LLPS-Scm-0316
SMAX5B_019406
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Putative RNA-binding protein 27 |
Gene Name: | SMAX5B_019406 |
Ensembl Gene: | ENSSMAG00000004138.1 |
Ensembl Protein: | ENSSMAP00000006700.1 |
Organism: | Scophthalmus maximus |
Taxa ID: | 52904 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSSMAT00000006784.1 | ENSSMAP00000006700.1 |
UniProt | A0A2U9B7U7, A0A2U9B7U7_SCOMX | |
GeneBank | CP026246 | AWO99943.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MIIEHVEALK SWLAKLLEPI CDADPSALAN YVVALVKKDK PEKELKALCA DQLDVFLQKE 60 61 TTGFVDKLFE CLTTKNYLGS PAAKEGPKEE VKPPTVKTDV VEVETQEEER ENRWRRSPLR 120 121 NRPDFNESRN RDDRRRDERK RRDFDRYGKS SSDSHRERER HERRRGSPRG RSYSRSRSRS 180 181 GSRGKSRDKE HRGGRDFKSK FEVERKDNDG YNSSTTSGPQ QQQQQQQQHQ HQQQQHQQHP 240 241 PPLLPLPTPP HPFSSSSSSS AGGVPVATLA HLPDSTTDSW SGYYGNQRRD VVGKPFNSNK 300 301 VVSLKQRCRD YDEKGFCVRG DLCPFDHGND PLIVDDVNLP NMIPFPPPPV MPPAGLPMPP 360 361 ITEPPPSLRI PPMPPYGQPA PPGVFPISNN YDPEGYNPES PALTTAGRNQ YRQFIPRVQT 420 421 QRSNLIGLTS NEGQGSRAAN IVIQTEPVTA ASTPGSNVSR FNSEQDSRKR IMGHSTAEGP 480 481 VPKKPWIEKT NFNNQHKGIF PKRNHYMNTK LEVRKIPREL NNITKLNEHF SKFGTIVNIQ 540 541 VVFGGDPEAA LIQYTKNEEA RRAISSIEAV LNNRFIRVYW HRECGVNATG LQQQEQSSGS 600 601 LAAGLAPSQG LQHSNVHKGI KQHSPAAYVL NNTVPKHRLP AAAGNTAATR TDSLNPNTDA 660 661 SAVAPALTNT QKSPYTSTAL KSSSKSLGKT GKALEAQEVH KKKQEALKLQ QDMRKKKQEM 720 721 LQTQIECQKT LINRLEKNRG MKPEDRAKIM KTLKDLTDKI TQLQNEMNPA SQVSSTKSNH 780 781 SQTKTKTDAQ KELLDAELDF HQKMSSGEDT TDLKRKLGQL QVEATRLGLI RPPAGRGRGR 840 841 GKMALEPGSM HVGRGRGRSR EMMARGGTVN RMSVDHRPRA LAILGVTKEE KEELMPHFVK 900 901 FGEVEDLRDQ DANSVVMTFK TRSEAENAAN QGAKFKGRVL QISWYKPKMP SIATEPEEEE 960 961 AKDEENKKEA SSYLPGEEEE EEEEDDDEDD EYESRSWRR 999 |
Nucleotide CDS Sequence (FASTA) |
1 ATGATCATAG AGCATGTGGA AGCCTTGAAG TCGTGGCTGG CAAAACTCCT GGAGCCGATA 60 61 TGTGATGCTG ACCCCTCTGC ATTAGCCAAC TATGTGGTTG CTCTTGTGAA GAAGGACAAA 120 121 CCGGAGAAGG AGCTGAAAGC ACTCTGTGCC GATCAGCTTG ACGTCTTCCT ACAAAAAGAG 180 181 ACGACAGGAT TTGTGGATAA ACTATTTGAA TGTCTGACAA CAAAGAACTA CCTGGGAAGT 240 241 CCTGCTGCCA AGGAGGGTCC TAAAGAGGAG GTCAAACCGC CTACAGTGAA GACAGACGTT 300 301 GTGGAGGTTG AAACTCAAGA GGAGGAGAGA GAAAACAGGT GGAGGAGAAG TCCTCTGAGA 360 361 AATCGCCCTG ACTTCAATGA GTCCAGGAAT CGAGATGACA GGAGACGAGA TGAGCGCAAG 420 421 CGCCGCGACT TCGATCGGTA CGGGAAGAGC AGCAGCGACT CCCACCGCGA GCGAGAGCGG 480 481 CACGAGCGTC GCAGGGGCAG CCCCCGGGGG AGGAGCTACA GCCGCAGCCG GAGCCGGAGT 540 541 GGCAGCCGAG GAAAGAGCAG GGACAAGGAA CACAGAGGAG GCAGAGATTT TAAGTCAAAG 600 601 TTTGAGGTGG AAAGAAAGGA TAACGACGGC TACAACTCTT CAACCACGTC CGGCCCCCAG 660 661 CAGCAGCAGC AGCAGCAGCA GCAACACCAG CACCAGCAGC AGCAGCACCA GCAGCACCCT 720 721 CCGCCCCTCC TGCCCCTGCC CACACCTCCA CACCCCTTCT CCTCCTCGTC CTCGTCGTCC 780 781 GCCGGAGGCG TTCCTGTAGC AACACTGGCT CACCTGCCCG ATAGCACGAC AGACAGCTGG 840 841 TCTGGCTACT ATGGCAACCA GAGGCGAGAT GTTGTCGGGA AGCCGTTCAA CAGCAACAAG 900 901 GTTGTTTCAC TCAAACAGCG TTGCAGGGAT TACGATGAAA AAGGATTTTG CGTCCGCGGT 960 961 GACCTCTGTC CATTCGACCA CGGCAACGAC CCTCTCATCG TGGACGATGT CAATCTACCA 1020 1021 AATATGATTC CATTCCCGCC ACCGCCTGTA ATGCCCCCCG CCGGCCTGCC CATGCCCCCG 1080 1081 ATCACCGAGC CGCCCCCTTC CCTCAGGATA CCGCCGATGC CACCTTATGG CCAGCCGGCA 1140 1141 CCACCGGGCG TCTTTCCCAT AAGTAATAAC TACGATCCAG AGGGCTACAA CCCAGAATCC 1200 1201 CCAGCCCTGA CCACAGCAGG CCGTAACCAG TACCGTCAGT TCATTCCCCG CGTGCAGACC 1260 1261 CAGCGCTCCA ACCTCATCGG CCTCACCTCC AACGAAGGAC AAGGGTCCAG AGCTGCAAAC 1320 1321 ATAGTGATCC AGACGGAGCC GGTCACTGCA GCCAGCACTC CTGGAAGTAA CGTGTCCCGT 1380 1381 TTCAACTCGG AGCAGGACAG CAGGAAGAGA ATCATGGGAC ACAGTACAGC TGAGGGACCA 1440 1441 GTGCCTAAAA AACCCTGGAT AGAAAAGACA AACTTCAACA ACCAACATAA GGGCATTTTT 1500 1501 CCCAAGAGGA ATCACTACAT GAACACCAAG CTGGAGGTTC GCAAGATCCC CCGAGAGCTC 1560 1561 AACAACATCA CCAAGCTCAA TGAGCACTTC AGCAAGTTCG GAACCATCGT CAACATACAG 1620 1621 GTTGTGTTTG GTGGAGACCC AGAGGCGGCG TTGATTCAGT ACACGAAAAA CGAAGAGGCC 1680 1681 AGGCGGGCCA TTTCCAGCAT CGAAGCCGTC CTCAACAACC GCTTCATCCG AGTGTACTGG 1740 1741 CACCGTGAGT GCGGCGTCAA CGCCACAGGG CTTCAGCAGC AGGAGCAGAG CTCGGGGAGC 1800 1801 CTGGCGGCTG GATTAGCCCC CAGCCAGGGG CTACAGCACA GCAACGTGCA CAAGGGAATT 1860 1861 AAACAGCACA GTCCAGCTGC ATATGTTTTG AACAACACTG TACCAAAGCA TCGCCTGCCA 1920 1921 GCAGCGGCTG GCAACACAGC TGCAACCAGG ACGGACAGTC TGAACCCAAA CACGGATGCC 1980 1981 TCCGCAGTGG CGCCTGCGCT GACAAACACC CAGAAGAGCC CCTACACTTC TACAGCCCTC 2040 2041 AAGTCGTCCT CAAAGAGCCT TGGGAAAACG GGAAAAGCAC TAGAAGCACA GGAAGTCCAC 2100 2101 AAGAAGAAAC AGGAGGCATT AAAACTCCAG CAGGACATGA GAAAGAAGAA GCAAGAGATG 2160 2161 CTACAGACAC AGATCGAATG TCAGAAGACC TTGATAAACC GCCTGGAGAA GAACCGAGGG 2220 2221 ATGAAACCTG AGGACAGAGC CAAAATCATG AAGACCCTGA AGGACCTGAC AGACAAAATC 2280 2281 ACCCAACTGC AGAACGAGAT GAATCCAGCC TCCCAGGTCT CCAGCACCAA ATCCAACCAC 2340 2341 AGTCAGACAA AGACCAAGAC CGATGCCCAG AAGGAACTGC TGGATGCAGA GCTGGACTTT 2400 2401 CACCAAAAGA TGAGCTCCGG AGAAGACACG ACAGACCTCA AGAGAAAACT GGGGCAGCTA 2460 2461 CAGGTGGAGG CGACGCGGTT GGGTCTGATC CGGCCTCCGG CAGGTCGCGG TCGGGGTCGA 2520 2521 GGGAAGATGG CACTCGAGCC CGGTTCGATG CACGTCGGCC GCGGAAGGGG CCGGAGCCGG 2580 2581 GAGATGATGG CTCGCGGCGG GACCGTGAAC CGCATGTCGG TCGACCACAG ACCCAGAGCC 2640 2641 CTGGCCATCC TGGGGGTCAC CAAGGAGGAG AAAGAAGAGC TGATGCCACA CTTTGTGAAA 2700 2701 TTTGGGGAGG TTGAGGATCT CCGTGACCAA GACGCTAACA GTGTCGTCAT GACCTTCAAA 2760 2761 ACACGAAGCG AAGCAGAGAA TGCAGCTAAC CAGGGAGCTA AGTTCAAAGG TCGAGTCCTG 2820 2821 CAGATATCCT GGTACAAGCC CAAGATGCCC TCTATTGCAA CGGAGCCGGA GGAGGAAGAG 2880 2881 GCTAAAGACG AGGAAAATAA GAAGGAAGCT AGCTCTTATT TGCCCGGTGA GGAGGAAGAG 2940 2941 GAGGAGGAAG AGGACGACGA CGAAGACGAC GAGTACGAGA GCCGATCGTG GAGACGGTGA 3000 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Orn-2665 | Oreochromis niloticus | 95.51 | 9e-45 | 180 |
LLPS-Gaa-3138 | Gasterosteus aculeatus | 93.26 | 6e-43 | 174 |
LLPS-Ora-1244 | Ornithorhynchus anatinus | 93.1 | 2e-25 | 117 |
LLPS-Paa-2305 | Papio anubis | 93.1 | 2e-25 | 117 |
LLPS-Dar-2575 | Danio rerio | 92.94 | 5e-42 | 171 |
LLPS-Mea-1100 | Mesocricetus auratus | 92.31 | 1e-37 | 157 |
LLPS-Lac-4025 | Latimeria chalumnae | 92.31 | 2e-37 | 156 |
LLPS-Xim-0140 | Xiphophorus maculatus | 92.13 | 2e-43 | 175 |
LLPS-Pof-3138 | Poecilia formosa | 92.13 | 2e-43 | 176 |
LLPS-Leo-3029 | Lepisosteus oculatus | 91.21 | 9e-42 | 170 |
LLPS-Caj-0950 | Callithrix jacchus | 91.03 | 2e-36 | 153 |
LLPS-Fud-1625 | Fukomys damarensis | 91.03 | 2e-36 | 153 |
LLPS-Gog-0821 | Gorilla gorilla | 91.03 | 3e-36 | 153 |
LLPS-Sus-0142 | Sus scrofa | 91.03 | 1e-36 | 154 |
LLPS-Aon-3670 | Aotus nancymaae | 91.03 | 3e-36 | 152 |
LLPS-Cea-4563 | Cercocebus atys | 91.03 | 3e-36 | 153 |
LLPS-Chs-1568 | Chlorocebus sabaeus | 91.03 | 2e-36 | 153 |
LLPS-Maf-3324 | Macaca fascicularis | 91.03 | 3e-36 | 153 |
LLPS-Mum-2363 | Mus musculus | 91.03 | 2e-36 | 153 |
LLPS-Aim-0498 | Ailuropoda melanoleuca | 91.03 | 2e-36 | 153 |
LLPS-Mup-0462 | Mustela putorius furo | 91.03 | 3e-36 | 153 |
LLPS-Ova-2577 | Ovis aries | 91.03 | 2e-36 | 153 |
LLPS-Myl-1819 | Myotis lucifugus | 91.03 | 2e-36 | 153 |
LLPS-Mal-4728 | Mandrillus leucophaeus | 91.03 | 3e-36 | 153 |
LLPS-Ran-1001 | Rattus norvegicus | 91.03 | 2e-36 | 153 |
LLPS-Bot-1466 | Bos taurus | 91.03 | 2e-36 | 153 |
LLPS-Dio-2845 | Dipodomys ordii | 91.03 | 2e-36 | 153 |
LLPS-Rhb-1849 | Rhinopithecus bieti | 91.03 | 2e-36 | 152 |
LLPS-Orc-1966 | Oryctolagus cuniculus | 91.03 | 3e-36 | 153 |
LLPS-Otg-0922 | Otolemur garnettii | 91.03 | 2e-36 | 153 |
LLPS-Loa-1225 | Loxodonta africana | 91.03 | 2e-36 | 153 |
LLPS-Mod-2009 | Monodelphis domestica | 91.03 | 2e-36 | 153 |
LLPS-Fec-1764 | Felis catus | 91.03 | 2e-36 | 153 |
LLPS-Hos-1893 | Homo sapiens | 91.03 | 2e-36 | 153 |
LLPS-Pat-1889 | Pan troglodytes | 91.03 | 2e-36 | 153 |
LLPS-Pap-3984 | Pan paniscus | 91.03 | 2e-36 | 153 |
LLPS-Nol-2322 | Nomascus leucogenys | 91.03 | 2e-36 | 153 |
LLPS-Ict-4168 | Ictidomys tridecemlineatus | 91.03 | 2e-36 | 153 |
LLPS-Cas-0157 | Carlito syrichta | 91.03 | 3e-36 | 153 |
LLPS-Mam-3456 | Macaca mulatta | 91.03 | 3e-36 | 153 |
LLPS-Eqc-1522 | Equus caballus | 91.03 | 3e-36 | 153 |
LLPS-Poa-2136 | Pongo abelii | 91.03 | 2e-36 | 153 |
LLPS-Caf-3455 | Canis familiaris | 91.03 | 2e-36 | 153 |
LLPS-Asm-1731 | Astyanax mexicanus | 91.01 | 5e-43 | 174 |
LLPS-Orl-0506 | Oryzias latipes | 91.01 | 4e-42 | 171 |
LLPS-Pes-3381 | Pelodiscus sinensis | 90.0 | 5e-37 | 155 |
LLPS-Anp-2590 | Anas platyrhynchos | 90.0 | 6e-25 | 116 |
LLPS-Tag-1195 | Taeniopygia guttata | 90.0 | 6e-25 | 116 |
LLPS-Fia-2518 | Ficedula albicollis | 88.71 | 2e-25 | 118 |
LLPS-Anc-1066 | Anolis carolinensis | 88.61 | 6e-36 | 152 |
LLPS-Cap-2585 | Cavia porcellus | 88.46 | 2e-33 | 143 |
LLPS-Icp-3231 | Ictalurus punctatus | 87.64 | 2e-40 | 166 |
LLPS-Gaga-2794 | Gallus gallus | 87.5 | 7e-36 | 151 |
LLPS-Meg-0095 | Meleagris gallopavo | 86.15 | 2e-24 | 115 |
LLPS-Tar-1063 | Takifugu rubripes | 81.97 | 1e-41 | 170 |
LLPS-Ten-0534 | Tetraodon nigroviridis | 81.97 | 1e-41 | 170 |
LLPS-Xet-0917 | Xenopus tropicalis | 81.36 | 4e-21 | 103 |
LLPS-Scf-3966 | Scleropages formosus | 80.77 | 1e-30 | 134 |
LLPS-Man-1874 | Macaca nemestrina | 77.78 | 3e-30 | 133 |
LLPS-Urm-0653 | Ursus maritimus | 76.32 | 3e-27 | 124 |
LLPS-Sah-1768 | Sarcophilus harrisii | 75.81 | 4e-20 | 100 |
LLPS-Cii-0419 | Ciona intestinalis | 62.82 | 8e-24 | 112 |
LLPS-Mua-2218 | Musa acuminata | 60.61 | 5e-08 | 61.2 |
LLPS-Lep-0501 | Leersia perrieri | 59.38 | 2e-07 | 59.3 |
LLPS-Drm-0005 | Drosophila melanogaster | 58.82 | 2e-08 | 62.8 |
LLPS-Hea-1573 | Helianthus annuus | 57.58 | 2e-07 | 59.7 |
LLPS-Cus-0483 | Cucumis sativus | 57.58 | 3e-07 | 58.9 |
LLPS-Sei-0853 | Setaria italica | 57.58 | 6e-08 | 61.2 |
LLPS-Sot-2238 | Solanum tuberosum | 57.58 | 2e-07 | 59.3 |
LLPS-Nia-0625 | Nicotiana attenuata | 57.58 | 2e-07 | 59.3 |
LLPS-Sob-1149 | Sorghum bicolor | 57.58 | 6e-08 | 61.2 |
LLPS-Pot-2132 | Populus trichocarpa | 57.58 | 2e-07 | 59.3 |
LLPS-Viv-1004 | Vitis vinifera | 57.58 | 2e-07 | 59.3 |
LLPS-Zem-2549 | Zea mays | 57.58 | 7e-08 | 60.8 |
LLPS-Prp-1133 | Prunus persica | 57.58 | 2e-07 | 59.3 |
LLPS-Dac-1243 | Daucus carota | 56.25 | 3e-07 | 58.9 |
LLPS-Cae-0922 | Caenorhabditis elegans | 54.76 | 3e-16 | 87.8 |
LLPS-Orb-1066 | Oryza barthii | 54.55 | 3e-07 | 58.9 |
LLPS-Tra-1279 | Triticum aestivum | 54.55 | 3e-07 | 58.9 |
LLPS-Brd-0813 | Brachypodium distachyon | 54.55 | 2e-07 | 59.7 |
LLPS-Hov-1537 | Hordeum vulgare | 54.55 | 3e-07 | 58.9 |
LLPS-Orgl-1796 | Oryza glumaepatula | 54.55 | 2e-07 | 59.3 |
LLPS-Phv-1455 | Phaseolus vulgaris | 54.55 | 3e-07 | 58.9 |
LLPS-Orbr-2217 | Oryza brachyantha | 54.55 | 3e-07 | 58.9 |
LLPS-Orp-1335 | Oryza punctata | 54.55 | 3e-07 | 58.9 |
LLPS-Ors-1248 | Oryza sativa | 54.55 | 2e-07 | 59.3 |
LLPS-Tru-1345 | Triticum urartu | 54.55 | 3e-07 | 58.9 |
LLPS-Org-1509 | Oryza glaberrima | 54.55 | 2e-07 | 59.3 |
LLPS-Orr-1808 | Oryza rufipogon | 54.55 | 2e-07 | 59.3 |
LLPS-Orm-0474 | Oryza meridionalis | 54.55 | 2e-07 | 59.3 |
LLPS-Spr-0656 | Sporisorium reilianum | 52.7 | 2e-15 | 85.5 |
LLPS-Met-0540 | Medicago truncatula | 52.27 | 4e-08 | 62.0 |
LLPS-Sem-2372 | Selaginella moellendorffii | 51.56 | 2e-10 | 69.3 |
LLPS-Thc-2080 | Theobroma cacao | 50.0 | 8e-08 | 60.8 |
LLPS-Vir-1158 | Vigna radiata | 50.0 | 5e-08 | 61.6 |
LLPS-Via-0622 | Vigna angularis | 50.0 | 5e-08 | 61.6 |
LLPS-Gor-2221 | Gossypium raimondii | 50.0 | 1e-07 | 60.5 |
LLPS-Coc-1993 | Corchorus capsularis | 50.0 | 1e-07 | 60.5 |
LLPS-Zyt-1225 | Zymoseptoria tritici | 49.3 | 3e-12 | 74.7 |
LLPS-Usm-0995 | Ustilago maydis | 48.75 | 2e-15 | 85.1 |
LLPS-Scp-0698 | Schizosaccharomyces pombe | 48.72 | 1e-15 | 85.5 |
LLPS-Mae-0919 | Manihot esculenta | 47.83 | 3e-07 | 59.3 |
LLPS-Glm-2206 | Glycine max | 47.73 | 2e-07 | 59.7 |
LLPS-Tum-0911 | Tuber melanosporum | 47.73 | 2e-07 | 59.3 |
LLPS-Abg-0351 | Absidia glauca | 46.94 | 6e-07 | 57.8 |
LLPS-Pug-0724 | Puccinia graminis | 44.74 | 1e-11 | 73.2 |
LLPS-Asfu-0934 | Aspergillus fumigatus | 43.28 | 3e-09 | 65.5 |
LLPS-Yal-1156 | Yarrowia lipolytica | 42.86 | 2e-09 | 65.5 |
LLPS-Nef-0851 | Neosartorya fischeri | 42.65 | 3e-09 | 65.5 |
LLPS-Asc-0733 | Aspergillus clavatus | 41.79 | 2e-09 | 65.9 |
LLPS-Sol-2383 | Solanum lycopersicum | 41.43 | 3e-09 | 65.1 |
LLPS-Crn-0923 | Cryptococcus neoformans | 41.38 | 1e-11 | 72.8 |
LLPS-Dos-0427 | Dothistroma septosporum | 40.96 | 7e-08 | 60.8 |
LLPS-Asf-0389 | Aspergillus flavus | 40.3 | 3e-09 | 65.5 |
LLPS-Aso-1480 | Aspergillus oryzae | 40.3 | 3e-09 | 65.5 |
LLPS-Ast-0846 | Aspergillus terreus | 40.3 | 2e-08 | 63.2 |
LLPS-Amt-0204 | Amborella trichopoda | 40.0 | 3e-07 | 59.3 |
LLPS-Scc-1151 | Schizosaccharomyces cryophilus | 39.74 | 2e-08 | 61.6 |
LLPS-Php-0307 | Physcomitrella patens | 38.46 | 5e-07 | 58.2 |
LLPS-Brn-0479 | Brassica napus | 37.84 | 2e-09 | 65.9 |
LLPS-Bro-1216 | Brassica oleracea | 37.84 | 2e-09 | 65.9 |
LLPS-Arl-0936 | Arabidopsis lyrata | 37.14 | 2e-07 | 59.3 |
LLPS-Brr-1068 | Brassica rapa | 37.14 | 4e-08 | 61.6 |
LLPS-Art-2721 | Arabidopsis thaliana | 37.14 | 3e-07 | 58.9 |
LLPS-Fus-1531 | Fusarium solani | 36.99 | 5e-09 | 64.3 |
LLPS-Orni-1467 | Oryza nivara | 36.71 | 1e-08 | 62.8 |
LLPS-Beb-0061 | Beauveria bassiana | 36.47 | 9e-11 | 70.1 |
LLPS-Fuv-0758 | Fusarium verticillioides | 35.29 | 1e-08 | 63.5 |
LLPS-Fuo-0389 | Fusarium oxysporum | 35.29 | 9e-09 | 63.5 |
LLPS-Trr-1541 | Trichoderma reesei | 35.14 | 8e-08 | 60.5 |