LLPS-Ran-3463
Tmod3
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | RCG25684, isoform CRA_a |
Gene Name: | Tmod3, rCG_25684 |
Ensembl Gene: | ENSRNOG00000032436.2 |
Ensembl Protein: | ENSRNOP00000013852.4 |
Organism: | Rattus norvegicus |
Taxa ID: | 10116 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSRNOT00000013852.4 | ENSRNOP00000013852.4 |
UniProt | Q6AXW2, Q6AXW2_RAT | |
GeneBank | BC079290, CH473954, AC096430 | , EDL77792.1, AAH79290.1 |
RefSeq | NM_001011997.1 | NP_001011997.1 |
Entrez | 300838 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MALPFRKDLG DYKDLDEDEL LGKLSESELK QLETVLDDLD PENALLPAGF RQKNQTSKSA 60 61 TGPFDRERLL SYLEKEALEY KDREDYVPYT GEKKGKIFIP KQKPVQTFTE ETISLDPELE 120 121 EALTSASDTE LCDLAAILGM HSLIADTQFC DVLGSSNGDD QEHFPNVVKG EKILPVFDEP 180 181 PNPTNVEESL KRIRENDACL VEVNLNNIKN IPIPTLKDFA KTLETNTHVK HFSLAATRSN 240 241 DPVAAAFADM LKVNKTLKSL NMESNFITGT GVLALIDALK DNETLSELKI DNQRQQLGTS 300 301 VELEMAKMLE ENTNILKLGY QFTQQGPRTR AANAITKNND LVRKRRIEGD QQ 352 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCACTGC CGTTCCGGAA AGACTTGGGA GACTATAAGG ACCTGGATGA GGATGAGCTC 60 61 CTAGGCAAGC TGTCGGAGTC AGAGCTGAAA CAGCTCGAAA CTGTCCTGGA CGATCTTGAC 120 121 CCCGAGAATG CCCTTCTGCC TGCAGGGTTC CGGCAGAAGA ACCAGACATC AAAGTCCGCC 180 181 ACAGGACCCT TTGACAGAGA ACGGCTCCTT TCCTACTTAG AGAAGGAAGC ATTGGAGTAT 240 241 AAAGACCGGG AAGACTATGT ACCCTACACT GGAGAGAAGA AAGGGAAAAT TTTTATCCCC 300 301 AAGCAGAAGC CAGTGCAGAC TTTTACAGAA GAAACTATAT CCCTTGATCC AGAGTTAGAA 360 361 GAAGCCTTGA CAAGCGCTTC AGACACAGAA CTGTGTGACC TTGCAGCAAT TCTTGGGATG 420 421 CACAGCCTGA TTGCAGACAC ACAGTTCTGT GACGTGCTGG GAAGTAGTAA CGGTGACGAC 480 481 CAAGAACATT TTCCGAATGT GGTTAAAGGG GAAAAGATTC TTCCAGTGTT TGATGAGCCA 540 541 CCAAATCCAA CCAACGTTGA AGAGAGTTTA AAGAGAATTA GGGAGAACGA TGCCTGTCTT 600 601 GTTGAAGTTA ATTTGAATAA TATAAAAAAT ATCCCAATTC CAACTCTAAA AGATTTTGCG 660 661 AAGACTTTGG AAACCAACAC ACATGTGAAG CATTTCAGTC TTGCAGCCAC CAGGAGCAAT 720 721 GACCCCGTGG CTGCTGCTTT TGCAGATATG CTGAAAGTGA ACAAAACTTT GAAGAGCTTA 780 781 AATATGGAGT CCAACTTCAT CACAGGCACT GGGGTTTTAG CACTGATTGA TGCTTTGAAA 840 841 GATAATGAGA CCCTATCAGA GCTCAAGATT GACAATCAGA GACAGCAGTT GGGCACCTCT 900 901 GTAGAATTAG AAATGGCCAA GATGCTCGAG GAAAACACAA ATATCCTTAA ACTTGGATAC 960 961 CAGTTCACGC AGCAGGGACC CCGAACCAGG GCAGCCAATG CTATAACAAA GAACAATGAC 1020 1021 TTAGTGCGCA AGAGGCGGAT TGAGGGAGAC CAGCAGTAA 1059 |
▼ ANNOTATION
Physicochemical | ||||
Compute pI/Mw | AAindex |
Function | ||||
PIRSF |
Localization | ||||
COMPARTMENTS |
Expression | ||||
ArrayExpress | TISSUES |
Element | ||||
miRWalk | RAID | microRNA.org |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Mum-3863 | Mus musculus | 94.89 | 0.0 | 615 |
LLPS-Bot-1281 | Bos taurus | 91.53 | 0.0 | 580 |
LLPS-Aon-3677 | Aotus nancymaae | 91.48 | 0.0 | 607 |
LLPS-Ova-3062 | Ovis aries | 91.22 | 0.0 | 605 |
LLPS-Otg-0519 | Otolemur garnettii | 90.93 | 0.0 | 601 |
LLPS-Mal-0440 | Mandrillus leucophaeus | 90.91 | 0.0 | 602 |
LLPS-Cea-2990 | Cercocebus atys | 90.91 | 0.0 | 602 |
LLPS-Maf-4496 | Macaca fascicularis | 90.91 | 0.0 | 605 |
LLPS-Chs-3895 | Chlorocebus sabaeus | 90.91 | 0.0 | 601 |
LLPS-Mam-3057 | Macaca mulatta | 90.91 | 0.0 | 605 |
LLPS-Poa-3770 | Pongo abelii | 90.91 | 0.0 | 603 |
LLPS-Rhb-0509 | Rhinopithecus bieti | 90.91 | 0.0 | 603 |
LLPS-Pat-2214 | Pan troglodytes | 90.91 | 0.0 | 603 |
LLPS-Pap-2155 | Pan paniscus | 90.91 | 0.0 | 603 |
LLPS-Paa-3486 | Papio anubis | 90.88 | 0.0 | 600 |
LLPS-Gog-1281 | Gorilla gorilla | 90.62 | 0.0 | 602 |
LLPS-Nol-3393 | Nomascus leucogenys | 90.62 | 0.0 | 602 |
LLPS-Orc-4287 | Oryctolagus cuniculus | 90.62 | 0.0 | 600 |
LLPS-Man-1231 | Macaca nemestrina | 90.62 | 0.0 | 604 |
LLPS-Hos-0344 | Homo sapiens | 90.34 | 0.0 | 599 |
LLPS-Sus-3213 | Sus scrofa | 90.28 | 0.0 | 600 |
LLPS-Eqc-1809 | Equus caballus | 90.12 | 0.0 | 584 |
LLPS-Fud-3428 | Fukomys damarensis | 90.06 | 0.0 | 602 |
LLPS-Caj-4019 | Callithrix jacchus | 90.06 | 0.0 | 597 |
LLPS-Caf-0247 | Canis familiaris | 90.06 | 0.0 | 598 |
LLPS-Mup-1081 | Mustela putorius furo | 90.03 | 0.0 | 598 |
LLPS-Cas-1404 | Carlito syrichta | 89.77 | 0.0 | 598 |
LLPS-Aim-4006 | Ailuropoda melanoleuca | 89.49 | 0.0 | 596 |
LLPS-Myl-3167 | Myotis lucifugus | 89.49 | 0.0 | 593 |
LLPS-Fec-2364 | Felis catus | 89.49 | 0.0 | 596 |
LLPS-Cap-2712 | Cavia porcellus | 89.46 | 0.0 | 596 |
LLPS-Ict-0410 | Ictidomys tridecemlineatus | 89.2 | 0.0 | 594 |
LLPS-Urm-1437 | Ursus maritimus | 89.2 | 0.0 | 598 |
LLPS-Dio-2199 | Dipodomys ordii | 88.92 | 0.0 | 583 |
LLPS-Loa-3129 | Loxodonta africana | 87.75 | 0.0 | 578 |
LLPS-Mod-3002 | Monodelphis domestica | 85.67 | 0.0 | 552 |
LLPS-Ora-3540 | Ornithorhynchus anatinus | 85.19 | 0.0 | 566 |
LLPS-Sah-4099 | Sarcophilus harrisii | 84.38 | 0.0 | 561 |
LLPS-Fia-2323 | Ficedula albicollis | 82.57 | 0.0 | 546 |
LLPS-Anp-0490 | Anas platyrhynchos | 82.39 | 0.0 | 550 |
LLPS-Tag-1726 | Taeniopygia guttata | 82.29 | 0.0 | 544 |
LLPS-Pes-1644 | Pelodiscus sinensis | 81.82 | 0.0 | 527 |
LLPS-Gaga-3816 | Gallus gallus | 80.4 | 0.0 | 540 |
LLPS-Anc-2282 | Anolis carolinensis | 80.26 | 0.0 | 520 |
LLPS-Meg-1598 | Meleagris gallopavo | 79.88 | 0.0 | 513 |
LLPS-Mea-3040 | Mesocricetus auratus | 79.13 | 4e-165 | 472 |
LLPS-Lac-3219 | Latimeria chalumnae | 76.7 | 0.0 | 516 |
LLPS-Scf-2555 | Scleropages formosus | 74.2 | 3e-168 | 480 |
LLPS-Orn-0050 | Oreochromis niloticus | 73.5 | 4e-175 | 498 |
LLPS-Pof-0038 | Poecilia formosa | 72.64 | 2e-170 | 486 |
LLPS-Ten-1487 | Tetraodon nigroviridis | 72.24 | 9e-171 | 487 |
LLPS-Xim-0821 | Xiphophorus maculatus | 72.08 | 7e-163 | 467 |
LLPS-Gaa-0013 | Gasterosteus aculeatus | 71.79 | 1e-169 | 484 |
LLPS-Xet-2968 | Xenopus tropicalis | 71.38 | 2e-164 | 471 |
LLPS-Tar-0934 | Takifugu rubripes | 70.35 | 1e-154 | 446 |
LLPS-Scm-2014 | Scophthalmus maximus | 70.35 | 7e-166 | 474 |
LLPS-Orl-1855 | Oryzias latipes | 70.13 | 2e-157 | 456 |
LLPS-Cis-1881 | Ciona savignyi | 53.02 | 2e-109 | 331 |
LLPS-Cii-0839 | Ciona intestinalis | 52.4 | 8e-108 | 327 |