LLPS-Pytr-0955
erb1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1 |
Gene Name: | erb1, PTRG_00503 |
Ensembl Gene: | PTRG_00503 |
Ensembl Protein: | EDU39941 |
Organism: | Pyrenophora triticirepentis |
Taxa ID: | 426418 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Chromatin, Nucleolus, P-body, Stress granule, Others | Predicted from orthologs | (View) |
▼ FUNCTION
Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | EDU39941 | EDU39941 |
UniProt | B2VR76, ERB1_PYRTR | |
GeneBank | DS231615 | EDU39941.1 |
RefSeq | XM_001930801.1 | XP_001930836.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSVNPRKRKV VTRPAPEPSD SEGELGDGLL EGILSHSEDD SDNSREEEVD TDASSVIEGL 60 61 SDEDEEEDED SDSEQIRTEM RNLNTSDGPL RKKKGVPTHD MDLDTAVTEE LEDDEDLKPN 120 121 YTVTTDAHGN TRYIYKEIDP VYESDDSDVE ATNTIGNIDL KYYDEYPHIG YDINGKKIMR 180 181 PAKGEALDAL LDSIDIPKGW TGLTDPQTGK PLNLSEEELD VLKRLTRNEV VEDGYDPYPE 240 241 MVAYFSGKQE IMPLSAAPEP KRRFIPSKHE AKRVMKLVKA IREGRIQPYR APEEQEEEQD 300 301 AFNFDVWADE KPRPDNSMHI PAPKLPPPGY EASYHPPPEY LPDKAEEQAW LEADEEDRER 360 361 EFLPKNYDAL RKVPGYETFV KERFERSLDL YLAPRIRRNR LNIDPESLLP KLPNPEDLKP 420 421 FPTTCAAIFR GQEGRVRCVS IDPNGIFVAS GGDDGYVRIW ELLTGRQVWN AKLSDEEAVD 480 481 AVQWRPKKDA SVVAAACGEN VFLIVPFTLL SPDVEQASRE VLDAGWGYAT SKPSTSSNGE 540 541 APKQAPGKWS RPGARLENKG VLVQVEVRSA VKIVNWHRRG DYFATVSPRG QSTAVAIHTV 600 601 SKHLTQLPFR RLKGIAQTAQ FHPSKAIFFV ATRNTIRSYD LAKQELVKIL QPGAKWISSI 660 661 DVHPGGDNLI VGTYDKRLLW HDLDLSNKPY KTLRFHKEAI RAVRFHQGGL PLFADTSDDG 720 721 TIQIFHGKVV GDLMENATIV PLKVLKGHKV RSRLGVMGLD WHPKEPWCVS AGADGTLRLW 780 781 S 781 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCTGTCA ATCCGCGCAA GAGGAAGGTA GTGACGCGCC CGGCGCCAGA GCCTAGTGAT 60 61 TCCGAAGGTG AATTAGGCGA CGGCTTGCTT GAGGGCATTC TGTCGCATTC CGAGGACGAT 120 121 TCAGACAACA GCCGAGAAGA AGAAGTCGAT ACGGATGCAA GCAGTGTAAT TGAGGGCCTG 180 181 TCTGACGAAG ACGAAGAGGA GGATGAGGAC AGTGACTCAG AGCAGATACG CACAGAAATG 240 241 CGCAACCTCA ACACGTCAGA TGGTCCGCTG CGCAAGAAGA AAGGCGTCCC GACACATGAC 300 301 ATGGACCTCG ACACTGCTGT AACAGAGGAG CTAGAGGATG ACGAGGACCT CAAGCCCAAC 360 361 TACACTGTTA CTACCGACGC GCATGGCAAT ACTCGATATA TCTACAAGGA GATCGACCCA 420 421 GTCTACGAGT CCGACGATTC AGACGTTGAA GCTACGAATA CCATCGGCAA CATAGATCTC 480 481 AAGTACTATG ACGAATACCC GCATATTGGC TATGACATCA ATGGCAAGAA GATTATGCGC 540 541 CCGGCCAAGG GAGAGGCTTT GGATGCGCTG TTGGACAGCA TTGATATACC CAAGGGCTGG 600 601 ACCGGTCTGA CCGATCCGCA GACGGGCAAG CCACTGAACC TGTCAGAAGA GGAACTGGAT 660 661 GTGCTCAAGA GGCTCACAAG GAATGAGGTG GTCGAGGATG GATACGATCC GTACCCCGAG 720 721 ATGGTGGCCT ACTTCTCTGG CAAGCAGGAG ATCATGCCAC TGAGCGCTGC CCCAGAACCC 780 781 AAGCGACGAT TTATTCCTTC CAAACATGAG GCCAAACGCG TCATGAAACT CGTAAAGGCA 840 841 ATCAGGGAAG GTCGCATCCA GCCATACAGA GCGCCTGAGG AACAGGAAGA AGAGCAGGAT 900 901 GCTTTCAACT TCGATGTATG GGCAGATGAG AAGCCACGAC CAGACAACTC GATGCACATC 960 961 CCCGCACCTA AGCTACCACC GCCAGGCTAC GAAGCAAGCT ACCACCCGCC GCCTGAGTAT 1020 1021 CTACCAGACA AGGCTGAAGA GCAAGCTTGG TTGGAAGCAG ATGAGGAGGA TCGGGAGAGG 1080 1081 GAATTCTTAC CCAAGAACTA TGATGCTCTG CGAAAGGTTC CTGGCTACGA AACATTCGTC 1140 1141 AAGGAACGTT TTGAGCGGAG TCTGGATCTT TACCTGGCTC CTCGTATACG AAGAAACCGA 1200 1201 CTTAACATCG ACCCTGAATC ACTACTACCC AAGCTACCGA ACCCTGAAGA CCTGAAGCCT 1260 1261 TTCCCTACAA CTTGCGCGGC CATCTTCCGC GGACAAGAAG GACGTGTCCG TTGTGTATCA 1320 1321 ATTGATCCAA ATGGCATATT CGTTGCAAGT GGAGGAGATG ATGGTTACGT GAGAATTTGG 1380 1381 GAGCTCCTGA CCGGTCGACA AGTGTGGAAT GCGAAGCTGT CCGATGAGGA AGCCGTTGAT 1440 1441 GCAGTACAGT GGAGGCCCAA GAAGGATGCA TCTGTTGTTG CCGCTGCTTG CGGTGAGAAC 1500 1501 GTCTTCTTGA TAGTTCCTTT CACACTCTTG TCACCGGATG TGGAGCAAGC CAGTCGCGAG 1560 1561 GTCCTTGATG CAGGTTGGGG TTACGCAACG TCCAAACCAT CGACGAGCTC AAACGGTGAG 1620 1621 GCTCCCAAAC AAGCACCAGG AAAATGGAGC CGCCCAGGAG CTCGTCTTGA GAACAAAGGC 1680 1681 GTCCTTGTCC AGGTTGAAGT CAGATCAGCT GTCAAGATTG TCAACTGGCA CAGGAGGGGA 1740 1741 GACTACTTTG CCACAGTATC GCCTCGCGGT CAGAGTACAG CAGTGGCCAT TCATACTGTC 1800 1801 TCAAAACACC TCACTCAACT TCCCTTCCGC CGTCTCAAGG GTATCGCACA GACAGCACAG 1860 1861 TTCCATCCCT CCAAAGCCAT TTTCTTCGTT GCTACTCGCA ACACCATCCG CAGCTACGAT 1920 1921 CTCGCGAAGC AAGAGCTTGT CAAGATACTG CAACCAGGTG CCAAATGGAT TTCGTCGATT 1980 1981 GACGTGCATC CCGGGGGCGA CAACCTCATT GTCGGTACCT ACGACAAGCG TCTCCTATGG 2040 2041 CACGATCTCG ACCTTTCGAA CAAGCCCTAC AAAACGCTGC GTTTCCACAA GGAAGCCATT 2100 2101 CGCGCTGTTC GCTTCCATCA AGGTGGTCTG CCACTCTTTG CCGATACTTC AGATGATGGC 2160 2161 ACAATACAGA TTTTCCATGG AAAGGTAGTG GGAGACCTTA TGGAGAACGC TACCATCGTC 2220 2221 CCATTGAAGG TACTGAAGGG GCACAAGGTC AGGAGCAGGC TGGGTGTCAT GGGTCTGGAC 2280 2281 TGGCATCCCA AGGAGCCATG GTGCGTGTCG GCTGGTGCAG ATGGCACGTT GAGGTTGTGG 2340 2341 AGTTAG 2346 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nucleolus | |
Cellular Component | Nucleoplasm | |
Cellular Component | Preribosome, large subunit precursor | |
Molecular Function | Ribonucleoprotein complex binding | |
Biological Process | Maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
Biological Process | Maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Pyt-0617 | Pyrenophora teres | 98.46 | 0.0 | 1459 |
LLPS-Lem-0485 | Leptosphaeria maculans | 86.2 | 0.0 | 1320 |
LLPS-Phn-0348 | Phaeosphaeria nodorum | 78.95 | 0.0 | 1198 |
LLPS-Blg-0509 | Blumeria graminis | 68.66 | 0.0 | 1005 |
LLPS-Mao-0593 | Magnaporthe oryzae | 68.2 | 0.0 | 937 |
LLPS-Fus-0370 | Fusarium solani | 67.31 | 0.0 | 949 |
LLPS-Coo-0071 | Colletotrichum orbiculare | 66.96 | 0.0 | 952 |
LLPS-Fuo-0194 | Fusarium oxysporum | 66.57 | 0.0 | 938 |
LLPS-Trr-0313 | Trichoderma reesei | 66.52 | 0.0 | 903 |
LLPS-Trv-0732 | Trichoderma virens | 66.47 | 0.0 | 935 |
LLPS-Fuv-0322 | Fusarium verticillioides | 66.42 | 0.0 | 934 |
LLPS-Gag-0637 | Gaeumannomyces graminis | 66.33 | 0.0 | 961 |
LLPS-Ved-0798 | Verticillium dahliae | 66.27 | 0.0 | 947 |
LLPS-Cogr-0529 | Colletotrichum graminicola | 66.22 | 0.0 | 909 |
LLPS-Nec-0126 | Neurospora crassa | 66.17 | 0.0 | 942 |
LLPS-Map-0215 | Magnaporthe poae | 66.07 | 0.0 | 946 |
LLPS-Aso-0573 | Aspergillus oryzae | 65.75 | 0.0 | 946 |
LLPS-Asf-0344 | Aspergillus flavus | 65.75 | 0.0 | 945 |
LLPS-Asfu-0131 | Aspergillus fumigatus | 65.2 | 0.0 | 913 |
LLPS-Asn-0438 | Aspergillus nidulans | 65.09 | 0.0 | 929 |
LLPS-Ast-0088 | Aspergillus terreus | 64.88 | 0.0 | 962 |
LLPS-Asc-0072 | Aspergillus clavatus | 64.79 | 0.0 | 928 |
LLPS-Tum-0151 | Tuber melanosporum | 64.41 | 0.0 | 881 |
LLPS-Asni-0041 | Aspergillus niger | 64.38 | 0.0 | 951 |
LLPS-Zyt-0834 | Zymoseptoria tritici | 63.93 | 0.0 | 880 |
LLPS-Beb-0697 | Beauveria bassiana | 63.52 | 0.0 | 922 |
LLPS-Nef-0675 | Neosartorya fischeri | 62.96 | 0.0 | 909 |
LLPS-Dos-0025 | Dothistroma septosporum | 61.29 | 0.0 | 860 |
LLPS-Cog-0045 | Colletotrichum gloeosporioides | 61.04 | 0.0 | 809 |
LLPS-Asg-0504 | Ashbya gossypii | 52.23 | 0.0 | 736 |
LLPS-Yal-0071 | Yarrowia lipolytica | 51.33 | 0.0 | 752 |
LLPS-Sac-0288 | Saccharomyces cerevisiae | 51.18 | 0.0 | 733 |
LLPS-Ova-1203 | Ovis aries | 50.28 | 3e-50 | 190 |
LLPS-Orm-0111 | Oryza meridionalis | 49.65 | 1e-35 | 149 |
LLPS-Mua-0673 | Musa acuminata | 49.47 | 2e-48 | 188 |
LLPS-Mel-0776 | Melampsora laricipopulina | 49.4 | 0.0 | 638 |
LLPS-Pug-0237 | Puccinia graminis | 49.24 | 0.0 | 631 |
LLPS-Abg-0018 | Absidia glauca | 48.89 | 0.0 | 647 |
LLPS-Crn-0111 | Cryptococcus neoformans | 48.77 | 0.0 | 639 |
LLPS-Put-0186 | Puccinia triticina | 48.76 | 0.0 | 609 |
LLPS-Kop-0478 | Komagataella pastoris | 48.75 | 0.0 | 696 |
LLPS-Anc-1155 | Anolis carolinensis | 48.26 | 2e-49 | 177 |
LLPS-Scp-0316 | Schizosaccharomyces pombe | 47.31 | 0.0 | 597 |
LLPS-Miv-0001 | Microbotryum violaceum | 46.23 | 0.0 | 600 |
LLPS-Scc-1080 | Schizosaccharomyces cryophilus | 45.98 | 0.0 | 561 |
LLPS-Scj-0366 | Schizosaccharomyces japonicus | 45.54 | 0.0 | 581 |
LLPS-Spr-0071 | Sporisorium reilianum | 44.54 | 0.0 | 575 |
LLPS-Usm-0734 | Ustilago maydis | 44.36 | 0.0 | 574 |
LLPS-Icp-0200 | Ictalurus punctatus | 44.27 | 0.0 | 548 |
LLPS-Orl-2069 | Oryzias latipes | 44.05 | 1e-176 | 533 |
LLPS-Sah-0700 | Sarcophilus harrisii | 43.92 | 0.0 | 547 |
LLPS-Leo-0149 | Lepisosteus oculatus | 43.6 | 0.0 | 545 |
LLPS-Cii-0032 | Ciona intestinalis | 43.42 | 0.0 | 551 |
LLPS-Cas-0761 | Carlito syrichta | 43.41 | 4e-180 | 541 |
LLPS-Dar-1279 | Danio rerio | 43.34 | 7e-178 | 537 |
LLPS-Scf-0343 | Scleropages formosus | 43.26 | 2e-169 | 513 |
LLPS-Ten-1770 | Tetraodon nigroviridis | 43.26 | 1e-179 | 538 |
LLPS-Orn-0842 | Oreochromis niloticus | 43.12 | 4e-179 | 538 |
LLPS-Mod-1096 | Monodelphis domestica | 43.1 | 0.0 | 549 |
LLPS-Sot-0126 | Solanum tuberosum | 43.03 | 1e-159 | 489 |
LLPS-Via-0498 | Vigna angularis | 43.02 | 3e-150 | 463 |
LLPS-Scm-0952 | Scophthalmus maximus | 42.99 | 2e-178 | 538 |
LLPS-Ran-0451 | Rattus norvegicus | 42.97 | 5e-179 | 538 |
LLPS-Mum-0179 | Mus musculus | 42.97 | 3e-179 | 539 |
LLPS-Pof-0278 | Poecilia formosa | 42.97 | 1e-179 | 542 |
LLPS-Sus-0053 | Sus scrofa | 42.95 | 6e-174 | 526 |
LLPS-Glm-0562 | Glycine max | 42.88 | 2e-164 | 500 |
LLPS-Xim-2117 | Xiphophorus maculatus | 42.79 | 0.0 | 544 |
LLPS-Myl-1836 | Myotis lucifugus | 42.79 | 9e-177 | 532 |
LLPS-Chs-0111 | Chlorocebus sabaeus | 42.79 | 5e-176 | 531 |
LLPS-Lac-0552 | Latimeria chalumnae | 42.79 | 3e-178 | 538 |
LLPS-Gaga-1391 | Gallus gallus | 42.65 | 1e-171 | 531 |
LLPS-Paa-0119 | Papio anubis | 42.64 | 2e-175 | 530 |
LLPS-Mal-0376 | Mandrillus leucophaeus | 42.64 | 8e-176 | 530 |
LLPS-Maf-1263 | Macaca fascicularis | 42.64 | 3e-175 | 528 |
LLPS-Cea-0238 | Cercocebus atys | 42.64 | 3e-175 | 529 |
LLPS-Gog-0610 | Gorilla gorilla | 42.64 | 4e-176 | 530 |
LLPS-Mam-0074 | Macaca mulatta | 42.64 | 1e-175 | 530 |
LLPS-Hos-0069 | Homo sapiens | 42.64 | 1e-175 | 530 |
LLPS-Poa-0854 | Pongo abelii | 42.59 | 2e-155 | 472 |
LLPS-Bot-0120 | Bos taurus | 42.48 | 8e-176 | 531 |
LLPS-Fud-0461 | Fukomys damarensis | 42.48 | 8e-176 | 529 |
LLPS-Eqc-1593 | Equus caballus | 42.48 | 2e-173 | 527 |
LLPS-Cap-1563 | Cavia porcellus | 42.48 | 6e-176 | 531 |
LLPS-Pat-1537 | Pan troglodytes | 42.48 | 6e-175 | 528 |
LLPS-Pap-3164 | Pan paniscus | 42.48 | 3e-175 | 528 |
LLPS-Fia-0687 | Ficedula albicollis | 42.44 | 3e-145 | 445 |
LLPS-Meg-0895 | Meleagris gallopavo | 42.41 | 2e-70 | 239 |
LLPS-Aon-2768 | Aotus nancymaae | 42.39 | 4e-177 | 534 |
LLPS-Prp-0217 | Prunus persica | 42.35 | 1e-157 | 482 |
LLPS-Gaa-0654 | Gasterosteus aculeatus | 42.26 | 6e-177 | 532 |
LLPS-Otg-0440 | Otolemur garnettii | 42.17 | 4e-175 | 528 |
LLPS-Mea-0674 | Mesocricetus auratus | 42.1 | 2e-163 | 497 |
LLPS-Mup-1714 | Mustela putorius furo | 42.02 | 2e-173 | 524 |
LLPS-Sem-0312 | Selaginella moellendorffii | 42.02 | 3e-153 | 472 |
LLPS-Dio-0091 | Dipodomys ordii | 41.86 | 3e-170 | 516 |
LLPS-Fec-0154 | Felis catus | 41.86 | 1e-171 | 520 |
LLPS-Ict-0001 | Ictidomys tridecemlineatus | 41.82 | 2e-173 | 524 |
LLPS-Rhb-0632 | Rhinopithecus bieti | 41.82 | 9e-173 | 523 |
LLPS-Drm-1112 | Drosophila melanogaster | 41.76 | 2e-170 | 518 |
LLPS-Thc-0467 | Theobroma cacao | 41.76 | 1e-160 | 489 |
LLPS-Sei-0740 | Setaria italica | 41.73 | 8e-161 | 490 |
LLPS-Arl-0080 | Arabidopsis lyrata | 41.63 | 7e-157 | 482 |
LLPS-Mae-1859 | Manihot esculenta | 41.62 | 1e-157 | 482 |
LLPS-Ori-0781 | Oryza indica | 41.54 | 7e-159 | 484 |
LLPS-Org-0684 | Oryza glaberrima | 41.54 | 5e-159 | 485 |
LLPS-Orbr-0536 | Oryza brachyantha | 41.51 | 3e-160 | 488 |
LLPS-Caj-0121 | Callithrix jacchus | 41.41 | 5e-156 | 481 |
LLPS-Ors-0325 | Oryza sativa | 41.38 | 2e-158 | 483 |
LLPS-Gor-0235 | Gossypium raimondii | 41.36 | 1e-159 | 486 |
LLPS-Art-0057 | Arabidopsis thaliana | 41.28 | 6e-156 | 479 |
LLPS-Brn-1650 | Brassica napus | 41.14 | 6e-157 | 482 |
LLPS-Phv-0738 | Phaseolus vulgaris | 41.13 | 2e-165 | 504 |
LLPS-Cis-0212 | Ciona savignyi | 41.11 | 7e-164 | 496 |
LLPS-Chr-0631 | Chlamydomonas reinhardtii | 40.98 | 2e-153 | 474 |
LLPS-Cus-0583 | Cucumis sativus | 40.97 | 2e-146 | 451 |
LLPS-Brr-0744 | Brassica rapa | 40.92 | 2e-152 | 484 |
LLPS-Coc-0078 | Corchorus capsularis | 40.74 | 3e-145 | 449 |
LLPS-Pot-0036 | Populus trichocarpa | 40.71 | 2e-160 | 491 |
LLPS-Vir-0528 | Vigna radiata | 40.55 | 3e-155 | 476 |
LLPS-Bro-0109 | Brassica oleracea | 40.52 | 2e-156 | 480 |
LLPS-Anp-0830 | Anas platyrhynchos | 40.48 | 4e-138 | 426 |
LLPS-Viv-0377 | Vitis vinifera | 40.42 | 1e-134 | 422 |
LLPS-Sob-0165 | Sorghum bicolor | 40.38 | 1e-154 | 474 |
LLPS-Brd-0265 | Brachypodium distachyon | 40.31 | 1e-156 | 479 |
LLPS-Tra-0100 | Triticum aestivum | 40.22 | 7e-154 | 474 |
LLPS-Hea-1086 | Helianthus annuus | 40.21 | 2e-152 | 469 |
LLPS-Asm-0829 | Astyanax mexicanus | 40.13 | 4e-136 | 424 |
LLPS-Orgl-0224 | Oryza glumaepatula | 40.0 | 5e-144 | 445 |
LLPS-Hov-0349 | Hordeum vulgare | 39.84 | 9e-151 | 464 |
LLPS-Met-0563 | Medicago truncatula | 39.48 | 2e-150 | 466 |
LLPS-Php-0531 | Physcomitrella patens | 39.41 | 8e-152 | 469 |
LLPS-Lep-0058 | Leersia perrieri | 39.35 | 3e-142 | 441 |
LLPS-Orr-1407 | Oryza rufipogon | 39.23 | 7e-143 | 442 |
LLPS-Orp-0527 | Oryza punctata | 39.2 | 5e-143 | 442 |
LLPS-Orb-0118 | Oryza barthii | 39.14 | 2e-143 | 443 |
LLPS-Ere-0105 | Erinaceus europaeus | 39.13 | 4e-122 | 384 |
LLPS-Caf-1400 | Canis familiaris | 38.91 | 1e-151 | 467 |
LLPS-Dac-0380 | Daucus carota | 38.9 | 2e-147 | 457 |
LLPS-Cae-0298 | Caenorhabditis elegans | 38.86 | 5e-151 | 464 |
LLPS-Chc-0335 | Chondrus crispus | 38.84 | 1e-153 | 474 |
LLPS-Sol-0658 | Solanum lycopersicum | 38.8 | 3e-137 | 439 |
LLPS-Orni-0787 | Oryza nivara | 38.62 | 1e-138 | 432 |
LLPS-Nia-0748 | Nicotiana attenuata | 38.5 | 6e-88 | 295 |
LLPS-Tru-0248 | Triticum urartu | 37.68 | 8e-122 | 391 |
LLPS-Amt-0110 | Amborella trichopoda | 37.44 | 2e-82 | 280 |
LLPS-Zem-0343 | Zea mays | 37.2 | 4e-142 | 443 |
LLPS-Man-1924 | Macaca nemestrina | 36.53 | 1e-127 | 404 |
LLPS-Gas-0003 | Galdieria sulphuraria | 35.29 | 3e-121 | 386 |
LLPS-Cym-0218 | Cyanidioschyzon merolae | 35.0 | 1e-136 | 427 |
LLPS-Osl-0417 | Ostreococcus lucimarinus | 30.03 | 6e-77 | 266 |