• Disorder
  • Domain
  • PTM
  • Variation
  • Mutation
  • Interaction
  • Disease
  • Drug
  • Physicochemical
  • Function
  • Proteomics
  • Structure
  • Localization
  • Expression
  • Element
  • Methylation

LLPS-Sei-0630
SETIT_5G082200v2

Integrated Annotations

▼ OVERVIEW


Status: Unreviewed
Protein Name: Eukaryotic translation initiation factor 3 subunit A
Gene Name: SETIT_5G082200v2
Ensembl Gene: SETIT_000211mg
Ensembl Protein: KQL04173
Organism: Setaria italica
Taxa ID: 4555
LLPS Type: LLPS regulator


▼ PROPERTY



——— Disorder propensity (calculated by IUPred2A)

▼ Classification


Condensates:
CondensateEvidenceOrthologs
Centrosome/Spindle pole body, P-body, Stress granule, OthersPredicted from orthologs(View)

▼ FUNCTION


RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

▼ CROSS REFERENCE


▼ SEQUENCE


Protein Sequence (FASTA)
1     MMKYVELCVD  LRKGRFAKDG  LIQYRIVCQQ  VNVSSLEDVI  KHFMQLSNER  AEQAKSQAEA  60
61    LEDALDVEDL  EADKRPEDLM  LSFVSGEKGK  DRSDKEVVTP  WFKFLWETYR  TVLEILRNNS  120
121   KLEALYAMTA  HRAFQFCKQY  KRTTEFRRLC  EIIRNHLANL  NKYRDQRDRP  DLTAPESLQL  180
181   YLDTRVEQLK  VATELSLWQE  AFRSVEDIHG  LMSMVKKMPK  PSVLVVYYAK  LTEIFWISDS  240
241   HLYHAYAWLK  LFNLQKSYNK  NLSQKDLQLI  ASSVLLAALS  VAPYDQKYGA  SHLETENEKE  300
301   RYMRMANLVN  FSLDSKRENR  ELPSRASLLS  ELVSKGVLSC  ASQEVRDLYN  LLEHEFLPLD  360
361   LASKVQPLLS  KISKIGGKLS  SASSVPEVKL  SQYISALEKL  TTLRVLQQAS  QIFQSMKIDM  420
421   LSRMIPFFDF  AVVEKISVDA  AKRNFVAIKV  NHLSGAVHFG  TVDIESDGLS  EHLSVLADSL  480
481   NKARNQICPP  VKKPSKLGES  LISLAGVVEN  EHRRLLARKS  IIEKRKEDLE  RQILEKEKEE  540
541   ESKRLSIQKK  SADEERNRLL  YEQKQREHER  IRREIEEKNK  AEARKLLEDL  TKKGGKKHVV  600
601   VEGELTKEAI  MELALNEQLK  ERQEMEKKLQ  KLAKTMDYLE  RAKRQEEAPL  IEQAFQKRLE  660
661   EEKILHEQEQ  LREIELSKQH  HAGDLQEKNR  LSRMLEHKNA  FQERIVQRRE  TEFGRLKKER  720
721   DERINQLISS  RKRERETVRK  LMYYLNLEEQ  RIERLREEEE  ARKREEEEKR  KREEAERKAK  780
781   LDAIAEKQRQ  RERELEEKEK  ARKEQLLRGS  EPARVAEAAP  VAQPPREPAA  APAAAAAAAA  840
841   AAAAAPAPGK  YVPKFKLRGS  DSSSSAGGSQ  RPADLRTRED  DRWGPREERP  RPDVRPVRQD  900
901   GPPARQDAPP  AARPDGPPST  ERWRGSRFPS  NSSSSSSTWG  RPRN  944
Nucleotide CDS Sequence (FASTA)
1     ATGATGAAGT  ATGTGGAGCT  CTGTGTTGAC  CTGAGGAAAG  GCAGATTTGC  GAAAGATGGC  60
61    CTTATTCAGT  ATAGAATTGT  CTGCCAGCAA  GTAAATGTGT  CTTCCTTGGA  AGATGTCATC  120
121   AAGCATTTTA  TGCAGCTTTC  CAATGAGAGA  GCCGAACAAG  CTAAGAGCCA  GGCAGAAGCC  180
181   CTGGAAGATG  CTTTGGATGT  TGAAGATCTG  GAAGCGGATA  AGCGTCCTGA  GGACCTAATG  240
241   CTCAGTTTTG  TTAGTGGGGA  GAAAGGAAAG  GACCGATCGG  ACAAAGAAGT  TGTTACTCCA  300
301   TGGTTTAAGT  TCCTCTGGGA  GACCTACAGG  ACAGTGCTTG  AGATACTAAG  GAATAATTCA  360
361   AAGCTTGAAG  CGTTGTATGC  TATGACTGCT  CATAGGGCTT  TTCAGTTTTG  TAAACAGTAT  420
421   AAGAGAACAA  CCGAATTCCG  TAGGTTGTGT  GAGATTATCA  GAAACCATCT  TGCCAATCTC  480
481   AACAAGTATC  GTGATCAAAG  AGATCGTCCT  GATCTGACTG  CCCCTGAAAG  TCTACAACTG  540
541   TATCTTGATA  CCCGGGTTGA  ACAACTTAAA  GTTGCAACAG  AGCTTTCCCT  ATGGCAGGAA  600
601   GCTTTCAGAT  CGGTGGAGGA  TATCCATGGT  CTGATGAGCA  TGGTGAAGAA  AATGCCAAAA  660
661   CCTTCTGTTT  TGGTTGTATA  TTATGCCAAG  TTAACTGAAA  TTTTCTGGAT  ATCTGATAGC  720
721   CACCTTTATC  ATGCATATGC  ATGGCTCAAG  CTTTTCAACT  TGCAAAAGAG  CTACAATAAG  780
781   AACTTGTCTC  AGAAGGATCT  ACAATTAATA  GCATCTTCTG  TCTTACTCGC  TGCACTATCT  840
841   GTGGCACCTT  ATGACCAGAA  GTATGGTGCA  TCTCATCTTG  AGACAGAAAA  TGAGAAGGAA  900
901   CGTTACATGC  GGATGGCGAA  CCTTGTCAAC  TTTTCGCTAG  ATTCCAAGCG  TGAAAATAGA  960
961   GAATTGCCTT  CAAGAGCATC  TCTTCTATCT  GAGTTGGTGT  CGAAAGGGGT  GCTTTCATGT  1020
1021  GCTTCCCAAG  AAGTGCGAGA  TTTGTACAAC  CTTTTGGAAC  ATGAGTTTCT  ACCTCTGGAC  1080
1081  CTTGCATCAA  AAGTGCAGCC  ACTTCTTTCG  AAGATTTCAA  AGATTGGAGG  GAAGCTTTCA  1140
1141  TCAGCTTCTT  CTGTTCCAGA  GGTTAAGCTT  TCTCAGTACA  TATCTGCATT  GGAGAAGCTT  1200
1201  ACAACACTGA  GAGTGCTGCA  GCAGGCCTCT  CAGATATTCC  AGTCCATGAA  AATTGATATG  1260
1261  CTCTCAAGAA  TGATCCCGTT  CTTTGACTTC  GCTGTTGTTG  AAAAGATTTC  TGTTGATGCT  1320
1321  GCGAAGCGCA  ATTTTGTTGC  TATAAAAGTG  AACCATTTAT  CAGGAGCCGT  TCATTTTGGT  1380
1381  ACTGTGGACA  TCGAATCTGA  TGGACTAAGT  GAACACCTCA  GTGTTTTGGC  TGATTCTTTA  1440
1441  AATAAAGCGA  GGAACCAAAT  TTGTCCACCA  GTTAAAAAGC  CATCTAAACT  TGGTGAAAGT  1500
1501  CTCATTAGTT  TAGCTGGAGT  AGTGGAGAAT  GAACACAGGA  GGCTTCTTGC  AAGAAAATCT  1560
1561  ATCATTGAGA  AGCGCAAAGA  AGACCTTGAG  CGCCAAATAT  TGGAGAAGGA  AAAAGAGGAG  1620
1621  GAATCAAAGA  GACTCAGTAT  TCAGAAGAAA  AGTGCGGATG  AGGAAAGGAA  TAGACTCCTC  1680
1681  TATGAACAAA  AGCAGAGGGA  GCATGAGCGG  ATTCGTAGAG  AAATAGAGGA  AAAAAATAAA  1740
1741  GCAGAAGCAA  GAAAGTTGCT  GGAGGACTTG  ACAAAGAAAG  GAGGCAAAAA  ACATGTTGTT  1800
1801  GTTGAAGGGG  AGCTTACCAA  GGAGGCCATC  ATGGAATTGG  CATTGAATGA  ACAGTTAAAG  1860
1861  GAGCGCCAAG  AAATGGAGAA  AAAACTGCAG  AAGCTTGCAA  AAACAATGGA  TTATCTGGAA  1920
1921  AGGGCAAAAA  GGCAGGAAGA  GGCTCCACTG  ATCGAACAAG  CTTTCCAAAA  ACGCCTTGAG  1980
1981  GAAGAGAAGA  TCCTTCACGA  GCAAGAGCAG  CTGCGGGAGA  TTGAACTCAG  CAAGCAACAC  2040
2041  CATGCAGGTG  ACTTGCAAGA  GAAAAATAGA  CTTTCTCGAA  TGTTGGAACA  CAAGAATGCT  2100
2101  TTCCAGGAAA  GAATCGTCCA  ACGCCGTGAG  ACTGAGTTTG  GTCGTCTGAA  GAAAGAGAGA  2160
2161  GATGAACGGA  TCAATCAATT  GATATCATCA  AGAAAGCGTG  AAAGAGAGAC  AGTAAGGAAA  2220
2221  TTGATGTATT  ATCTGAACCT  AGAGGAACAG  CGGATTGAAA  GGCTTCGTGA  GGAAGAGGAA  2280
2281  GCTAGAAAAC  GTGAAGAGGA  AGAGAAGAGG  AAGAGAGAAG  AGGCTGAGAG  GAAAGCTAAG  2340
2341  CTTGATGCTA  TTGCAGAGAA  GCAGCGACAG  AGAGAGAGAG  AATTGGAGGA  AAAGGAAAAG  2400
2401  GCGAGGAAGG  AACAGCTCTT  AAGAGGATCT  GAGCCTGCGC  GTGTTGCTGA  GGCTGCCCCT  2460
2461  GTTGCACAGC  CACCTCGTGA  GCCTGCAGCA  GCACCTGCTG  CTGCTGCAGC  TGCTGCTGCA  2520
2521  GCAGCTGCTG  CTGCTCCAGC  TCCTGGCAAA  TATGTTCCCA  AGTTTAAACT  TCGTGGCAGT  2580
2581  GATAGCAGCA  GCAGTGCTGG  TGGCAGTCAG  AGACCAGCAG  ATCTGCGTAC  ACGCGAAGAT  2640
2641  GACCGTTGGG  GACCACGTGA  AGAGCGCCCT  CGCCCTGATG  TCCGTCCAGT  CCGCCAAGAT  2700
2701  GGCCCTCCTG  CGCGACAGGA  TGCACCTCCA  GCAGCCCGCC  CAGATGGCCC  TCCGTCTACC  2760
2761  GAGCGCTGGC  GTGGATCAAG  ATTTCCCTCC  AACTCTTCGT  CCTCTTCATC  AACCTGGGGG  2820
2821  AGGCCACGGA  ACTGA  2835

▼ KEYWORD


ID
Family
Coiled coil
Complete proteome
Cytoplasm
Initiation factor
Protein biosynthesis
Reference proteome
RNA-binding

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Eukaryotic 43S preinitiation complex
Cellular Component
Eukaryotic 48S preinitiation complex
Cellular Component
Eukaryotic translation initiation factor 3 complex
Molecular Function
Translation initiation factor activity
Biological Process
Formation of cytoplasmic translation initiation complex

▼ KEGG



▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Sob-1639Sorghum bicolor95.310.01224
LLPS-Zem-1185Zea mays91.820.01174
LLPS-Orni-0562Oryza nivara86.650.01132
LLPS-Ori-1613Oryza indica86.650.01132
LLPS-Orm-0829Oryza meridionalis86.650.01131
LLPS-Orgl-0581Oryza glumaepatula86.520.01134
LLPS-Ors-0761Oryza sativa86.520.01130
LLPS-Orp-0081Oryza punctata86.520.01122
LLPS-Orr-0489Oryza rufipogon86.520.01132
LLPS-Orb-0329Oryza barthii86.380.01125
LLPS-Org-0875Oryza glaberrima86.380.01123
LLPS-Lep-1793Leersia perrieri86.350.01121
LLPS-Brd-1665Brachypodium distachyon86.190.01144
LLPS-Hov-0369Hordeum vulgare85.810.01127
LLPS-Tra-0743Triticum aestivum85.680.01128
LLPS-Orbr-1098Oryza brachyantha85.680.01129
LLPS-Tru-0894Triticum urartu85.680.01129
LLPS-Pot-0396Populus trichocarpa79.960.0 788
LLPS-Met-0081Medicago truncatula76.890.0 773
LLPS-Mua-1669Musa acuminata74.970.0 967
LLPS-Coc-1440Corchorus capsularis74.370.0 931
LLPS-Mae-0510Manihot esculenta73.970.0 974
LLPS-Viv-0885Vitis vinifera73.260.0 958
LLPS-Cus-1019Cucumis sativus73.070.0 953
LLPS-Thc-0247Theobroma cacao72.860.0 952
LLPS-Prp-1021Prunus persica72.520.0 923
LLPS-Nia-0434Nicotiana attenuata72.420.0 969
LLPS-Glm-1144Glycine max72.060.0 925
LLPS-Vir-0284Vigna radiata71.930.0 931
LLPS-Sol-0993Solanum lycopersicum71.620.0 936
LLPS-Sot-0022Solanum tuberosum71.620.0 936
LLPS-Gor-0600Gossypium raimondii71.520.0 946
LLPS-Phv-0370Phaseolus vulgaris71.390.0 923
LLPS-Bro-0581Brassica oleracea70.490.0 927
LLPS-Amt-0137Amborella trichopoda70.450.0 898
LLPS-Brn-0379Brassica napus70.360.0 926
LLPS-Brr-1395Brassica rapa70.360.0 924
LLPS-Arl-0341Arabidopsis lyrata69.690.0 920
LLPS-Art-2707Arabidopsis thaliana69.390.0 910
LLPS-Dac-0439Daucus carota69.290.0 919
LLPS-Hea-1664Helianthus annuus69.080.0 895
LLPS-Via-0841Vigna angularis68.450.0 850
LLPS-Sem-0179Selaginella moellendorffii64.780.0 808
LLPS-Php-0612Physcomitrella patens63.870.0 813
LLPS-Ict-0861Ictidomys tridecemlineatus60.878e-1170.5
LLPS-Chr-0851Chlamydomonas reinhardtii46.138e-136 440
LLPS-Osl-0946Ostreococcus lucimarinus42.136e-156 488
LLPS-Asn-0846Aspergillus nidulans40.325e-97 335
LLPS-Abg-0914Absidia glauca37.619e-105 355
LLPS-Spr-0531Sporisorium reilianum37.352e-102 350
LLPS-Tum-1297Tuber melanosporum37.313e-98 339
LLPS-Usm-0700Ustilago maydis36.931e-103 353
LLPS-Xet-1944Xenopus tropicalis36.813e-96 337
LLPS-Anc-0781Anolis carolinensis36.732e-95 334
LLPS-Leo-0013Lepisosteus oculatus36.683e-96 335
LLPS-Pug-0601Puccinia graminis36.489e-78 280
LLPS-Yal-0777Yarrowia lipolytica36.462e-86 303
LLPS-Put-0093Puccinia triticina36.426e-80 287
LLPS-Crn-0205Cryptococcus neoformans36.288e-0757.4
LLPS-Nol-2298Nomascus leucogenys36.231e-98 343
LLPS-Mea-1773Mesocricetus auratus36.047e-109 370
LLPS-Tar-3448Takifugu rubripes35.992e-104 359
LLPS-Ora-0586Ornithorhynchus anatinus35.918e-106 363
LLPS-Mum-0015Mus musculus35.911e-106 366
LLPS-Mod-0435Monodelphis domestica35.911e-107 365
LLPS-Orl-1930Oryzias latipes35.727e-103 355
LLPS-Pof-1144Poecilia formosa35.712e-106 365
LLPS-Cas-1796Carlito syrichta35.77e-103 355
LLPS-Mel-0352Melampsora laricipopulina35.614e-75 272
LLPS-Fia-0193Ficedula albicollis35.63e-105 360
LLPS-Scm-1761Scophthalmus maximus35.512e-108 370
LLPS-Scf-0964Scleropages formosus35.55e-107 366
LLPS-Orn-0451Oreochromis niloticus35.485e-104 358
LLPS-Tag-0426Taeniopygia guttata35.481e-103 357
LLPS-Xim-0895Xiphophorus maculatus35.424e-106 363
LLPS-Asm-2057Astyanax mexicanus35.293e-104 359
LLPS-Cae-0073Caenorhabditis elegans35.228e-84 298
LLPS-Beb-1221Beauveria bassiana35.156e-88 309
LLPS-Dar-0159Danio rerio35.044e-104 358
LLPS-Cii-0363Ciona intestinalis34.797e-90 315
LLPS-Mal-2977Mandrillus leucophaeus34.792e-92 325
LLPS-Fud-0634Fukomys damarensis34.776e-104 358
LLPS-Ast-0339Aspergillus terreus34.733e-106 360
LLPS-Chs-2477Chlorocebus sabaeus34.646e-105 360
LLPS-Gog-0965Gorilla gorilla34.519e-105 358
LLPS-Sus-0395Sus scrofa34.512e-103 357
LLPS-Myl-2518Myotis lucifugus34.513e-102 354
LLPS-Paa-0066Papio anubis34.512e-102 355
LLPS-Rhb-2196Rhinopithecus bieti34.519e-104 358
LLPS-Hos-1018Homo sapiens34.512e-102 354
LLPS-Loa-0625Loxodonta africana34.512e-103 357
LLPS-Poa-3313Pongo abelii34.512e-102 355
LLPS-Mam-0588Macaca mulatta34.511e-102 355
LLPS-Asc-0268Aspergillus clavatus34.481e-107 364
LLPS-Ran-0623Rattus norvegicus34.474e-107 368
LLPS-Asfu-0717Aspergillus fumigatus34.458e-105 357
LLPS-Cap-0952Cavia porcellus34.426e-103 356
LLPS-Pyt-0036Pyrenophora teres34.414e-102 350
LLPS-Pytr-0849Pyrenophora triticirepentis34.413e-102 350
LLPS-Caj-2102Callithrix jacchus34.384e-102 353
LLPS-Cea-0090Cercocebus atys34.383e-103 357
LLPS-Ova-0256Ovis aries34.382e-103 357
LLPS-Bot-2842Bos taurus34.381e-103 358
LLPS-Dio-0869Dipodomys ordii34.381e-103 357
LLPS-Otg-1062Otolemur garnettii34.389e-103 355
LLPS-Orc-2967Oryctolagus cuniculus34.382e-103 357
LLPS-Pap-0435Pan paniscus34.381e-103 358
LLPS-Eqc-1710Equus caballus34.382e-103 357
LLPS-Fuv-0009Fusarium verticillioides34.362e-87 308
LLPS-Aso-0629Aspergillus oryzae34.361e-105 358
LLPS-Sah-1478Sarcophilus harrisii34.351e-104 360
LLPS-Nef-1170Neosartorya fischeri34.324e-105 357
LLPS-Asni-0491Aspergillus niger34.261e-105 358
LLPS-Aon-2312Aotus nancymaae34.253e-103 357
LLPS-Aim-0186Ailuropoda melanoleuca34.255e-103 356
LLPS-Pes-0891Pelodiscus sinensis34.251e-104 359
LLPS-Fec-0067Felis catus34.253e-103 357
LLPS-Caf-1416Canis familiaris34.253e-103 357
LLPS-Fuo-0554Fusarium oxysporum34.192e-87 308
LLPS-Chc-0832Chondrus crispus34.089e-77 276
LLPS-Meg-1968Meleagris gallopavo34.058e-104 358
LLPS-Gaga-1420Gallus gallus34.053e-103 357
LLPS-Scj-0577Schizosaccharomyces japonicus33.851e-106 359
LLPS-Lem-0000Leptosphaeria maculans33.852e-108 367
LLPS-Mup-2552Mustela putorius furo33.772e-98 343
LLPS-Coo-1154Colletotrichum orbiculare33.632e-104 356
LLPS-Zyt-0164Zymoseptoria tritici33.51e-104 357
LLPS-Cog-0227Colletotrichum gloeosporioides33.57e-105 356
LLPS-Dos-0694Dothistroma septosporum33.386e-105 358
LLPS-Kop-0603Komagataella pastoris33.331e-66 244
LLPS-Scp-0823Schizosaccharomyces pombe33.334e-101 344
LLPS-Gaa-2181Gasterosteus aculeatus33.332e-104 358
LLPS-Miv-0040Microbotryum violaceum33.334e-91 318
LLPS-Man-0022Macaca nemestrina33.335e-93 327
LLPS-Blg-0618Blumeria graminis33.298e-100 342
LLPS-Maf-0125Macaca fascicularis33.27e-93 327
LLPS-Ved-0012Verticillium dahliae33.123e-100 344
LLPS-Cogr-0497Colletotrichum graminicola33.044e-102 350
LLPS-Drm-0296Drosophila melanogaster33.029e-90 316
LLPS-Trr-0690Trichoderma reesei33.01e-99 342
LLPS-Lac-0085Latimeria chalumnae32.951e-99 346
LLPS-Gas-0051Galdieria sulphuraria32.854e-76 273
LLPS-Scc-0341Schizosaccharomyces cryophilus32.83e-103 350
LLPS-Nec-1029Neurospora crassa32.781e-102 351
LLPS-Scs-0678Sclerotinia sclerotiorum32.754e-101 346
LLPS-Trv-0529Trichoderma virens32.759e-98 338
LLPS-Fus-1159Fusarium solani32.666e-100 343
LLPS-Map-0507Magnaporthe poae32.452e-101 348
LLPS-Gag-0109Gaeumannomyces graminis32.452e-102 351
LLPS-Mao-1429Magnaporthe oryzae32.412e-97 337
LLPS-Asf-0691Aspergillus flavus32.233e-88 310
LLPS-Ten-1186Tetraodon nigroviridis32.212e-51 201
LLPS-Asg-0027Ashbya gossypii31.742e-59 223
LLPS-Phn-1167Phaeosphaeria nodorum30.452e-72 264
LLPS-Sac-0156Saccharomyces cerevisiae29.674e-52 202
LLPS-Pat-0419Pan troglodytes27.425e-36 152
LLPS-Cym-0030Cyanidioschyzon merolae23.431e-26 122