LLPS-Dar-0696
rsl1d1

▼ OVERVIEW

Status: Unreviewed
Protein Name: Ribosomal L1 domain-containing 1
Gene Name: rsl1d1, si:dkey-16i5.10
Ensembl Gene: ENSDARG00000055868.5
Ensembl Protein: ENSDARP00000072728.4
Organism: Danio rerio
Taxa ID: 7955
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
NucleolusPredicted from orthologs(View)

▼ CROSS REFERENCE

DatabaseNucleotide IDProtein ID
EnsemblENSDART00000078266.5ENSDARP00000072728.4
UniProtF1R8M8, F1R8M8_DANRE
GeneBankBX649366
RefSeqNM_001326710.1NP_001313639.1
Entrez563247

▼ SEQUENCE

Protein Sequence (FASTA)
1     MLFLLFRHTC  SMETPRDELT  IDQSQVKKAA  QALQAFIKNS  TSSQKLFQND  GQPISLLFTL  60
61    WKIPKKEQTI  RIPLSHGLRT  ESGDVCLFTR  DEPNMTAEQT  ERFYKKLLTE  RGVKNVTEVI  120
121   PFKALRTEYK  PFEAKRKLLG  NFDLFLSDAR  IRFRLPSQIG  KHFYERKKAP  LSVDLESKHL  180
181   ARDMERLIQG  TTLTVSTKGP  CCMARVAHSE  MTADQIVENV  ISAVSTISAK  LASTGKNIKI  240
241   IHLKSQTSVA  LPIYTSDLSH  LALVEEAQKK  ARLTKGAQKR  KRKTENTEAP  KPVTKETEEE  300
301   KDSEEEIPQL  VPIETPKKKT  KREGLSKKGL  KKVPKPAAGN  SVKKSVKDKK  LVKKTPKRTE  360
361   RGLEKKKLKT  NKT  373
Nucleotide CDS Sequence (FASTA)
1     ATGCTCTTTT  TGCTCTTTCG  CCACACGTGC  AGCATGGAGA  CCCCACGAGA  TGAGTTGACT  60
61    ATCGATCAGT  CTCAGGTGAA  AAAAGCAGCA  CAGGCATTAC  AGGCGTTTAT  AAAAAACAGC  120
121   ACATCGTCCC  AGAAACTCTT  CCAGAATGAC  GGTCAGCCCA  TCTCTCTACT  TTTTACCTTA  180
181   TGGAAGATTC  CTAAAAAGGA  GCAAACCATT  CGCATTCCGT  TATCTCATGG  ACTGAGGACA  240
241   GAATCTGGAG  ACGTGTGTCT  TTTCACCAGA  GATGAACCCA  ACATGACTGC  AGAACAGACA  300
301   GAGAGATTCT  ACAAGAAGTT  ACTCACAGAG  AGAGGGGTCA  AAAATGTCAC  AGAGGTGATT  360
361   CCCTTCAAGG  CATTGAGGAC  CGAGTATAAG  CCATTTGAAG  CAAAGAGAAA  ACTGCTTGGC  420
421   AACTTTGATT  TGTTCCTGTC  AGACGCACGC  ATTCGGTTCA  GGTTACCTTC  CCAAATTGGG  480
481   AAACATTTCT  ATGAAAGGAA  AAAGGCTCCT  TTGTCAGTGG  ATCTAGAGAG  TAAACATCTG  540
541   GCCAGAGACA  TGGAGCGCCT  CATTCAGGGC  ACAACTCTCA  CCGTCTCAAC  TAAAGGCCCT  600
601   TGCTGCATGG  CCCGTGTGGC  ACATTCAGAA  ATGACAGCAG  ATCAGATTGT  TGAGAATGTG  660
661   ATCTCAGCCG  TTTCCACAAT  TTCAGCAAAG  TTAGCATCAA  CAGGAAAAAA  CATAAAAATC  720
721   ATCCATTTGA  AGAGTCAGAC  ATCAGTAGCG  CTACCCATCT  ACACCTCTGA  TCTGAGTCAT  780
781   CTCGCGTTGG  TGGAGGAGGC  CCAGAAGAAA  GCCCGTTTAA  CAAAGGGAGC  GCAAAAGAGG  840
841   AAGAGAAAAA  CTGAAAATAC  AGAAGCGCCC  AAACCAGTAA  CTAAAGAGAC  TGAGGAAGAG  900
901   AAAGACAGCG  AAGAGGAAAT  ACCACAGCTG  GTGCCAATCG  AGACGCCAAA  GAAAAAGACA  960
961   AAACGGGAGG  GCCTATCTAA  AAAAGGACTG  AAAAAAGTGC  CCAAGCCTGC  TGCTGGCAAC  1020
1021  AGTGTGAAGA  AATCTGTAAA  GGACAAAAAA  CTTGTCAAGA  AAACACCCAA  ACGCACAGAA  1080
1081  CGTGGTCTGG  AAAAAAAAAA  GCTAAAAACA  AATAAAACCT  GA  1122

▼ ANNOTATION

Disorder
D2P2IUPred2A
PTM
EPSD
Interaction
MIST
Physicochemical
AAindex

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Xim-0335Xiphophorus maculatus65.712e-117 352
LLPS-Leo-0319Lepisosteus oculatus63.173e-136 402
LLPS-Scf-1015Scleropages formosus62.54e-122 363
LLPS-Scm-0441Scophthalmus maximus62.072e-120 359
LLPS-Asm-1622Astyanax mexicanus61.854e-141 413
LLPS-Pof-0166Poecilia formosa61.244e-117 351
LLPS-Icp-0457Ictalurus punctatus61.144e-140 411
LLPS-Orn-0672Oreochromis niloticus59.353e-125 372
LLPS-Tar-2108Takifugu rubripes58.86e-118 353
LLPS-Ten-2742Tetraodon nigroviridis57.329e-118 353
LLPS-Anp-0085Anas platyrhynchos56.961e-93 294
LLPS-Xet-0165Xenopus tropicalis55.693e-92 291
LLPS-Fia-2392Ficedula albicollis55.274e-89 283
LLPS-Tag-1481Taeniopygia guttata54.365e-94 288
LLPS-Orl-1091Oryzias latipes53.714e-120 358
LLPS-Gaa-0085Gasterosteus aculeatus53.097e-116 348
LLPS-Gaga-2101Gallus gallus52.72e-90 285
LLPS-Mod-3830Monodelphis domestica50.846e-86 275
LLPS-Pes-2113Pelodiscus sinensis50.192e-88 281
LLPS-Ora-0606Ornithorhynchus anatinus49.545e-69 229
LLPS-Ict-1771Ictidomys tridecemlineatus47.788e-64 216
LLPS-Caj-0272Callithrix jacchus46.679e-76 249
LLPS-Aon-1938Aotus nancymaae46.253e-75 248
LLPS-Bot-0117Bos taurus46.152e-78 255
LLPS-Loa-1817Loxodonta africana45.312e-72 239
LLPS-Sus-0859Sus scrofa45.197e-76 249
LLPS-Myl-1101Myotis lucifugus45.197e-75 247
LLPS-Fec-1574Felis catus44.947e-76 249
LLPS-Ova-2993Ovis aries44.943e-75 247
LLPS-Eqc-0621Equus caballus44.775e-73 242
LLPS-Otg-0784Otolemur garnettii44.761e-75 248
LLPS-Ran-1172Rattus norvegicus44.636e-68 228
LLPS-Caf-1318Canis familiaris44.132e-73 243
LLPS-Mup-3829Mustela putorius furo43.91e-72 241
LLPS-Pap-2506Pan paniscus43.875e-71 236
LLPS-Hos-0012Homo sapiens43.874e-71 236
LLPS-Nol-0031Nomascus leucogenys43.74e-71 237
LLPS-Aim-2720Ailuropoda melanoleuca43.517e-71 236
LLPS-Pat-2923Pan troglodytes43.488e-71 236
LLPS-Gog-0255Gorilla gorilla43.483e-70 234
LLPS-Fud-2232Fukomys damarensis43.332e-69 231
LLPS-Man-2269Macaca nemestrina43.312e-70 235
LLPS-Chs-0316Chlorocebus sabaeus43.312e-70 235
LLPS-Mal-0534Mandrillus leucophaeus43.311e-70 235
LLPS-Mam-1434Macaca mulatta42.914e-70 234
LLPS-Maf-2127Macaca fascicularis42.913e-70 234
LLPS-Paa-1874Papio anubis42.913e-70 234
LLPS-Orc-0756Oryctolagus cuniculus42.863e-73 242
LLPS-Cea-0036Cercocebus atys42.521e-69 233
LLPS-Rhb-3654Rhinopithecus bieti42.311e-70 235
LLPS-Cap-0050Cavia porcellus42.263e-65 221
LLPS-Mum-2277Mus musculus41.769e-72 238
LLPS-Cas-0000Carlito syrichta41.613e-70 234
LLPS-Urm-0317Ursus maritimus40.171e-58 203
LLPS-Poa-0765Pongo abelii40.161e-54 192
LLPS-Hea-2154Helianthus annuus38.944e-34 135
LLPS-Zyt-0258Zymoseptoria tritici37.54e-0856.6
LLPS-Dio-1980Dipodomys ordii37.07e-49 176
LLPS-Bro-2391Brassica oleracea36.942e-30 124
LLPS-Brn-1843Brassica napus36.941e-30 125
LLPS-Sol-0249Solanum lycopersicum36.933e-37 144
LLPS-Sot-1829Solanum tuberosum36.933e-37 144
LLPS-Orm-1449Oryza meridionalis35.836e-27 117
LLPS-Lep-0379Leersia perrieri35.633e-2199.4
LLPS-Nia-0976Nicotiana attenuata35.322e-33 133
LLPS-Glm-0178Glycine max35.196e-32 129
LLPS-Tra-2514Triticum aestivum35.122e-29 122
LLPS-Orp-0701Oryza punctata34.924e-28 118
LLPS-Cus-0991Cucumis sativus34.919e-35 136
LLPS-Sei-0686Setaria italica34.783e-26 115
LLPS-Vir-0577Vigna radiata34.767e-32 129
LLPS-Hov-1032Hordeum vulgare34.634e-29 121
LLPS-Prp-0137Prunus persica34.474e-34 136
LLPS-Arl-0471Arabidopsis lyrata34.383e-29 121
LLPS-Brd-0552Brachypodium distachyon34.128e-28 117
LLPS-Gor-0494Gossypium raimondii33.94e-33 132
LLPS-Phv-0269Phaseolus vulgaris33.894e-34 135
LLPS-Coc-1750Corchorus capsularis33.746e-31 125
LLPS-Crn-0392Cryptococcus neoformans33.711e-24 107
LLPS-Orb-0928Oryza barthii33.514e-26 112
LLPS-Scj-1154Schizosaccharomyces japonicus33.511e-25 110
LLPS-Thc-0647Theobroma cacao33.477e-25 107
LLPS-Osl-0375Ostreococcus lucimarinus33.331e-31 126
LLPS-Cii-0440Ciona intestinalis33.334e-36 137
LLPS-Chc-0706Chondrus crispus33.338e-1476.6
LLPS-Viv-0770Vitis vinifera33.26e-29 120
LLPS-Ors-0545Oryza sativa33.163e-26 112
LLPS-Orr-0977Oryza rufipogon33.163e-26 112
LLPS-Org-0292Oryza glaberrima33.163e-26 112
LLPS-Ori-0142Oryza indica33.166e-25 111
LLPS-Orni-1477Oryza nivara33.163e-26 112
LLPS-Orgl-1312Oryza glumaepatula33.163e-26 112
LLPS-Orbr-0404Oryza brachyantha33.143e-2095.1
LLPS-Brr-0702Brassica rapa32.641e-26 114
LLPS-Cis-0391Ciona savignyi32.629e-33 130
LLPS-Mel-0140Melampsora laricipopulina32.549e-27 112
LLPS-Php-1046Physcomitrella patens32.513e-28 117
LLPS-Pug-0866Puccinia graminis32.425e-24 105
LLPS-Spr-0714Sporisorium reilianum32.411e-30 125
LLPS-Sem-1344Selaginella moellendorffii32.372e-32 127
LLPS-Zem-0183Zea mays32.352e-26 112
LLPS-Scc-0852Schizosaccharomyces cryophilus32.277e-27 114
LLPS-Met-1780Medicago truncatula32.234e-32 129
LLPS-Dac-1009Daucus carota32.073e-27 115
LLPS-Put-0841Puccinia triticina32.022e-22 100
LLPS-Chr-1019Chlamydomonas reinhardtii31.931e-2094.4
LLPS-Art-0684Arabidopsis thaliana31.911e-27 116
LLPS-Amt-0950Amborella trichopoda31.642e-32 131
LLPS-Scp-1387Schizosaccharomyces pombe31.584e-23 102
LLPS-Mae-0204Manihot esculenta31.251e-27 116
LLPS-Miv-0023Microbotryum violaceum31.085e-26 111
LLPS-Abg-0618Absidia glauca30.95e-27 112
LLPS-Dos-0805Dothistroma septosporum30.432e-1992.8
LLPS-Pot-0057Populus trichocarpa30.258e-27 114
LLPS-Fuv-1055Fusarium verticillioides30.256e-2299.4
LLPS-Trr-0396Trichoderma reesei30.126e-2196.7
LLPS-Mua-1399Musa acuminata29.638e-28 117
LLPS-Fuo-1151Fusarium oxysporum29.585e-2299.8
LLPS-Cog-0859Colletotrichum gloeosporioides29.478e-1887.8
LLPS-Sob-1153Sorghum bicolor29.328e-27 114
LLPS-Cogr-1502Colletotrichum graminicola29.283e-1992.0
LLPS-Aso-0579Aspergillus oryzae28.853e-1992.0
LLPS-Asf-0246Aspergillus flavus28.853e-1992.0
LLPS-Mao-0287Magnaporthe oryzae28.762e-1477.8
LLPS-Fus-1045Fusarium solani28.622e-2095.1
LLPS-Asni-0300Aspergillus niger28.573e-1683.6
LLPS-Kop-0244Komagataella pastoris28.354e-1477.4
LLPS-Gas-0271Galdieria sulphuraria28.349e-25 105
LLPS-Coo-0939Colletotrichum orbiculare28.332e-1787.0
LLPS-Phn-0646Phaeosphaeria nodorum28.012e-1992.4
LLPS-Trv-0798Trichoderma virens27.871e-1787.0
LLPS-Asc-1197Aspergillus clavatus27.854e-1580.1
LLPS-Asn-1039Aspergillus nidulans27.852e-1581.3
LLPS-Asg-1169Ashbya gossypii27.786e-0858.2
LLPS-Drm-0279Drosophila melanogaster27.781e-1788.6
LLPS-Tum-0517Tuber melanosporum27.766e-1579.0
LLPS-Cym-0327Cyanidioschyzon merolae27.698e-1784.3
LLPS-Ast-0560Aspergillus terreus27.66e-1682.4
LLPS-Yal-0408Yarrowia lipolytica27.072e-1478.2
LLPS-Ved-1274Verticillium dahliae27.021e-1890.1
LLPS-Usm-1152Ustilago maydis26.858e-23 102
LLPS-Asfu-0117Aspergillus fumigatus26.675e-1579.7
LLPS-Beb-0512Beauveria bassiana26.621e-1787.8
LLPS-Lem-0103Leptosphaeria maculans25.894e-1374.7
LLPS-Pytr-0207Pyrenophora triticirepentis25.872e-1683.6
LLPS-Pyt-0491Pyrenophora teres25.819e-1579.0
LLPS-Nef-0528Neosartorya fischeri25.14e-1683.2
LLPS-Cae-0882Caenorhabditis elegans24.524e-0755.8
LLPS-Nec-1430Neurospora crassa23.611e-1066.6
LLPS-Blg-0564Blumeria graminis23.132e-1168.6
LLPS-Gag-0893Gaeumannomyces graminis22.654e-0755.5