CTCAACATTG TTAACCTGCT GGGCGCCTGC ACCAAGTCAG GCCCCATATA CATCATCACT 3180 3181 GAGTACTGTT TCTACGGCGA TCTGGTCAAC TACCTGCACA AGAACCGGGA GAGCTTCCTC 3240 3241 AACCCGAAGC CAGAGAAGAG CAACAAGAAA GAGTTGGACA TTTTTGGAAT CAACCCCGCG 3300 3301 GACGAGAGCA GCAGAAGTTA TGTGATCCTG TCCTTCGAGA GCAAAGGCGA CTACATGGAC 3360 3361 ATGAAGCAGG CCGACAACAC TCAGTATGTG CCCATGCTGG AGATAAGCAA TGCCTCCAAG 3420 3421 TACTCTGACC TCCAGGGCTC CAACTACGAC CACCCGCCCT CGCAGAAAGG ATCAAATGAC 3480 3481 GGCGAGATGG ATCAACTGCT GTCGGACAAC ATGAGCGAGG GCCTCACCAC CAATGACCTG 3540 3541 CTGAGTTTCA CTTACCAGGT GGCTAAAGGA ATGGAGTTCC TGGCTTCAAA AAATTGTGTC 3600 3601 CACCGAGATC TGGCCGCCAG GAACGTCCTG CTCTCTCAGG GCAAGATAGT GAAGATCTGC 3660 3661 GACTTTGGAC TGGCGCGAGA CATCATGCAT GACAACAACT ACGTCTCCAA AGGAAGCACG 3720 3721 TTCCTACCAG TGAAGTGGAT GGCTCCCGAG AGCATTTTCG ACAACCTGTA CACCACGCTG 3780 3781 AGCGACGTCT GGTCGTACGG CATCCTGCTG TGGGAGATAT TCTCTTTAGG CGGCACGCCA 3840 3841 TACCCAGGTA TGATTGTGGA TTCCAGCTTC TATAACAAGA TCAAGAGTGG CTACAGGATG 3900 3901 TCCAAACCAG AGCACGCGCC TCAGGATGTG TATGACATGA TGATGAAGTG CTGGAACAGC 3960 3961 GAGCCGGAGA AGAGGCCCTC TTTCCTGGGT CTCAGTGACA CCATCGCCTC TTTGCTGCCC 4020 4021 TCCAGCTACA AGCGGCATTA CGAGAGGGTG AACCACGAGT TCCTGAAGAG TGACCACCCT 4080 4081 GCCGTGACCC GAGTGTGCGT AGATAACGAT GACGCCTACA TCGGGATCAC CTACAAAAAC 4140 4141 CAGGGAAAGT TAAAGGACAG GGAAAGTGGA TTTGATGAGC AGCGGCTCAG CTCCGACAGT 4200 4201 GGCTACATCA TCCCCCTGCC TGACCTGGAC CCCATTTCTG ATGAGGAATA CGGGAAGAGG 4260 4261 AACAGACACA GCTCTCAAAC GTCCGAGGAG AGCGCCATCG AGACGGGGTC CAGCAGCTCC 4320 4321 ACTTTCGCAA AGCGCGAGGG CGAGACGCTG GAGGACATCA CGCTTTTGGA CGAGATGTGT 4380 4381 CTGGACTGTA GTGACCTGGT GGAGGACAGC TTTCTGTGA 4419 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Orn-2150 | Oreochromis niloticus | 85.69 | 0.0 | 1791 |
| LLPS-Ten-1048 | Tetraodon nigroviridis | 83.76 | 0.0 | 1742 |
| LLPS-Scm-3327 | Scophthalmus maximus | 82.04 | 0.0 | 2383 |
| LLPS-Pof-0050 | Poecilia formosa | 80.69 | 0.0 | 1689 |
| LLPS-Gaa-2368 | Gasterosteus aculeatus | 75.48 | 0.0 | 1512 |
| LLPS-Orl-3818 | Oryzias latipes | 73.76 | 0.0 | 2133 |
| LLPS-Asm-1191 | Astyanax mexicanus | 73.0 | 0.0 | 1472 |
| LLPS-Xim-0475 | Xiphophorus maculatus | 72.39 | 0.0 | 2091 |
| LLPS-Leo-3842 | Lepisosteus oculatus | 68.74 | 0.0 | 1425 |
| LLPS-Scf-2109 | Scleropages formosus | 64.73 | 0.0 | 1795 |
| LLPS-Dar-2343 | Danio rerio | 64.73 | 0.0 | 1852 |
| LLPS-Cea-4495 | Cercocebus atys | 64.5 | 0.0 | 1202 |
| LLPS-Icp-2265 | Ictalurus punctatus | 64.41 | 0.0 | 1861 |
| LLPS-Meg-1943 | Meleagris gallopavo | 64.25 | 0.0 | 1294 |
| LLPS-Anp-1563 | Anas platyrhynchos | 64.25 | 0.0 | 1298 |
| LLPS-Gaga-3669 | Gallus gallus | 64.06 | 0.0 | 1292 |
| LLPS-Fia-1468 | Ficedula albicollis | 63.87 | 0.0 | 1291 |
| LLPS-Pes-3318 | Pelodiscus sinensis | 63.52 | 0.0 | 1266 |
| LLPS-Anc-3659 | Anolis carolinensis | 63.4 | 0.0 | 1274 |
| LLPS-Cas-2905 | Carlito syrichta | 63.06 | 0.0 | 1255 |
| LLPS-Caj-0997 | Callithrix jacchus | 63.02 | 0.0 | 1264 |
| LLPS-Lac-3940 | Latimeria chalumnae | 63.01 | 0.0 | 1266 |
| LLPS-Gog-1694 | Gorilla gorilla | 62.83 | 0.0 | 1259 |
| LLPS-Mum-3455 | Mus musculus | 62.83 | 0.0 | 1271 |
| LLPS-Hos-1235 | Homo sapiens | 62.83 | 0.0 | 1259 |
| LLPS-Aon-4759 | Aotus nancymaae | 62.74 | 0.0 | 1260 |
| LLPS-Pat-2368 | Pan troglodytes | 62.74 | 0.0 | 1257 |
| LLPS-Pap-0234 | Pan paniscus | 62.74 | 0.0 | 1256 |
| LLPS-Xet-2720 | Xenopus tropicalis | 62.74 | 0.0 | 1254 |
| LLPS-Poa-2219 | Pongo abelii | 62.74 | 0.0 | 1254 |
| LLPS-Fud-3105 | Fukomys damarensis | 62.68 | 0.0 | 1233 |
| LLPS-Maf-1778 | Macaca fascicularis | 62.64 | 0.0 | 1255 |
| LLPS-Paa-2477 | Papio anubis | 62.64 | 0.0 | 1255 |
| LLPS-Rhb-3734 | Rhinopithecus bieti | 62.64 | 0.0 | 1253 |
| LLPS-Ict-0950 | Ictidomys tridecemlineatus | 62.64 | 0.0 | 1253 |
| LLPS-Mam-1202 | Macaca mulatta | 62.64 | 0.0 | 1255 |
| LLPS-Chs-1425 | Chlorocebus sabaeus | 62.55 | 0.0 | 1253 |
| LLPS-Mal-1528 | Mandrillus leucophaeus | 62.55 | 0.0 | 1250 |
| LLPS-Man-4546 | Macaca nemestrina | 62.55 | 0.0 | 1252 |
| LLPS-Eqc-1732 | Equus caballus | 62.55 | 0.0 | 1251 |
| LLPS-Mea-3573 | Mesocricetus auratus | 62.45 | 0.0 | 1260 |
| LLPS-Aim-1280 | Ailuropoda melanoleuca | 62.45 | 0.0 | 1248 |
| LLPS-Cap-0047 | Cavia porcellus | 62.45 | 0.0 | 1239 |
| LLPS-Ran-2665 | Rattus norvegicus | 62.32 | 0.0 | 1257 |
| LLPS-Sus-4457 | Sus scrofa | 62.26 | 0.0 | 1245 |
| LLPS-Dio-3522 | Dipodomys ordii | 62.26 | 0.0 | 1244 |
| LLPS-Caf-3163 | Canis familiaris | 62.26 | 0.0 | 1241 |
| LLPS-Fec-4498 | Felis catus | 62.17 | 0.0 | 1243 |
| LLPS-Myl-3475 | Myotis lucifugus | 62.13 | 0.0 | 1244 |
| LLPS-Mod-4244 | Monodelphis domestica | 61.9 | 0.0 | 1261 |
| LLPS-Bot-4437 | Bos taurus | 61.71 | 0.0 | 1181 |
| LLPS-Loa-2487 | Loxodonta africana | 61.57 | 0.0 | 1241 |
| LLPS-Ova-3029 | Ovis aries | 61.54 | 0.0 | 1234 |
| LLPS-Sah-2335 | Sarcophilus harrisii | 61.52 | 0.0 | 1251 |
| LLPS-Otg-3477 | Otolemur garnettii | 61.34 | 0.0 | 1241 |
| LLPS-Orc-1003 | Oryctolagus cuniculus | 60.57 | 0.0 | 1176 |
| LLPS-Nol-3995 | Nomascus leucogenys | 60.55 | 0.0 | 1179 |
| LLPS-Mup-0537 | Mustela putorius furo | 60.44 | 0.0 | 1182 |
| LLPS-Tag-1014 | Taeniopygia guttata | 60.04 | 0.0 | 1170 |
| LLPS-Ora-2029 | Ornithorhynchus anatinus | 58.97 | 0.0 | 879 |