DrLLPS - Data resource of LLPS

LLPS-Sob-0029
SORBI_3002G263800

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Proteasome subunit beta
Gene Name:	SORBI_3002G263800
Ensembl Gene:	SORBI_3002G263800
Ensembl Protein:	EER99181
Organism:	Sorghum bicolor
Taxa ID:	4558
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus, P-body, Others	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Caenorhabditis elegans	LLPS-Cae-0193	P90868	Regulator	P granule	36.32	1e-35	133
Arabidopsis thaliana	LLPS-Art-0013	Q7DLR9	Client	Nucleolus	74.78	1e-128	372
Saccharomyces cerevisiae	LLPS-Sac-0149	P30657	Client	P-body	41.87	1e-41	149

▼ FUNCTION

The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	EER99181	EER99181
UniProt		C5X5E3, C5X5E3_SORBI
GeneBank	CM000761	EER99181.1
RefSeq	XM_002462615.1	XP_002462660.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MDGLSKTIGG GGPSVPAGSH PAGGSQAAAG GGATQRTQYP YVTGTSVIAL KYKDGVIMAC 60 61 DTGASYGSTL RYKSVERIKA VGKHSIIGAS GEYSDFQEIL RYLDELTLSD HMWDDGNSLG 120 121 PKEIHSYLTR VMYNRRNKFD PLWNSLVLGG VKKGPKGDEK YLGMVNMIGT HFEENHVATG 180 181 FGNHLAIPIL RAEWREDMTF EEAVKLVEKC LLVLLYRDRS SINKFQIAKI TTEGSTIYPP 240 241 YSLKTYWGFT HFENPAQGAV GSW 263
Nucleotide CDS Sequence (FASTA)
1 ATGGACGGCC TCTCCAAGAC CATCGGCGGC GGTGGCCCTA GCGTTCCGGC GGGATCCCAC 60 61 CCCGCGGGCG GGAGCCAGGC GGCGGCCGGA GGAGGCGCGA CGCAGCGGAC GCAGTACCCG 120 121 TATGTGACTG GTACTTCAGT CATTGCCTTG AAATACAAGG ATGGTGTGAT TATGGCATGT 180 181 GACACTGGAG CCTCCTATGG ATCAACTTTG AGATACAAGA GTGTGGAACG CATTAAGGCA 240 241 GTTGGCAAGC ATAGCATCAT TGGAGCAAGT GGAGAGTACA GCGATTTCCA GGAGATCCTG 300 301 CGCTATCTGG ATGAACTAAC TCTGTCTGAT CATATGTGGG ATGATGGAAA CTCCCTGGGC 360 361 CCCAAAGAGA TCCACTCTTA TTTGACAAGA GTGATGTACA ACAGACGCAA CAAGTTTGAT 420 421 CCTCTCTGGA ACTCACTTGT ACTTGGTGGA GTGAAAAAGG GTCCAAAGGG AGATGAGAAG 480 481 TATCTTGGCA TGGTTAACAT GATTGGCACC CACTTTGAGG AAAACCATGT GGCTACTGGA 540 541 TTTGGAAATC ATCTGGCGAT CCCAATACTT CGTGCTGAAT GGCGCGAGGA TATGACTTTT 600 601 GAAGAAGCTG TTAAGCTGGT TGAGAAGTGC TTGCTGGTCT TGCTGTACCG TGACAGGTCA 660 661 TCTATCAACA AATTCCAGAT TGCCAAGATC ACAACTGAAG GATCAACCAT CTATCCACCA 720 721 TACTCCTTGA AGACTTACTG GGGCTTCACT CACTTTGAAA ACCCAGCCCA GGGCGCTGTG 780 781 GGATCATGGT AG 792

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0963	Cytoplasm
KW-0378	Hydrolase
KW-0539	Nucleus
KW-0645	Protease
KW-0647	Proteasome
KW-1185	Reference proteome
KW-0888	Threonine protease

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0022626	Cellular Component	Cytosolic ribosome
GO:0005634	Cellular Component	Nucleus
GO:0005839	Cellular Component	Proteasome core complex
GO:0004298	Molecular Function	Threonine-type endopeptidase activity
GO:0051603	Biological Process	Proteolysis involved in cellular protein catabolic process
GO:0046686	Biological Process	Response to cadmium ion
GO:0009651	Biological Process	Response to salt stress

▼ KEGG

sbi:8059004

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Zem-1086	Zea mays	97.72	3e-151	430
LLPS-Sei-1493	Setaria italica	96.52	2e-141	405
LLPS-Lep-0757	Leersia perrieri	96.09	3e-141	404
LLPS-Orbr-0785	Oryza brachyantha	95.65	4e-140	401
LLPS-Orp-0872	Oryza punctata	95.22	1e-140	403
LLPS-Orr-0729	Oryza rufipogon	93.91	3e-139	399
LLPS-Org-1645	Oryza glaberrima	93.91	3e-139	399
LLPS-Ors-0219	Oryza sativa	93.91	3e-139	399
LLPS-Orgl-0162	Oryza glumaepatula	93.91	8e-139	401
LLPS-Ori-0116	Oryza indica	93.91	9e-139	398
LLPS-Orb-0701	Oryza barthii	93.91	7e-139	401
LLPS-Orni-1345	Oryza nivara	93.91	4e-139	399
LLPS-Orm-0298	Oryza meridionalis	93.48	2e-136	401
LLPS-Brd-0575	Brachypodium distachyon	91.74	3e-136	391
LLPS-Tra-2307	Triticum aestivum	91.19	3e-132	380
LLPS-Tru-0946	Triticum urartu	90.87	1e-133	384
LLPS-Hov-1167	Hordeum vulgare	90.87	2e-133	386
LLPS-Amt-0025	Amborella trichopoda	81.74	2e-119	348
LLPS-Mua-0205	Musa acuminata	79.13	2e-117	343
LLPS-Via-0341	Vigna angularis	77.42	1e-86	264
LLPS-Hea-0075	Helianthus annuus	76.52	4e-113	333
LLPS-Coc-0673	Corchorus capsularis	76.09	6e-113	332
LLPS-Viv-1728	Vitis vinifera	76.09	4e-111	327
LLPS-Cus-0493	Cucumis sativus	75.98	5e-110	325
LLPS-Gor-2668	Gossypium raimondii	75.65	2e-114	336
LLPS-Pot-0203	Populus trichocarpa	75.55	7e-116	339
LLPS-Art-0013	Arabidopsis thaliana	74.78	3e-110	325
LLPS-Brr-1162	Brassica rapa	74.78	1e-110	326
LLPS-Brn-1356	Brassica napus	74.78	6e-111	327
LLPS-Prp-0539	Prunus persica	74.35	1e-112	331
LLPS-Bro-1711	Brassica oleracea	74.35	1e-109	323
LLPS-Mae-0049	Manihot esculenta	74.35	4e-113	332
LLPS-Arl-0166	Arabidopsis lyrata	74.35	1e-109	323
LLPS-Dac-1594	Daucus carota	74.35	8e-113	331
LLPS-Phv-1103	Phaseolus vulgaris	73.04	3e-111	327
LLPS-Met-0217	Medicago truncatula	73.04	1e-108	321
LLPS-Thc-1365	Theobroma cacao	73.04	1e-110	326
LLPS-Glm-2700	Glycine max	72.61	2e-111	328
LLPS-Nia-1490	Nicotiana attenuata	72.49	6e-106	314
LLPS-Sol-0648	Solanum lycopersicum	72.12	1e-101	310
LLPS-Sot-0000	Solanum tuberosum	71.62	2e-108	320
LLPS-Php-0902	Physcomitrella patens	67.39	2e-93	283
LLPS-Sem-1742	Selaginella moellendorffii	66.81	8e-96	289
LLPS-Vir-0007	Vigna radiata	61.74	3e-87	265
LLPS-Chr-1221	Chlamydomonas reinhardtii	54.35	6e-74	234
LLPS-Abg-0592	Absidia glauca	53.18	3e-55	185
LLPS-Osl-0755	Ostreococcus lucimarinus	52.61	2e-72	230
LLPS-Usm-0122	Ustilago maydis	48.86	1e-53	181
LLPS-Spr-0527	Sporisorium reilianum	48.2	4e-54	182
LLPS-Kop-0590	Komagataella pastoris	46.12	5e-44	155
LLPS-Put-0442	Puccinia triticina	45.25	2e-47	165
LLPS-Tum-1331	Tuber melanosporum	44.83	4e-41	148
LLPS-Chc-0508	Chondrus crispus	44.4	3e-58	194
LLPS-Bot-0552	Bos taurus	44.29	1e-48	168
LLPS-Gas-0004	Galdieria sulphuraria	44.14	1e-53	180
LLPS-Dar-2015	Danio rerio	44.09	2e-47	164
LLPS-Ova-1714	Ovis aries	43.84	4e-48	167
LLPS-Sus-0338	Sus scrofa	43.84	4e-48	166
LLPS-Mel-0424	Melampsora laricipopulina	43.75	1e-48	168
LLPS-Icp-2717	Ictalurus punctatus	43.75	8e-44	154
LLPS-Pof-0519	Poecilia formosa	43.44	6e-47	163
LLPS-Scp-0570	Schizosaccharomyces pombe	43.44	1e-47	165
LLPS-Xim-2686	Xiphophorus maculatus	43.44	1e-46	162
LLPS-Eqc-0629	Equus caballus	43.38	6e-47	165
LLPS-Cap-1014	Cavia porcellus	43.38	1e-47	165
LLPS-Poa-0357	Pongo abelii	43.38	1e-47	165
LLPS-Caf-0066	Canis familiaris	43.38	2e-47	165
LLPS-Mam-1167	Macaca mulatta	43.38	9e-48	166
LLPS-Cas-2343	Carlito syrichta	43.38	9e-48	166
LLPS-Ict-2515	Ictidomys tridecemlineatus	43.38	1e-47	165
LLPS-Nol-2641	Nomascus leucogenys	43.38	1e-47	165
LLPS-Fec-1657	Felis catus	43.38	1e-47	165
LLPS-Pat-0997	Pan troglodytes	43.38	1e-47	165
LLPS-Pap-1268	Pan paniscus	43.38	1e-47	165
LLPS-Urm-0488	Ursus maritimus	43.38	2e-47	165
LLPS-Hos-2928	Homo sapiens	43.38	1e-47	165
LLPS-Loa-0736	Loxodonta africana	43.38	8e-48	166
LLPS-Man-0218	Macaca nemestrina	43.38	9e-48	166
LLPS-Otg-2935	Otolemur garnettii	43.38	5e-47	164
LLPS-Rhb-1251	Rhinopithecus bieti	43.38	2e-47	165
LLPS-Ran-1484	Rattus norvegicus	43.38	1e-47	164
LLPS-Aim-1932	Ailuropoda melanoleuca	43.38	2e-47	165
LLPS-Mup-0807	Mustela putorius furo	43.38	1e-47	165
LLPS-Myl-0083	Myotis lucifugus	43.38	2e-47	165
LLPS-Paa-2176	Papio anubis	43.38	9e-48	166
LLPS-Mal-1983	Mandrillus leucophaeus	43.38	1e-47	165
LLPS-Chs-3326	Chlorocebus sabaeus	43.38	1e-47	165
LLPS-Mea-3004	Mesocricetus auratus	43.38	2e-47	164
LLPS-Maf-3155	Macaca fascicularis	43.38	9e-48	166
LLPS-Mum-3757	Mus musculus	43.38	2e-47	164
LLPS-Cea-0029	Cercocebus atys	43.38	1e-47	165
LLPS-Gog-2961	Gorilla gorilla	43.38	1e-47	165
LLPS-Caj-2414	Callithrix jacchus	43.38	8e-48	166
LLPS-Pug-1049	Puccinia graminis	43.3	9e-49	168
LLPS-Dio-1943	Dipodomys ordii	43.26	3e-46	161
LLPS-Gaa-0816	Gasterosteus aculeatus	43.26	3e-45	159
LLPS-Asm-0182	Astyanax mexicanus	43.26	6e-45	158
LLPS-Orl-1808	Oryzias latipes	42.99	1e-46	162
LLPS-Orc-0025	Oryctolagus cuniculus	42.92	4e-47	164
LLPS-Tag-1588	Taeniopygia guttata	42.73	6e-49	169
LLPS-Ten-0582	Tetraodon nigroviridis	42.53	3e-47	164
LLPS-Scm-2795	Scophthalmus maximus	42.53	7e-46	161
LLPS-Tar-0274	Takifugu rubripes	42.53	2e-46	162
LLPS-Scf-1611	Scleropages formosus	42.53	2e-44	157
LLPS-Sah-2748	Sarcophilus harrisii	42.47	6e-48	166
LLPS-Fud-0043	Fukomys damarensis	42.47	2e-46	162
LLPS-Yal-0666	Yarrowia lipolytica	42.36	6e-34	129
LLPS-Pes-0838	Pelodiscus sinensis	42.33	5e-47	162
LLPS-Asfu-1024	Aspergillus fumigatus	42.27	1e-43	154
LLPS-Nef-0845	Neosartorya fischeri	42.27	7e-44	155
LLPS-Phn-0876	Phaeosphaeria nodorum	42.08	3e-41	149
LLPS-Ast-1157	Aspergillus terreus	42.08	6e-39	142
LLPS-Orn-0147	Oreochromis niloticus	42.08	2e-46	162
LLPS-Asni-0147	Aspergillus niger	42.08	3e-41	148
LLPS-Aso-0205	Aspergillus oryzae	42.03	6e-41	147
LLPS-Asf-0483	Aspergillus flavus	42.03	6e-41	147
LLPS-Anc-0298	Anolis carolinensis	41.86	2e-47	163
LLPS-Asn-0496	Aspergillus nidulans	41.82	2e-40	146
LLPS-Ere-0545	Erinaceus europaeus	41.28	3e-26	105
LLPS-Asc-0437	Aspergillus clavatus	41.18	7e-42	150
LLPS-Nec-0539	Neurospora crassa	41.13	4e-40	145
LLPS-Miv-1107	Microbotryum violaceum	41.07	3e-47	165
LLPS-Pytr-1387	Pyrenophora triticirepentis	40.99	4e-42	150
LLPS-Pyt-0052	Pyrenophora teres	40.99	3e-42	151
LLPS-Scc-0321	Schizosaccharomyces cryophilus	40.91	2e-43	154
LLPS-Cii-0342	Ciona intestinalis	40.91	2e-44	157
LLPS-Crn-0027	Cryptococcus neoformans	40.89	4e-39	143
LLPS-Cym-0133	Cyanidioschyzon merolae	40.87	2e-43	153
LLPS-Ora-0290	Ornithorhynchus anatinus	40.85	1e-43	153
LLPS-Anp-1265	Anas platyrhynchos	40.82	9e-22	93.6
LLPS-Meg-1749	Meleagris gallopavo	40.47	4e-46	160
LLPS-Sac-0149	Saccharomyces cerevisiae	40.39	2e-34	130
LLPS-Scj-0530	Schizosaccharomyces japonicus	40.37	3e-43	154
LLPS-Blg-0413	Blumeria graminis	40.36	2e-40	146
LLPS-Gaga-3076	Gallus gallus	40.18	3e-46	161
LLPS-Lem-1475	Leptosphaeria maculans	40.09	8e-40	145
LLPS-Mod-0357	Monodelphis domestica	40.0	7e-45	157
LLPS-Trv-0311	Trichoderma virens	39.91	1e-37	139
LLPS-Trr-1212	Trichoderma reesei	39.46	2e-36	135
LLPS-Scs-0752	Sclerotinia sclerotiorum	39.46	1e-41	149
LLPS-Aon-1301	Aotus nancymaae	39.09	2e-31	122
LLPS-Fuo-0922	Fusarium oxysporum	38.84	5e-39	142
LLPS-Fuv-1059	Fusarium verticillioides	38.84	6e-39	142
LLPS-Dos-0716	Dothistroma septosporum	38.79	7e-36	134
LLPS-Zyt-0055	Zymoseptoria tritici	38.79	4e-36	135
LLPS-Lac-2397	Latimeria chalumnae	38.46	1e-42	152
LLPS-Fus-1074	Fusarium solani	38.39	7e-39	142
LLPS-Beb-0676	Beauveria bassiana	38.29	2e-34	130
LLPS-Mao-0042	Magnaporthe oryzae	37.55	2e-37	138
LLPS-Cog-0604	Colletotrichum gloeosporioides	37.17	8e-36	134
LLPS-Gag-1175	Gaeumannomyces graminis	36.59	3e-33	127
LLPS-Asg-1197	Ashbya gossypii	36.12	7e-35	132
LLPS-Cogr-1520	Colletotrichum graminicola	35.84	8e-33	126
LLPS-Coo-0168	Colletotrichum orbiculare	35.68	5e-33	127
LLPS-Cae-0193	Caenorhabditis elegans	35.38	3e-27	110
LLPS-Ved-0629	Verticillium dahliae	35.15	2e-34	131
LLPS-Fia-0961	Ficedula albicollis	33.8	1e-28	114
LLPS-Drm-1742	Drosophila melanogaster	31.88	2e-34	130

LLPS-Sob-0029SORBI_3002G263800

Protein Sequence

Nucleotide Sequence

LLPS-Sob-0029
SORBI_3002G263800