LLPS-Scp-1511
SPCC306.07c
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Putative ribosome biogenesis protein C306.07c; U3 snoRNP-associated protein C306.07c |
| Gene Name: | SPCC306.07c |
| Ensembl Gene: | SPCC306.07c |
| Ensembl Protein: | SPCC306.07c.1 |
| Organism: | Schizosaccharomyces pombe |
| Taxa ID: | 284812 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Involved in rRNA-processing and ribosome biosynthesis. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | SPCC306.07c.1 | SPCC306.07c.1 |
| UniProt | Q9Y7R7, RL1DA_SCHPO | |
| GeneBank | CU329672 | CAB41655.1 |
| RefSeq | NM_001022808.2 | NP_587815.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAITSEKKKN LKSLDKIDIK LLEKTIRALL QHIRSSDKPI EKEKVYIQVN TFQPVEKESL 60 61 RRPSKVFLPH RIMHVTDACL IVKDSQQTYQ DLVEQQGLDE VITKVLSIPR LKLKYKTIRE 120 121 KCELRDSHNL FLVDDRVLKY IPLLMGKVFE QKKIKPFPIS VLQKKETLRN QVARCLHSTY 180 181 LKLSAGTSHT ILCGLATQTN EQLLENITTV LKCLLTNFIP KGWSAIDNVA IKTADSASLP 240 241 IWTSDTNLAA HKRHIVHIQD ARPLKKSELR AQKRGSSGEG KGNK 284 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGATTA CAAGTGAAAA AAAGAAAAAT TTAAAGTCAT TGGATAAAAT TGACATAAAA 60 61 TTACTAGAGA AAACAATTAG AGCCCTGCTG CAGCACATTC GATCCTCTGA TAAACCTATT 120 121 GAAAAAGAAA AGGTTTATAT TCAGGTTAAT ACATTCCAAC CCGTTGAGAA AGAGTCGCTT 180 181 AGAAGACCAT CAAAAGTATT CCTTCCGCAC AGGATAATGC ATGTAACAGA TGCTTGTTTG 240 241 ATTGTGAAAG ATTCACAGCA GACATATCAA GATCTGGTGG AGCAACAAGG GCTTGACGAA 300 301 GTCATTACAA AAGTACTTAG CATCCCGAGA TTGAAATTAA AGTATAAAAC AATCCGAGAA 360 361 AAATGTGAGC TACGAGACTC TCACAACCTT TTTTTGGTTG ATGATCGTGT ATTAAAATAC 420 421 ATCCCCCTAT TGATGGGGAA AGTTTTTGAA CAGAAAAAAA TTAAGCCATT TCCTATTTCT 480 481 GTTTTACAAA AGAAAGAGAC TTTGCGTAAT CAAGTTGCTC GTTGTCTTCA TTCTACTTAT 540 541 CTTAAGTTAT CTGCCGGCAC TAGTCATACC ATTCTCTGTG GTTTGGCCAC TCAAACCAAT 600 601 GAACAATTGT TGGAGAATAT TACGACTGTA TTGAAGTGTC TGCTAACTAA TTTCATTCCG 660 661 AAAGGGTGGT CTGCAATTGA TAATGTTGCG ATTAAAACAG CTGACAGTGC CTCTCTGCCA 720 721 ATTTGGACTA GTGACACCAA TCTTGCTGCT CATAAAAGAC ACATTGTGCA CATTCAAGAT 780 781 GCAAGACCTC TTAAGAAAAG TGAACTGCGT GCTCAAAAAC GGGGTTCTTC TGGAGAAGGC 840 841 AAAGGGAATA AGTGA 855 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | 90S preribosome | |
Cellular Component | Nucleolus | |
Cellular Component | Nucleus | |
Molecular Function | RNA binding | |
Biological Process | Maturation of LSU-rRNA | |
Biological Process | Ribosomal large subunit biogenesis |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Scc-0103 | Schizosaccharomyces cryophilus | 64.66 | 3e-118 | 348 |
| LLPS-Scj-0733 | Schizosaccharomyces japonicus | 50.99 | 7e-92 | 280 |
| LLPS-Tum-0517 | Tuber melanosporum | 36.41 | 1e-31 | 125 |
| LLPS-Zyt-0258 | Zymoseptoria tritici | 35.34 | 2e-14 | 73.9 |
| LLPS-Xet-0165 | Xenopus tropicalis | 33.67 | 1e-16 | 83.6 |
| LLPS-Osl-0375 | Ostreococcus lucimarinus | 33.47 | 1e-20 | 93.6 |
| LLPS-Spr-0714 | Sporisorium reilianum | 33.33 | 7e-29 | 117 |
| LLPS-Php-1046 | Physcomitrella patens | 33.16 | 5e-25 | 106 |
| LLPS-Gas-0271 | Galdieria sulphuraria | 32.7 | 6e-22 | 96.7 |
| LLPS-Crn-0392 | Cryptococcus neoformans | 32.61 | 6e-26 | 109 |
| LLPS-Leo-0319 | Lepisosteus oculatus | 32.52 | 1e-15 | 80.1 |
| LLPS-Mup-3829 | Mustela putorius furo | 32.11 | 1e-20 | 95.1 |
| LLPS-Urm-0317 | Ursus maritimus | 32.09 | 3e-20 | 94.0 |
| LLPS-Chr-1019 | Chlamydomonas reinhardtii | 31.98 | 1e-15 | 78.6 |
| LLPS-Pug-0866 | Puccinia graminis | 31.89 | 1e-26 | 111 |
| LLPS-Chc-0706 | Chondrus crispus | 31.85 | 2e-13 | 73.6 |
| LLPS-Dio-1980 | Dipodomys ordii | 31.82 | 2e-11 | 67.8 |
| LLPS-Fud-2232 | Fukomys damarensis | 31.75 | 3e-19 | 90.9 |
| LLPS-Mel-0140 | Melampsora laricipopulina | 31.47 | 2e-25 | 106 |
| LLPS-Lem-0103 | Leptosphaeria maculans | 31.44 | 1e-26 | 112 |
| LLPS-Nol-0031 | Nomascus leucogenys | 31.2 | 2e-20 | 94.7 |
| LLPS-Mum-2277 | Mus musculus | 31.12 | 6e-21 | 95.9 |
| LLPS-Miv-0023 | Microbotryum violaceum | 31.09 | 2e-20 | 93.2 |
| LLPS-Gaga-2101 | Gallus gallus | 31.05 | 2e-15 | 79.7 |
| LLPS-Mod-3830 | Monodelphis domestica | 30.97 | 2e-15 | 79.7 |
| LLPS-Put-0841 | Puccinia triticina | 30.88 | 2e-19 | 90.1 |
| LLPS-Tag-1481 | Taeniopygia guttata | 30.8 | 1e-17 | 83.6 |
| LLPS-Paa-1874 | Papio anubis | 30.77 | 7e-20 | 93.2 |
| LLPS-Mal-0534 | Mandrillus leucophaeus | 30.77 | 5e-20 | 93.6 |
| LLPS-Cea-0036 | Cercocebus atys | 30.77 | 1e-19 | 92.8 |
| LLPS-Maf-2127 | Macaca fascicularis | 30.77 | 7e-20 | 93.2 |
| LLPS-Mam-1434 | Macaca mulatta | 30.77 | 6e-20 | 93.6 |
| LLPS-Pat-2923 | Pan troglodytes | 30.77 | 4e-20 | 94.0 |
| LLPS-Caf-1318 | Canis familiaris | 30.64 | 5e-20 | 93.6 |
| LLPS-Pes-2113 | Pelodiscus sinensis | 30.64 | 2e-17 | 85.9 |
| LLPS-Fec-1574 | Felis catus | 30.53 | 9e-19 | 89.7 |
| LLPS-Chs-0316 | Chlorocebus sabaeus | 30.34 | 1e-19 | 92.4 |
| LLPS-Gog-0255 | Gorilla gorilla | 30.34 | 8e-20 | 93.2 |
| LLPS-Man-2269 | Macaca nemestrina | 30.34 | 1e-19 | 92.4 |
| LLPS-Hos-0012 | Homo sapiens | 30.34 | 7e-20 | 93.2 |
| LLPS-Pap-2506 | Pan paniscus | 30.34 | 7e-20 | 93.2 |
| LLPS-Rhb-3654 | Rhinopithecus bieti | 30.34 | 2e-19 | 92.0 |
| LLPS-Aim-2720 | Ailuropoda melanoleuca | 30.21 | 9e-20 | 92.8 |
| LLPS-Ran-1172 | Rattus norvegicus | 30.2 | 1e-18 | 89.4 |
| LLPS-Ict-1771 | Ictidomys tridecemlineatus | 30.16 | 9e-19 | 89.4 |
| LLPS-Caj-0272 | Callithrix jacchus | 30.04 | 3e-19 | 91.3 |
| LLPS-Bot-0117 | Bos taurus | 29.91 | 2e-17 | 85.9 |
| LLPS-Ova-2993 | Ovis aries | 29.91 | 2e-17 | 86.3 |
| LLPS-Eqc-0621 | Equus caballus | 29.91 | 2e-17 | 85.9 |
| LLPS-Kop-0244 | Komagataella pastoris | 29.85 | 6e-12 | 69.3 |
| LLPS-Sol-2398 | Solanum lycopersicum | 29.77 | 6e-22 | 97.1 |
| LLPS-Aon-4377 | Aotus nancymaae | 29.74 | 4e-17 | 84.7 |
| LLPS-Fia-2392 | Ficedula albicollis | 29.68 | 5e-16 | 81.6 |
| LLPS-Brn-1843 | Brassica napus | 29.67 | 2e-18 | 88.2 |
| LLPS-Bro-2391 | Brassica oleracea | 29.67 | 2e-18 | 88.2 |
| LLPS-Amt-0950 | Amborella trichopoda | 29.54 | 3e-20 | 94.7 |
| LLPS-Anp-0085 | Anas platyrhynchos | 29.47 | 5e-14 | 75.5 |
| LLPS-Asm-1622 | Astyanax mexicanus | 29.41 | 1e-11 | 68.6 |
| LLPS-Mua-1399 | Musa acuminata | 29.26 | 2e-21 | 97.1 |
| LLPS-Scf-1015 | Scleropages formosus | 29.21 | 1e-14 | 77.0 |
| LLPS-Orn-0672 | Oreochromis niloticus | 29.21 | 5e-13 | 72.0 |
| LLPS-Trv-0798 | Trichoderma virens | 29.17 | 4e-26 | 110 |
| LLPS-Sot-1629 | Solanum tuberosum | 29.15 | 1e-21 | 95.9 |
| LLPS-Nia-0976 | Nicotiana attenuata | 29.14 | 6e-19 | 89.7 |
| LLPS-Cap-0050 | Cavia porcellus | 29.1 | 1e-17 | 86.7 |
| LLPS-Myl-1101 | Myotis lucifugus | 29.06 | 5e-16 | 81.6 |
| LLPS-Otg-0784 | Otolemur garnettii | 29.06 | 1e-15 | 80.5 |
| LLPS-Usm-1152 | Ustilago maydis | 28.91 | 3e-24 | 104 |
| LLPS-Orl-1091 | Oryzias latipes | 28.9 | 4e-15 | 78.2 |
| LLPS-Cii-0440 | Ciona intestinalis | 28.87 | 1e-15 | 77.8 |
| LLPS-Icp-0457 | Ictalurus punctatus | 28.82 | 3e-14 | 75.9 |
| LLPS-Tar-2108 | Takifugu rubripes | 28.8 | 7e-14 | 74.7 |
| LLPS-Asn-1039 | Aspergillus nidulans | 28.77 | 1e-25 | 108 |
| LLPS-Cus-0991 | Cucumis sativus | 28.76 | 2e-19 | 90.5 |
| LLPS-Sem-1599 | Selaginella moellendorffii | 28.76 | 3e-21 | 94.4 |
| LLPS-Abg-0618 | Absidia glauca | 28.7 | 3e-21 | 94.4 |
| LLPS-Cas-0000 | Carlito syrichta | 28.68 | 4e-18 | 88.2 |
| LLPS-Sus-0859 | Sus scrofa | 28.42 | 4e-16 | 82.0 |
| LLPS-Tra-2383 | Triticum aestivum | 28.37 | 4e-12 | 70.1 |
| LLPS-Orc-0756 | Oryctolagus cuniculus | 28.34 | 2e-15 | 79.7 |
| LLPS-Lep-0379 | Leersia perrieri | 28.29 | 2e-09 | 61.6 |
| LLPS-Phn-0646 | Phaeosphaeria nodorum | 28.15 | 1e-26 | 111 |
| LLPS-Poa-0765 | Pongo abelii | 28.14 | 4e-09 | 60.8 |
| LLPS-Art-0684 | Arabidopsis thaliana | 28.11 | 2e-16 | 82.4 |
| LLPS-Cym-0327 | Cyanidioschyzon merolae | 28.0 | 2e-11 | 67.8 |
| LLPS-Brr-0702 | Brassica rapa | 27.91 | 2e-18 | 89.0 |
| LLPS-Xim-0335 | Xiphophorus maculatus | 27.72 | 2e-11 | 67.8 |
| LLPS-Pof-0166 | Poecilia formosa | 27.72 | 9e-12 | 68.6 |
| LLPS-Aso-0579 | Aspergillus oryzae | 27.66 | 1e-25 | 108 |
| LLPS-Asf-0246 | Aspergillus flavus | 27.66 | 1e-25 | 108 |
| LLPS-Orbr-0404 | Oryza brachyantha | 27.66 | 6e-09 | 60.5 |
| LLPS-Blg-0564 | Blumeria graminis | 27.59 | 7e-25 | 105 |
| LLPS-Trr-0396 | Trichoderma reesei | 27.56 | 6e-25 | 106 |
| LLPS-Gaa-0085 | Gasterosteus aculeatus | 27.52 | 6e-13 | 72.0 |
| LLPS-Ten-2742 | Tetraodon nigroviridis | 27.48 | 6e-14 | 74.7 |
| LLPS-Hea-1780 | Helianthus annuus | 27.45 | 2e-15 | 78.2 |
| LLPS-Dos-0805 | Dothistroma septosporum | 27.44 | 5e-28 | 115 |
| LLPS-Dac-2108 | Daucus carota | 27.36 | 9e-17 | 84.0 |
| LLPS-Pyt-0491 | Pyrenophora teres | 27.31 | 1e-23 | 102 |
| LLPS-Coo-0939 | Colletotrichum orbiculare | 27.31 | 8e-27 | 112 |
| LLPS-Viv-0770 | Vitis vinifera | 27.23 | 1e-14 | 77.4 |
| LLPS-Coc-1750 | Corchorus capsularis | 27.1 | 9e-20 | 91.3 |
| LLPS-Dar-0696 | Danio rerio | 27.05 | 3e-10 | 63.9 |
| LLPS-Scm-0441 | Scophthalmus maximus | 27.02 | 6e-13 | 72.0 |
| LLPS-Loa-1817 | Loxodonta africana | 26.81 | 2e-14 | 76.6 |
| LLPS-Ora-0606 | Ornithorhynchus anatinus | 26.69 | 2e-14 | 76.6 |
| LLPS-Vir-0577 | Vigna radiata | 26.61 | 2e-16 | 82.4 |
| LLPS-Zem-0183 | Zea mays | 26.6 | 1e-12 | 70.9 |
| LLPS-Cis-0391 | Ciona savignyi | 26.58 | 4e-12 | 69.3 |
| LLPS-Prp-0137 | Prunus persica | 26.46 | 1e-13 | 74.7 |
| LLPS-Pytr-0207 | Pyrenophora triticirepentis | 26.43 | 4e-23 | 101 |
| LLPS-Ved-1274 | Verticillium dahliae | 26.42 | 7e-25 | 106 |
| LLPS-Sob-1153 | Sorghum bicolor | 26.42 | 4e-12 | 69.7 |
| LLPS-Mao-0287 | Magnaporthe oryzae | 26.38 | 4e-20 | 93.2 |
| LLPS-Nec-1430 | Neurospora crassa | 26.36 | 1e-21 | 97.1 |
| LLPS-Orgl-1312 | Oryza glumaepatula | 26.18 | 1e-14 | 77.0 |
| LLPS-Orni-1477 | Oryza nivara | 26.18 | 1e-14 | 77.0 |
| LLPS-Org-0292 | Oryza glaberrima | 26.18 | 1e-14 | 77.0 |
| LLPS-Ors-0545 | Oryza sativa | 26.18 | 1e-14 | 77.0 |
| LLPS-Thc-0647 | Theobroma cacao | 26.16 | 4e-13 | 72.8 |
| LLPS-Nef-0528 | Neosartorya fischeri | 26.16 | 8e-24 | 103 |
| LLPS-Pot-2819 | Populus trichocarpa | 26.12 | 6e-11 | 66.2 |
| LLPS-Hov-1032 | Hordeum vulgare | 26.06 | 2e-13 | 73.9 |
| LLPS-Mae-0204 | Manihot esculenta | 26.06 | 5e-16 | 81.3 |
| LLPS-Orb-0928 | Oryza barthii | 26.02 | 2e-14 | 76.6 |
| LLPS-Ori-0142 | Oryza indica | 26.02 | 4e-14 | 76.6 |
| LLPS-Orr-0977 | Oryza rufipogon | 26.02 | 1e-14 | 77.0 |
| LLPS-Phv-0269 | Phaseolus vulgaris | 25.96 | 4e-16 | 81.6 |
| LLPS-Sei-0686 | Setaria italica | 25.93 | 3e-13 | 73.9 |
| LLPS-Orp-0701 | Oryza punctata | 25.91 | 8e-14 | 74.7 |
| LLPS-Cog-0859 | Colletotrichum gloeosporioides | 25.86 | 4e-24 | 104 |
| LLPS-Asc-1197 | Aspergillus clavatus | 25.64 | 2e-22 | 99.8 |
| LLPS-Beb-0512 | Beauveria bassiana | 25.64 | 3e-22 | 99.4 |
| LLPS-Ast-0560 | Aspergillus terreus | 25.63 | 3e-22 | 99.0 |
| LLPS-Orm-1449 | Oryza meridionalis | 25.51 | 1e-13 | 74.7 |
| LLPS-Gag-0893 | Gaeumannomyces graminis | 25.49 | 1e-20 | 94.7 |
| LLPS-Arl-0471 | Arabidopsis lyrata | 25.45 | 5e-16 | 81.3 |
| LLPS-Fuo-1151 | Fusarium oxysporum | 25.44 | 8e-24 | 103 |
| LLPS-Asfu-0117 | Aspergillus fumigatus | 25.32 | 6e-23 | 100 |
| LLPS-Gor-0494 | Gossypium raimondii | 25.23 | 3e-15 | 78.6 |
| LLPS-Glm-0178 | Glycine max | 25.21 | 3e-16 | 82.0 |
| LLPS-Fuv-1055 | Fusarium verticillioides | 24.71 | 7e-22 | 97.8 |
| LLPS-Cogr-1502 | Colletotrichum graminicola | 24.22 | 3e-23 | 102 |
| LLPS-Brd-0552 | Brachypodium distachyon | 24.21 | 2e-13 | 73.9 |
| LLPS-Asni-0300 | Aspergillus niger | 23.55 | 3e-19 | 90.5 |
| LLPS-Fus-1045 | Fusarium solani | 23.4 | 2e-21 | 96.7 |
| LLPS-Met-1780 | Medicago truncatula | 22.75 | 1e-14 | 77.0 |
| LLPS-Yal-0408 | Yarrowia lipolytica | 22.75 | 5e-12 | 69.7 |