LLPS-Nia-1387
HMGYA_1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Hmg-y-related protein a |
| Gene Name: | HMGYA_1, A4A49_36262 |
| Ensembl Gene: | A4A49_36262 |
| Ensembl Protein: | OIT26301 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIT26301 | OIT26301 |
| UniProt | A0A1J6K8E9, A0A1J6K8E9_NICAT | |
| GeneBank | MJEQ01002881 | OIT26301.1 |
| RefSeq | XM_019379563.1 | XP_019235108.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MATEFVNKTQ THLEYPEMIY EALDALQQKE GSNKSSISKY IESKYGILND THSKLLTYHL 60 61 DRMKQTGELI FLKNNYIKPG PNVPPKRGRG RPPKPKTTLQ QDTEIAAPKP RGRPKKDPNE 120 121 PPTPKKLKPT IVPSNLANPV SKTGRPRGRP RKVKPQPAQN GVE 163 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCAACTG AATTTGTCAA CAAGACTCAA ACACATCTTG AATACCCTGA GATGATTTAT 60 61 GAAGCACTTG ATGCACTACA ACAAAAAGAA GGCTCAAACA AGTCATCAAT ATCAAAGTAC 120 121 ATTGAGTCCA AGTATGGAAT CTTGAATGAT ACACACTCAA AGTTGCTAAC TTACCATTTG 180 181 GATAGAATGA AACAAACTGG TGAACTTATT TTCCTCAAAA ACAATTATAT TAAGCCTGGT 240 241 CCAAATGTAC CTCCTAAGCG TGGCCGTGGA AGACCACCAA AGCCTAAAAC TACATTGCAA 300 301 CAAGATACAG AAATTGCAGC TCCAAAACCA AGAGGTAGAC CAAAGAAAGA TCCTAATGAA 360 361 CCACCTACTC CCAAGAAACT AAAACCAACA ATTGTCCCTA GTAACTTAGC TAATCCTGTT 420 421 TCTAAAACTG GAAGGCCTAG AGGTAGGCCT AGGAAAGTTA AGCCACAACC AGCACAAAAT 480 481 GGTGTTGAGT GA 492 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mua-1045 | Musa acuminata | 67.21 | 1e-09 | 57.8 |
| LLPS-Orp-1318 | Oryza punctata | 65.08 | 3e-11 | 62.4 |
| LLPS-Lep-0569 | Leersia perrieri | 65.08 | 1e-11 | 64.3 |
| LLPS-Orr-1848 | Oryza rufipogon | 63.93 | 3e-08 | 55.8 |
| LLPS-Viv-1661 | Vitis vinifera | 61.9 | 6e-09 | 55.8 |
| LLPS-Brd-1333 | Brachypodium distachyon | 61.04 | 3e-11 | 62.4 |
| LLPS-Sob-1212 | Sorghum bicolor | 59.74 | 4e-12 | 65.1 |
| LLPS-Orm-0762 | Oryza meridionalis | 59.38 | 5e-08 | 53.9 |
| LLPS-Ori-1841 | Oryza indica | 59.38 | 9e-08 | 51.6 |
| LLPS-Glm-0541 | Glycine max | 59.23 | 4e-10 | 59.3 |
| LLPS-Pot-1219 | Populus trichocarpa | 58.73 | 2e-11 | 63.2 |
| LLPS-Cus-2261 | Cucumis sativus | 57.81 | 2e-10 | 60.1 |
| LLPS-Vir-2176 | Vigna radiata | 57.14 | 5e-10 | 58.9 |
| LLPS-Met-1861 | Medicago truncatula | 57.14 | 8e-11 | 61.6 |
| LLPS-Ors-1823 | Oryza sativa | 56.58 | 1e-09 | 58.2 |
| LLPS-Orgl-1370 | Oryza glumaepatula | 56.58 | 5e-09 | 57.8 |
| LLPS-Orni-0110 | Oryza nivara | 56.58 | 1e-09 | 58.2 |
| LLPS-Phv-1591 | Phaseolus vulgaris | 56.3 | 3e-10 | 59.7 |
| LLPS-Via-2129 | Vigna angularis | 55.84 | 1e-09 | 58.2 |
| LLPS-Sol-0910 | Solanum lycopersicum | 55.56 | 9e-12 | 63.9 |
| LLPS-Zem-1792 | Zea mays | 55.13 | 2e-10 | 60.1 |
| LLPS-Prp-1544 | Prunus persica | 54.69 | 3e-08 | 54.3 |
| LLPS-Mae-1778 | Manihot esculenta | 54.69 | 2e-09 | 57.8 |
| LLPS-Sot-1993 | Solanum tuberosum | 53.85 | 1e-11 | 63.9 |
| LLPS-Arl-0313 | Arabidopsis lyrata | 52.54 | 7e-12 | 64.3 |
| LLPS-Art-1317 | Arabidopsis thaliana | 52.07 | 5e-11 | 62.0 |
| LLPS-Thc-1942 | Theobroma cacao | 51.52 | 1e-07 | 53.9 |
| LLPS-Gor-0961 | Gossypium raimondii | 50.77 | 4e-07 | 52.4 |
| LLPS-Dac-1491 | Daucus carota | 50.41 | 6e-11 | 61.6 |
| LLPS-Coc-2312 | Corchorus capsularis | 50.0 | 2e-10 | 60.1 |
| LLPS-Hea-2371 | Helianthus annuus | 49.04 | 1e-10 | 62.0 |
| LLPS-Bro-2062 | Brassica oleracea | 47.32 | 7e-08 | 53.5 |
| LLPS-Brn-0628 | Brassica napus | 46.96 | 2e-08 | 54.7 |
| LLPS-Hov-1478 | Hordeum vulgare | 44.09 | 8e-13 | 67.0 |
| LLPS-Tra-2081 | Triticum aestivum | 41.52 | 3e-14 | 70.9 |