LLPS-Sol-1567
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Ensembl Gene: | Solyc11g062430.2 |
Ensembl Protein: | Solyc11g062430.2.1 |
Organism: | Solanum lycopersicum |
Taxa ID: | 4081 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Chromatin, Nuclear speckle, Nucleolus, Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MGSDADMEDY GFEYSEEEPE EQDVDIENQY YNSKGLAETD PEAALEGFAE VVRMEPEKAD 60 61 WGFKALKQTV KLYYKLGKYK GMMDAYREML TYIKSAVTRN YSEKCINNIM DFVSGSASQN 120 121 FDLLQEFYQT TLKALEEAKN ERLWFKTNLK LCKIWFDIGE YGRMNKILKE LHKSCQKEDG 180 181 TDDQKKGTQL LEVYAIEIQM YTETKNNKKL KELYTKALSV KSAIPHPRIM GIIRECGGKM 240 241 HMAERQWAEA ATDFFEAFKN YDEAGNQRRI QCLKYLVLAN MLMESEVNPF DGQEAKPYKN 300 301 DPEILAMTNL IAAYQRNEIL EFEKILKSNR RTIMDDPFIR NYIEDLLRNV RTQVLLKIIK 360 361 PYTRIRIPFI SKELNVPEKD VGELLVSLIL DNRINGHIDQ VNRLLECGDR SKGMKKYAAI 420 421 DKWNTQLRSL YRTVGNRVC 439 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGGCTCTG ATGCAGATAT GGAGGACTAT GGATTCGAGT ATTCAGAGGA GGAACCTGAA 60 61 GAGCAGGATG TTGATATTGA GAACCAATAC TACAACTCCA AAGGCTTGGC TGAAACAGAC 120 121 CCAGAGGCAG CACTTGAGGG TTTTGCTGAA GTAGTTCGTA TGGAACCTGA GAAGGCTGAT 180 181 TGGGGATTTA AAGCCTTAAA GCAAACTGTT AAGCTTTACT ATAAGCTAGG GAAGTACAAG 240 241 GGAATGATGG ACGCTTACAG AGAAATGCTA ACCTACATCA AGTCAGCTGT GACAAGAAAT 300 301 TATAGTGAAA AGTGTATAAA CAATATCATG GATTTCGTCT CAGGATCAGC TAGTCAGAAC 360 361 TTTGATCTCC TACAAGAGTT CTACCAAACA ACATTGAAAG CCCTTGAAGA GGCAAAAAAC 420 421 GAGAGGTTGT GGTTCAAGAC AAATCTAAAA CTTTGCAAAA TATGGTTTGA CATTGGGGAG 480 481 TATGGACGAA TGAATAAGAT TTTGAAAGAA CTCCACAAAT CTTGTCAAAA AGAAGATGGT 540 541 ACTGATGACC AGAAGAAAGG TACACAATTG TTGGAGGTAT ATGCAATAGA GATCCAAATG 600 601 TACACGGAGA CAAAAAATAA CAAAAAACTG AAGGAACTAT ACACTAAAGC ACTTTCAGTC 660 661 AAGTCAGCAA TCCCTCACCC AAGAATAATG GGAATAATTC GTGAATGTGG AGGAAAAATG 720 721 CATATGGCAG AGCGGCAGTG GGCAGAGGCA GCTACGGACT TCTTTGAAGC TTTCAAGAAC 780 781 TATGATGAAG CTGGGAATCA GAGGCGCATC CAGTGTCTAA AGTACTTGGT TCTGGCAAAT 840 841 ATGCTGATGG AGTCTGAGGT TAACCCTTTT GATGGCCAAG AAGCAAAACC GTACAAAAAT 900 901 GACCCTGAGA TACTGGCAAT GACTAACCTT ATAGCAGCAT ATCAACGAAA TGAGATCTTA 960 961 GAGTTTGAGA AAATTCTTAA GAGTAATAGA AGAACAATAA TGGATGATCC CTTCATCAGA 1020 1021 AATTACATTG AAGATCTTTT AAGAAATGTC AGAACCCAAG TGCTGCTGAA GATCATTAAG 1080 1081 CCTTACACAA GAATCCGGAT TCCCTTCATT TCCAAGGAGC TTAATGTGCC AGAAAAAGAC 1140 1141 GTCGGGGAGT TGTTGGTCTC ACTCATCTTG GACAACCGTA TCAATGGGCA CATTGATCAA 1200 1201 GTGAACCGGT TGCTAGAATG TGGAGATAGA TCTAAAGGAA TGAAGAAATA CGCTGCCATC 1260 1261 GACAAATGGA ACACACAACT TAGGTCTTTG TACCGAACTG TTGGCAACAG AGTATGTTGA 1320 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Nia-0272 | Nicotiana attenuata | 97.04 | 0.0 | 814 |
LLPS-Prp-2298 | Prunus persica | 93.61 | 0.0 | 788 |
LLPS-Coc-1126 | Corchorus capsularis | 93.58 | 0.0 | 783 |
LLPS-Thc-0804 | Theobroma cacao | 93.38 | 0.0 | 786 |
LLPS-Pot-0506 | Populus trichocarpa | 93.15 | 0.0 | 785 |
LLPS-Mua-1681 | Musa acuminata | 92.94 | 0.0 | 778 |
LLPS-Mae-1538 | Manihot esculenta | 92.92 | 0.0 | 781 |
LLPS-Gor-0828 | Gossypium raimondii | 92.71 | 0.0 | 784 |
LLPS-Cus-1192 | Cucumis sativus | 92.42 | 4e-112 | 340 |
LLPS-Hea-1261 | Helianthus annuus | 92.24 | 0.0 | 781 |
LLPS-Amt-1405 | Amborella trichopoda | 91.97 | 0.0 | 780 |
LLPS-Viv-1538 | Vitis vinifera | 91.73 | 0.0 | 768 |
LLPS-Phv-2425 | Phaseolus vulgaris | 91.32 | 0.0 | 771 |
LLPS-Ors-0023 | Oryza sativa | 91.32 | 0.0 | 774 |
LLPS-Sei-0615 | Setaria italica | 91.32 | 0.0 | 774 |
LLPS-Tra-2936 | Triticum aestivum | 91.32 | 0.0 | 777 |
LLPS-Ori-1078 | Oryza indica | 91.32 | 0.0 | 774 |
LLPS-Hov-0216 | Hordeum vulgare | 91.24 | 0.0 | 771 |
LLPS-Orbr-0550 | Oryza brachyantha | 91.1 | 0.0 | 776 |
LLPS-Sob-2340 | Sorghum bicolor | 91.1 | 0.0 | 770 |
LLPS-Orp-0803 | Oryza punctata | 91.1 | 0.0 | 773 |
LLPS-Vir-0269 | Vigna radiata | 91.1 | 0.0 | 771 |
LLPS-Via-1305 | Vigna angularis | 91.1 | 0.0 | 771 |
LLPS-Orm-0304 | Oryza meridionalis | 91.09 | 0.0 | 753 |
LLPS-Orr-1210 | Oryza rufipogon | 90.86 | 0.0 | 751 |
LLPS-Orgl-1642 | Oryza glumaepatula | 90.86 | 0.0 | 751 |
LLPS-Glm-2395 | Glycine max | 90.37 | 0.0 | 761 |
LLPS-Brd-1494 | Brachypodium distachyon | 90.27 | 0.0 | 764 |
LLPS-Tru-0727 | Triticum urartu | 90.22 | 0.0 | 757 |
LLPS-Dac-0426 | Daucus carota | 90.21 | 0.0 | 773 |
LLPS-Met-1816 | Medicago truncatula | 90.18 | 0.0 | 766 |
LLPS-Sot-0190 | Solanum tuberosum | 89.04 | 0.0 | 761 |
LLPS-Arl-0274 | Arabidopsis lyrata | 87.24 | 0.0 | 738 |
LLPS-Php-1750 | Physcomitrella patens | 86.99 | 0.0 | 740 |
LLPS-Art-2358 | Arabidopsis thaliana | 86.33 | 0.0 | 729 |
LLPS-Lep-1492 | Leersia perrieri | 86.33 | 0.0 | 763 |
LLPS-Orni-0837 | Oryza nivara | 86.18 | 0.0 | 738 |
LLPS-Orb-2005 | Oryza barthii | 86.18 | 0.0 | 738 |
LLPS-Bro-0862 | Brassica oleracea | 86.07 | 0.0 | 726 |
LLPS-Brn-1103 | Brassica napus | 86.07 | 0.0 | 726 |
LLPS-Sem-0594 | Selaginella moellendorffii | 86.07 | 0.0 | 743 |
LLPS-Brr-1037 | Brassica rapa | 85.98 | 0.0 | 718 |
LLPS-Zem-0535 | Zea mays | 85.56 | 0.0 | 749 |
LLPS-Chr-0648 | Chlamydomonas reinhardtii | 67.87 | 0.0 | 586 |
LLPS-Ora-0094 | Ornithorhynchus anatinus | 67.21 | 9e-180 | 514 |
LLPS-Fia-2176 | Ficedula albicollis | 66.76 | 4e-178 | 510 |
LLPS-Anc-2501 | Anolis carolinensis | 66.24 | 0.0 | 537 |
LLPS-Gas-0373 | Galdieria sulphuraria | 65.96 | 3e-172 | 497 |
LLPS-Sah-1083 | Sarcophilus harrisii | 65.53 | 0.0 | 563 |
LLPS-Ict-2886 | Ictidomys tridecemlineatus | 65.29 | 0.0 | 563 |
LLPS-Gaga-2065 | Gallus gallus | 65.29 | 0.0 | 563 |
LLPS-Poa-1926 | Pongo abelii | 65.29 | 0.0 | 563 |
LLPS-Caf-2153 | Canis familiaris | 65.29 | 0.0 | 563 |
LLPS-Eqc-0620 | Equus caballus | 65.29 | 0.0 | 564 |
LLPS-Cap-0183 | Cavia porcellus | 65.29 | 0.0 | 563 |
LLPS-Pes-0505 | Pelodiscus sinensis | 65.29 | 0.0 | 563 |
LLPS-Anp-1587 | Anas platyrhynchos | 65.29 | 0.0 | 562 |
LLPS-Urm-3743 | Ursus maritimus | 65.29 | 0.0 | 563 |
LLPS-Lac-2068 | Latimeria chalumnae | 65.29 | 0.0 | 559 |
LLPS-Mup-1736 | Mustela putorius furo | 65.29 | 0.0 | 563 |
LLPS-Ova-2248 | Ovis aries | 65.29 | 0.0 | 563 |
LLPS-Ran-3006 | Rattus norvegicus | 65.29 | 0.0 | 563 |
LLPS-Asm-3112 | Astyanax mexicanus | 65.29 | 0.0 | 563 |
LLPS-Fud-2708 | Fukomys damarensis | 65.29 | 0.0 | 563 |
LLPS-Sus-1032 | Sus scrofa | 65.29 | 0.0 | 563 |
LLPS-Leo-1352 | Lepisosteus oculatus | 65.29 | 0.0 | 562 |
LLPS-Chs-0453 | Chlorocebus sabaeus | 65.29 | 0.0 | 563 |
LLPS-Orn-1875 | Oreochromis niloticus | 65.21 | 0.0 | 559 |
LLPS-Pof-0206 | Poecilia formosa | 65.21 | 0.0 | 559 |
LLPS-Scm-1252 | Scophthalmus maximus | 65.21 | 0.0 | 559 |
LLPS-Gaa-0347 | Gasterosteus aculeatus | 65.21 | 0.0 | 559 |
LLPS-Xim-3769 | Xiphophorus maculatus | 65.21 | 0.0 | 559 |
LLPS-Orl-1856 | Oryzias latipes | 65.21 | 0.0 | 560 |
LLPS-Dar-0237 | Danio rerio | 65.05 | 0.0 | 562 |
LLPS-Scf-3837 | Scleropages formosus | 65.05 | 0.0 | 562 |
LLPS-Tag-1829 | Taeniopygia guttata | 64.98 | 0.0 | 557 |
LLPS-Tar-0170 | Takifugu rubripes | 64.96 | 0.0 | 558 |
LLPS-Ten-1850 | Tetraodon nigroviridis | 64.81 | 0.0 | 548 |
LLPS-Mod-2242 | Monodelphis domestica | 64.75 | 0.0 | 560 |
LLPS-Chc-1142 | Chondrus crispus | 64.65 | 0.0 | 535 |
LLPS-Nol-3162 | Nomascus leucogenys | 64.51 | 0.0 | 560 |
LLPS-Mam-1836 | Macaca mulatta | 64.51 | 0.0 | 560 |
LLPS-Orc-2254 | Oryctolagus cuniculus | 64.51 | 0.0 | 560 |
LLPS-Rhb-2295 | Rhinopithecus bieti | 64.51 | 0.0 | 560 |
LLPS-Man-4323 | Macaca nemestrina | 64.51 | 0.0 | 560 |
LLPS-Loa-2985 | Loxodonta africana | 64.51 | 0.0 | 561 |
LLPS-Pat-2774 | Pan troglodytes | 64.51 | 0.0 | 560 |
LLPS-Pap-0477 | Pan paniscus | 64.51 | 0.0 | 560 |
LLPS-Hos-1080 | Homo sapiens | 64.51 | 0.0 | 560 |
LLPS-Fec-2168 | Felis catus | 64.51 | 0.0 | 560 |
LLPS-Paa-2459 | Papio anubis | 64.51 | 0.0 | 560 |
LLPS-Mal-0030 | Mandrillus leucophaeus | 64.51 | 0.0 | 560 |
LLPS-Aim-1197 | Ailuropoda melanoleuca | 64.51 | 0.0 | 560 |
LLPS-Bot-2932 | Bos taurus | 64.51 | 0.0 | 560 |
LLPS-Caj-2103 | Callithrix jacchus | 64.51 | 0.0 | 560 |
LLPS-Gog-4294 | Gorilla gorilla | 64.51 | 0.0 | 560 |
LLPS-Cea-0493 | Cercocebus atys | 64.51 | 0.0 | 560 |
LLPS-Aon-3940 | Aotus nancymaae | 64.51 | 0.0 | 560 |
LLPS-Mea-0150 | Mesocricetus auratus | 64.51 | 0.0 | 560 |
LLPS-Maf-0151 | Macaca fascicularis | 64.51 | 0.0 | 560 |
LLPS-Mum-0711 | Mus musculus | 64.51 | 0.0 | 560 |
LLPS-Tut-0240 | Tursiops truncatus | 63.79 | 0.0 | 538 |
LLPS-Cii-1886 | Ciona intestinalis | 63.59 | 0.0 | 535 |
LLPS-Myl-3921 | Myotis lucifugus | 63.16 | 0.0 | 544 |
LLPS-Cis-0972 | Ciona savignyi | 63.11 | 0.0 | 531 |
LLPS-Otg-1666 | Otolemur garnettii | 62.44 | 0.0 | 539 |
LLPS-Abg-1250 | Absidia glauca | 62.16 | 0.0 | 530 |
LLPS-Icp-0662 | Ictalurus punctatus | 61.89 | 0.0 | 550 |
LLPS-Cas-2670 | Carlito syrichta | 61.41 | 0.0 | 533 |
LLPS-Drm-1598 | Drosophila melanogaster | 60.77 | 4e-178 | 513 |
LLPS-Osl-0120 | Ostreococcus lucimarinus | 60.67 | 0.0 | 523 |
LLPS-Meg-1674 | Meleagris gallopavo | 60.53 | 5e-177 | 509 |
LLPS-Miv-0145 | Microbotryum violaceum | 56.97 | 4e-160 | 469 |
LLPS-Spr-0591 | Sporisorium reilianum | 56.83 | 3e-165 | 481 |
LLPS-Usm-0990 | Ustilago maydis | 56.1 | 4e-165 | 481 |
LLPS-Cae-1018 | Caenorhabditis elegans | 55.5 | 8e-154 | 452 |
LLPS-Ved-0536 | Verticillium dahliae | 53.4 | 1e-139 | 416 |
LLPS-Coo-0681 | Colletotrichum orbiculare | 53.33 | 1e-142 | 424 |
LLPS-Scs-0885 | Sclerotinia sclerotiorum | 53.3 | 2e-151 | 446 |
LLPS-Beb-0159 | Beauveria bassiana | 53.02 | 5e-148 | 437 |
LLPS-Asni-1133 | Aspergillus niger | 52.8 | 1e-152 | 449 |
LLPS-Asfu-1552 | Aspergillus fumigatus | 52.57 | 3e-152 | 449 |
LLPS-Dio-2218 | Dipodomys ordii | 52.43 | 5e-138 | 409 |
LLPS-Nef-0670 | Neosartorya fischeri | 52.32 | 2e-151 | 447 |
LLPS-Mel-1270 | Melampsora laricipopulina | 52.27 | 1e-146 | 434 |
LLPS-Asc-0871 | Aspergillus clavatus | 52.08 | 2e-151 | 447 |
LLPS-Fuo-0225 | Fusarium oxysporum | 51.83 | 3e-148 | 438 |
LLPS-Fuv-0614 | Fusarium verticillioides | 51.83 | 3e-147 | 436 |
LLPS-Phn-0434 | Phaeosphaeria nodorum | 51.82 | 2e-149 | 442 |
LLPS-Fus-1544 | Fusarium solani | 51.82 | 4e-145 | 431 |
LLPS-Asf-1005 | Aspergillus flavus | 51.82 | 3e-151 | 446 |
LLPS-Aso-0645 | Aspergillus oryzae | 51.82 | 2e-151 | 447 |
LLPS-Mao-0755 | Magnaporthe oryzae | 51.77 | 6e-146 | 434 |
LLPS-Nec-0562 | Neurospora crassa | 51.69 | 1e-139 | 416 |
LLPS-Trv-1417 | Trichoderma virens | 51.59 | 8e-145 | 430 |
LLPS-Ast-0379 | Aspergillus terreus | 51.34 | 8e-150 | 443 |
LLPS-Cogr-1393 | Colletotrichum graminicola | 51.21 | 3e-142 | 423 |
LLPS-Asn-1000 | Aspergillus nidulans | 51.1 | 5e-148 | 438 |
LLPS-Cog-0836 | Colletotrichum gloeosporioides | 50.86 | 8e-142 | 422 |
LLPS-Zyt-0869 | Zymoseptoria tritici | 50.61 | 1e-144 | 429 |
LLPS-Put-1062 | Puccinia triticina | 50.48 | 6e-141 | 419 |
LLPS-Dos-0215 | Dothistroma septosporum | 50.36 | 1e-145 | 432 |
LLPS-Pyt-0699 | Pyrenophora teres | 50.36 | 2e-138 | 413 |
LLPS-Pytr-0426 | Pyrenophora triticirepentis | 50.12 | 1e-137 | 411 |
LLPS-Lem-0048 | Leptosphaeria maculans | 50.12 | 7e-136 | 406 |
LLPS-Pug-1045 | Puccinia graminis | 49.76 | 2e-139 | 415 |
LLPS-Crn-0683 | Cryptococcus neoformans | 49.76 | 5e-141 | 419 |
LLPS-Gag-1028 | Gaeumannomyces graminis | 49.63 | 2e-140 | 419 |
LLPS-Blg-0636 | Blumeria graminis | 49.52 | 6e-138 | 412 |
LLPS-Map-0943 | Magnaporthe poae | 49.25 | 1e-138 | 415 |
LLPS-Tum-0357 | Tuber melanosporum | 47.24 | 2e-119 | 362 |
LLPS-Scj-0619 | Schizosaccharomyces japonicus | 47.11 | 2e-119 | 363 |
LLPS-Scp-0305 | Schizosaccharomyces pombe | 46.53 | 7e-124 | 374 |
LLPS-Scc-1366 | Schizosaccharomyces cryophilus | 45.26 | 2e-118 | 360 |
LLPS-Cym-0994 | Cyanidioschyzon merolae | 34.3 | 7e-32 | 132 |
LLPS-Yal-1220 | Yarrowia lipolytica | 33.85 | 1e-62 | 219 |
LLPS-Kop-0041 | Komagataella pastoris | 27.44 | 2e-38 | 151 |