LLPS-Sol-0910
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc04g007890.3 |
| Ensembl Protein: | Solyc04g007890.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MATEEHNLTL PSYPDMIMEA IDALNEEEGS NKSAIWKQIE ATHGTLPPAH GTLLAHHLNQ 60 61 MKQAGQLVML KNNYMKPNPN APPRRGRGRP PKPKSSVPVP DGYPRPRGRP PKERDPYAPI 120 121 TVPMKKTSEG SSGGSGKKRG RPRKYPMTED TPVVKPIGAP RGRGRPPKVK TPVAATVGA 179 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTACTG AAGAACATAA TCTAACTTTG CCTAGTTATC CTGATATGAT TATGGAAGCT 60 61 ATAGATGCGT TGAATGAAGA AGAAGGGTCG AATAAATCAG CTATATGGAA GCAAATTGAA 120 121 GCGACTCATG GTACACTACC ACCAGCGCAT GGTACACTCC TTGCACATCA TTTGAATCAA 180 181 ATGAAGCAAG CTGGGCAATT AGTTATGTTG AAGAACAACT ACATGAAGCC AAATCCAAAC 240 241 GCGCCGCCGC GCCGTGGTAG AGGCCGTCCG CCGAAGCCGA AAAGTTCAGT TCCGGTACCG 300 301 GATGGGTATC CTAGACCACG TGGAAGGCCA CCGAAGGAGC GGGATCCGTA CGCGCCGATA 360 361 ACGGTACCTA TGAAGAAGAC GAGTGAGGGT AGCTCTGGGG GAAGTGGGAA GAAGCGTGGA 420 421 AGGCCAAGGA AGTATCCGAT GACGGAGGAT ACGCCGGTGG TGAAGCCAAT TGGTGCTCCG 480 481 AGAGGAAGAG GAAGGCCGCC GAAGGTGAAA ACTCCGGTAG CTGCAACTGT AGGGGCTTAA 540 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-1993 | Solanum tuberosum | 84.04 | 8e-52 | 171 |
| LLPS-Pot-1219 | Populus trichocarpa | 74.6 | 4e-27 | 107 |
| LLPS-Mae-1778 | Manihot esculenta | 70.15 | 1e-25 | 103 |
| LLPS-Viv-1661 | Vitis vinifera | 69.84 | 5e-23 | 95.9 |
| LLPS-Prp-1544 | Prunus persica | 68.66 | 7e-25 | 100 |
| LLPS-Cus-2261 | Cucumis sativus | 66.67 | 6e-22 | 93.2 |
| LLPS-Thc-2224 | Theobroma cacao | 62.79 | 5e-26 | 103 |
| LLPS-Brd-1333 | Brachypodium distachyon | 62.3 | 2e-20 | 89.0 |
| LLPS-Coc-2312 | Corchorus capsularis | 61.63 | 1e-25 | 102 |
| LLPS-Lep-0569 | Leersia perrieri | 60.61 | 4e-20 | 88.6 |
| LLPS-Brr-2814 | Brassica rapa | 60.0 | 2e-15 | 75.1 |
| LLPS-Brn-0628 | Brassica napus | 59.74 | 7e-24 | 98.6 |
| LLPS-Met-1861 | Medicago truncatula | 59.74 | 9e-22 | 92.8 |
| LLPS-Art-1317 | Arabidopsis thaliana | 59.46 | 4e-24 | 99.4 |
| LLPS-Arl-0313 | Arabidopsis lyrata | 59.46 | 3e-25 | 102 |
| LLPS-Bro-2062 | Brassica oleracea | 59.21 | 7e-24 | 98.6 |
| LLPS-Ors-1823 | Oryza sativa | 59.02 | 3e-18 | 82.8 |
| LLPS-Orr-1848 | Oryza rufipogon | 59.02 | 9e-17 | 81.6 |
| LLPS-Orni-0110 | Oryza nivara | 59.02 | 3e-18 | 82.8 |
| LLPS-Orgl-1370 | Oryza glumaepatula | 59.02 | 1e-17 | 82.4 |
| LLPS-Glm-0541 | Glycine max | 58.44 | 2e-19 | 86.3 |
| LLPS-Mua-1045 | Musa acuminata | 58.33 | 7e-17 | 79.0 |
| LLPS-Tra-2081 | Triticum aestivum | 58.21 | 4e-19 | 85.1 |
| LLPS-Gor-0939 | Gossypium raimondii | 57.65 | 5e-24 | 98.6 |
| LLPS-Orm-0762 | Oryza meridionalis | 56.06 | 1e-16 | 78.6 |
| LLPS-Hea-2371 | Helianthus annuus | 56.06 | 2e-20 | 90.1 |
| LLPS-Orp-1318 | Oryza punctata | 56.0 | 1e-20 | 89.7 |
| LLPS-Dac-1491 | Daucus carota | 55.56 | 5e-19 | 85.5 |
| LLPS-Nia-1387 | Nicotiana attenuata | 54.55 | 2e-18 | 82.8 |
| LLPS-Phv-1591 | Phaseolus vulgaris | 54.55 | 5e-19 | 84.7 |
| LLPS-Sob-1212 | Sorghum bicolor | 54.55 | 4e-20 | 88.2 |
| LLPS-Vir-2176 | Vigna radiata | 54.55 | 4e-19 | 85.1 |
| LLPS-Zem-1792 | Zea mays | 53.85 | 2e-19 | 85.9 |
| LLPS-Via-2129 | Vigna angularis | 53.25 | 1e-18 | 84.0 |
| LLPS-Hov-1478 | Hordeum vulgare | 49.35 | 4e-15 | 73.9 |
| LLPS-Ori-1841 | Oryza indica | 48.86 | 2e-17 | 78.6 |
| LLPS-Sei-2301 | Setaria italica | 46.15 | 3e-10 | 61.6 |