LLPS-Gaa-2368
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Platelet-derived growth factor receptor, alpha polypeptide |
| Ensembl Gene: | ENSGACG00000014259.1 |
| Ensembl Protein: | ENSGACP00000018838.1 |
| Organism: | Gasterosteus aculeatus |
| Taxa ID: | 69293 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSGACT00000018876.1 | ENSGACP00000018838.1 |
| Ensembl | ENSGACT00000018875.1 | ENSGACP00000018837.1 |
| UniProt | G3PMK6, G3PMK6_GASAC |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDAVRTRVVF GGFLVVLVSV TSGLSPPIIV SNEEEFVLRP NAAFNISCTG KKSVIWVPPL 60 61 PENSFVESGY NTATLFIYNA SVENTDYYMC TYGSLEGEPE EENEAGIYVF VADPQFPFVP 120 121 EAPDNLLVPM NTMGVPISCR VSDPYSHVTL TSVPSREEIH TFYDNKMGFF GSLSPGRYRC 180 181 ETTVNGAAIT SDVYTVYTDA GGAPLHVELS AERTALLVGD AVTVTCVARG SEILEDHWKY 240 241 PGKLANRGIK AVEDIQKLQE IRYTLTIPQA SVKDSGIYSC SITDIVSGES QTKEVAVRVF 300 301 ASEFLSVWPQ FGEDESAELD EVREFRAEIS AFPAARVTWL KDGVALSDVT AEIGLRQLSE 360 361 TSYMSVLTLI RAKEEDSGNY TMRVENGDQR RDVGLMLQVK VPAVIVDLMD IHHGAATGQS 420 421 VVCITRGEPL PLVEWFVCKN IKHCANDSLA WEPLPANSTG VTAESHVNED GNLESQVMFG 480 481 HLESTLAVRC LSRNGMAAVS REVKLVSSGG PHPELTVAAA VLVLLVIVII SLIVLVVIWK 540 541 QKPRYEIRWR VIESVSPDGH EYIYVDPMQL PYDSRWEFPR DRLVLGRILG SGAFGKVVEG 600 601 TAYGLGRSQP VMKVAVKMLK PTARSSEKQA LMSELKIMTH LGPHLNIVNL LGACTKSGPI 660 661 YIITEYCFYG DLVNYLHKNR ENFLSLNPEK TKKEVDIFGI NPADESSRSY VILSLESKAD 720 721 YMDMKQGDGT QYVPLLEMRD ASKYSDIQRS EYDPPPSQKG TLTPEDELLS DDVNEGLSTT 780 781 DLLSFTYQVA KGMEFLASKN CVHRDLAARN VLLSQGKMVK ICDFGLARDI MHDSNYVSKG 840 841 STFLPVKWMA PESIFDNMYT TLSDVWSYGI LLWEIFSLGG TPYPGMVVDS SFYNKIKSGY 900 901 RMSKPELAPD DVYEMMMKCW NSECELDRTC AYLLEGDFTR HYERVNREFL KSDHPAVTRV 960 961 CAESDDVYVG ISSKNKKLKD RESGFDEQRL SSDSGYIIPL PDLEPPSDDE YGKRNRHGSQ 1020 1021 TSEESAIETG SSSSTYAKRE GETLEDITLL DEMCLDCSDL GEDSFL 1066 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGATGCGG TGAGGACTCG TGTCGTCTTT GGGGGTTTCC TGGTGGTGCT GGTTTCAGTT 60 61 ACTTCCGGTC TGTCGCCACC GATCATCGTT TCCAACGAAG AAGAGTTCGT CCTGCGGCCG 120 121 AACGCCGCCT TCAACATCAG CTGCACCGGC AAGAAGAGCG TGATTTGGGT GCCGCCGCTC 180 181 CCGGAGAACA GCTTCGTGGA GTCGGGCTAC AACACGGCGA CGCTCTTCAT TTACAACGCC 240 241 AGCGTTGAAA ACACCGACTA CTACATGTGC ACCTACGGGT CCCTGGAGGG CGAACCGGAA 300 301 GAAGAGAATG AGGCGGGAAT ATACGTCTTC GTAGCAGATC CCCAGTTTCC CTTCGTCCCC 360 361 GAGGCCCCCG ACAACCTGCT GGTCCCCATG AACACGATGG GGGTCCCCAT CTCCTGCCGC 420 421 GTGTCGGACC CTTACTCCCA CGTCACCCTG ACGAGCGTCC CCAGCAGGGA GGAGATCCAC 480 481 ACCTTCTACG ACAACAAGAT GGGCTTCTTC GGCAGCCTGT CGCCCGGGCG GTACCGGTGT 540 541 GAAACCACGG TGAACGGCGC CGCGATCACC AGCGACGTCT ACACCGTGTA CACCGACGCC 600 601 GGCGGCGCCC CGCTGCACGT GGAGCTGAGC GCAGAGCGGA CCGCTCTGCT GGTGGGAGAC 660 661 GCCGTCACCG TCACCTGTGT GGCTCGGGGG TCCGAGATTC TGGAGGACCA CTGGAAATAC 720 721 CCTGGAAAAC TGGCGAATCG CGGGATCAAA GCGGTGGAAG ACATCCAGAA GCTTCAGGAG 780 781 ATCCGCTACA CCCTGACCAT CCCGCAGGCC TCCGTCAAGG ACAGCGGCAT CTACTCGTGC 840 841 TCCATCACCG ACATCGTCAG CGGCGAGAGC CAGACCAAGG AGGTGGCCGT TCGAGTGTTC 900 901 GCGAGCGAGT TCCTGTCCGT CTGGCCGCAG TTCGGAGAAG ACGAGTCGGC GGAGCTGGAC 960 961 GAGGTCCGGG AGTTCAGGGC CGAGATCAGC GCCTTCCCCG CCGCTCGCGT CACCTGGCTC 1020 1021 AAGGACGGCG TCGCGCTCAG CGACGTGACG GCGGAGATCG GCCTCCGTCA GCTCAGCGAA 1080 1081 ACCAGCTACA TGAGCGTTCT CACCCTGATC CGGGCCAAGG AGGAGGACAG CGGGAACTAC 1140 1141 ACCATGCGGG TGGAGAACGG AGACCAGAGA CGCGACGTCG GCCTGATGCT GCAGGTCAAA 1200 1201 GTGCCCGCAG TCATCGTGGA CCTGATGGAC ATCCACCACG GCGCCGCCAC CGGCCAGTCG 1260 1261 GTGGTGTGCA TCACCCGAGG GGAGCCCCTC CCGCTGGTGG AGTGGTTCGT CTGCAAGAAC 1320 1321 ATCAAACATT GTGCCAACGA CTCGTTGGCT TGGGAGCCGC TTCCCGCCAA CTCCACGGGG 1380 1381 GTCACGGCGG AGTCGCACGT CAACGAGGAC GGCAACCTGG AGAGCCAGGT CATGTTCGGC 1440 1441 CACCTGGAGA GCACGCTGGC CGTGCGCTGC CTGTCCCGCA ACGGCATGGC CGCCGTCAGC 1500 1501 AGGGAGGTCA AGCTGGTGTC CAGTGGTGGG CCTCACCCGG AGCTGACTGT CGCCGCCGCC 1560 1561 GTGCTGGTGC TGCTGGTCAT TGTCATCATC TCACTCATTG TGTTGGTTGT TATCTGGAAG 1620 1621 CAGAAGCCGC GCTATGAGAT CCGCTGGAGG GTCATTGAGT CGGTGAGTCC CGACGGACAC 1680 1681 GAGTACATCT ACGTGGATCC CATGCAGCTT CCCTACGACT CCCGGTGGGA GTTCCCCCGA 1740 1741 GACCGGCTGG TGCTCGGTCG CATCCTGGGC TCCGGAGCCT TCGGGAAGGT GGTGGAGGGC 1800 1801 ACCGCCTACG GGCTCGGCCG CTCGCAGCCC GTCATGAAGG TGGCCGTGAA GATGCTGAAA 1860 1861 CCCACAGCGC GCTCGAGTGA GAAGCAGGCG CTGATGTCAG AACTGAAGAT CATGACCCAT 1920 1921 CTCGGGCCGC ACCTCAACAT CGTTAACCTC CTGGGAGCCT GCACCAAATC AGGGCCCATC 1980 1981 TACATCATCA CGGAGTACTG CTTCTACGGG GACCTGGTCA ACTACCTGCA CAAGAACAGG 2040 2041 GAGAACTTCC TCAGCCTGAA CCCGGAGAAG ACCAAGAAAG AGGTGGACAT CTTTGGGATC 2100 2101 AACCCTGCAG ATGAGAGCAG CAGGAGCTAC GTCATCCTGT CTTTGGAGAG CAAAGCCGAC 2160 2161 TACATGGACA TGAAGCAAGG CGACGGCACG CAATACGTCC CCCTGCTGGA GATGAGGGAC 2220 2221 GCCTCCAAGT ATTCCGACAT CCAGAGGTCC GAGTACGACC CCCCCCCCTC CCAAAAAGGT 2280 2281 ACGCTTACAC CAGAGGACGA GCTGCTGTCA GACGACGTGA ACGAGGGCCT CAGCACCACC 2340 2341 GACCTGCTCA GCTTCACCTA CCAGGTGGCC AAAGGCATGG AGTTCCTGGC CTCCAAGAAT 2400 2401 TGCGTCCATC GGGACCTGGC CGCCAGGAAT GTCCTCCTCT CTCAGGGCAA GATGGTGAAG 2460 2461 ATCTGTGACT TCGGACTGGC CCGGGACATC ATGCACGACA GCAACTACGT CTCCAAAGGG 2520 2521 AGCACGTTCC TGCCCGTGAA GTGGATGGCC CCCGAGAGCA TCTTTGACAA CATGTACACC 2580 2581 ACCCTGAGTG ACGTGTGGTC CTACGGCATC CTGCTGTGGG AGATCTTCTC GTTGGGTGGA 2640 2641 ACCCCGTACC CGGGGATGGT CGTGGACTCC AGCTTCTACA ACAAGATCAA GAGTGGATAC 2700 2701 AGGATGTCCA AACCGGAGCT GGCCCCCGAC GACGTGTACG AGATGATGAT GAAGTGCTGG 2760 2761 AACAGCGAGT GTGAATTAGA CCGCACTTGT GCATATCTTT TAGAAGGTGA TTTCACAAGA 2820 2821 CACTACGAGC GGGTGAACCG CGAGTTCCTG AAGAGCGACC ACCCCGCCGT CACCCGGGTG 2880 2881 TGCGCGGAGA GCGACGACGT CTACGTCGGC ATCAGCAGCA AGAACAAGAA GCTGAAGGAT 2940 2941 CGAGAGAGCG GCTTCGACGA GCAGCGGCTG AGCTCCGACA GCGGCTACAT CATCCCGCTG 3000 3001 CCCGACCTGG AGCCGCCCTC CGACGACGAG TACGGGAAGA GGAACCGGCA CGGCTCTCAG 3060 3061 ACGTCGGAGG AGAGCGCCAT CGAGACGGGC TCCAGCAGCT CCACCTACGC CAAGCGCGAG 3120 3121 GGGGAGACCC TGGAGGACAT CACGCTGCTG GACGAGATGT GTCTGGACTG CAGCGACCTG 3180 3181 GGGGAGGACA GCTTCCTGTG A 3201 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Ten-1048 | Tetraodon nigroviridis | 80.32 | 0.0 | 1657 |
| LLPS-Scm-3327 | Scophthalmus maximus | 75.95 | 0.0 | 1550 |
| LLPS-Tar-2456 | Takifugu rubripes | 75.36 | 0.0 | 1515 |
| LLPS-Orn-2150 | Oreochromis niloticus | 74.41 | 0.0 | 1508 |
| LLPS-Orl-3818 | Oryzias latipes | 73.89 | 0.0 | 1482 |
| LLPS-Pof-0050 | Poecilia formosa | 72.8 | 0.0 | 1459 |
| LLPS-Xim-0475 | Xiphophorus maculatus | 72.11 | 0.0 | 1452 |
| LLPS-Scf-2109 | Scleropages formosus | 68.68 | 0.0 | 1362 |
| LLPS-Asm-1191 | Astyanax mexicanus | 67.62 | 0.0 | 1286 |
| LLPS-Dar-2343 | Danio rerio | 66.89 | 0.0 | 1333 |
| LLPS-Icp-2265 | Ictalurus punctatus | 66.57 | 0.0 | 1346 |
| LLPS-Leo-3842 | Lepisosteus oculatus | 66.51 | 0.0 | 1339 |
| LLPS-Xet-0772 | Xenopus tropicalis | 63.28 | 3e-180 | 563 |
| LLPS-Meg-1943 | Meleagris gallopavo | 61.09 | 0.0 | 1208 |
| LLPS-Anp-1563 | Anas platyrhynchos | 61.05 | 0.0 | 1214 |
| LLPS-Gaga-3669 | Gallus gallus | 60.9 | 0.0 | 1205 |
| LLPS-Anc-3659 | Anolis carolinensis | 60.79 | 0.0 | 1210 |
| LLPS-Fia-1468 | Ficedula albicollis | 60.62 | 0.0 | 1201 |
| LLPS-Cea-4495 | Cercocebus atys | 60.33 | 0.0 | 1115 |
| LLPS-Pes-3318 | Pelodiscus sinensis | 59.68 | 0.0 | 1179 |
| LLPS-Lac-3940 | Latimeria chalumnae | 59.16 | 0.0 | 1152 |
| LLPS-Mod-4244 | Monodelphis domestica | 58.74 | 0.0 | 1189 |
| LLPS-Cap-0047 | Cavia porcellus | 58.58 | 0.0 | 1166 |
| LLPS-Loa-2487 | Loxodonta africana | 58.56 | 0.0 | 1155 |
| LLPS-Mea-3573 | Mesocricetus auratus | 58.48 | 0.0 | 1174 |
| LLPS-Aon-4759 | Aotus nancymaae | 58.39 | 0.0 | 1162 |
| LLPS-Mum-3455 | Mus musculus | 58.36 | 0.0 | 1173 |
| LLPS-Sah-2335 | Sarcophilus harrisii | 58.36 | 0.0 | 1178 |
| LLPS-Sus-4457 | Sus scrofa | 58.29 | 0.0 | 1155 |
| LLPS-Fec-4498 | Felis catus | 58.29 | 0.0 | 1161 |
| LLPS-Ict-0950 | Ictidomys tridecemlineatus | 58.29 | 0.0 | 1154 |
| LLPS-Caf-3163 | Canis familiaris | 58.29 | 0.0 | 1156 |
| LLPS-Eqc-1732 | Equus caballus | 58.29 | 0.0 | 1156 |
| LLPS-Gog-1694 | Gorilla gorilla | 58.2 | 0.0 | 1157 |
| LLPS-Caj-0997 | Callithrix jacchus | 58.2 | 0.0 | 1158 |
| LLPS-Aim-1280 | Ailuropoda melanoleuca | 58.2 | 0.0 | 1164 |
| LLPS-Dio-3522 | Dipodomys ordii | 58.2 | 0.0 | 1147 |
| LLPS-Poa-2219 | Pongo abelii | 58.2 | 0.0 | 1154 |
| LLPS-Rhb-3734 | Rhinopithecus bieti | 58.11 | 0.0 | 1152 |
| LLPS-Maf-1778 | Macaca fascicularis | 58.01 | 0.0 | 1150 |
| LLPS-Paa-2477 | Papio anubis | 58.01 | 0.0 | 1150 |
| LLPS-Mam-1202 | Macaca mulatta | 58.01 | 0.0 | 1150 |
| LLPS-Fud-3105 | Fukomys damarensis | 57.93 | 0.0 | 1150 |
| LLPS-Cas-2905 | Carlito syrichta | 57.93 | 0.0 | 1136 |
| LLPS-Mal-1528 | Mandrillus leucophaeus | 57.92 | 0.0 | 1145 |
| LLPS-Pap-0234 | Pan paniscus | 57.92 | 0.0 | 1155 |
| LLPS-Hos-1235 | Homo sapiens | 57.92 | 0.0 | 1153 |
| LLPS-Man-4546 | Macaca nemestrina | 57.92 | 0.0 | 1149 |
| LLPS-Chs-1425 | Chlorocebus sabaeus | 57.83 | 0.0 | 1147 |
| LLPS-Pat-2368 | Pan troglodytes | 57.83 | 0.0 | 1151 |
| LLPS-Ran-2665 | Rattus norvegicus | 57.8 | 0.0 | 1160 |
| LLPS-Myl-3475 | Myotis lucifugus | 57.69 | 0.0 | 1150 |
| LLPS-Otg-3477 | Otolemur garnettii | 57.6 | 0.0 | 1140 |
| LLPS-Ora-2029 | Ornithorhynchus anatinus | 57.5 | 0.0 | 886 |
| LLPS-Tag-1014 | Taeniopygia guttata | 57.37 | 0.0 | 1103 |
| LLPS-Ova-3029 | Ovis aries | 57.3 | 0.0 | 1145 |
| LLPS-Bot-4437 | Bos taurus | 57.27 | 0.0 | 1087 |
| LLPS-Mup-0537 | Mustela putorius furo | 56.41 | 0.0 | 1094 |
| LLPS-Nol-3995 | Nomascus leucogenys | 55.87 | 0.0 | 1085 |
| LLPS-Orc-1003 | Oryctolagus cuniculus | 55.75 | 0.0 | 1078 |