LLPS-Pot-0516
POPTR_016G003800
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | POPTR_016G003800 |
| Ensembl Gene: | POPTR_016G003800v3 |
| Ensembl Protein: | PNS97134 |
| Organism: | Populus trichocarpa |
| Taxa ID: | 3694 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nuclear speckle, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | PNS97134 | PNS97134 |
| Ensembl | PNS97133 | PNS97133 |
| Ensembl | PNS97132 | PNS97132 |
| UniProt | A0A2K1X8N1, A0A2K1X8N1_POPTR | |
| GeneBank | CM009305 | RQP01100.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MYGRAGLERF KKAQSTEPFS VPVNSAPKTT TQPAVKTVSQ PSVQYSQSKT QSQFRDQPYV 60 61 AQKPAAPEAG PLLGHTQPVT QVGGGQSTWQ PPDWAIEPRP GVYYLEVLKD GEVLDRISLD 120 121 RRRHIFGRQI HTCDFVLDHQ SVSRQHAAVI PHKNGSIFVI DLGSAHGTFV ANERLTKDTP 180 181 VELEAGQSLR FAASTRTYIL RKNDAALFPR PPPPSEINLP PPPDPSDEEA VVAYNTFLNR 240 241 YGLTKPDQPT KSSESSGSLS RRHDDQQLGR AAKRIKKTRV AFRDQVGGEL VQVVGFSDGA 300 301 DVETEPGPIG VKEGSLVGKY ESLVQVTVIP KGKEQFSAKE HNASQKGVTS RLQEVLNKVK 360 361 TTTKSGMYDD LYGESFAGKV GSSWAYSSDS SVGNLASPTK DGQGNAIGSL SGKPENNPSA 420 421 YDDNDDDDLF GD 432 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTATGGTA GAGCAGGTCT TGAGCGTTTT AAAAAAGCTC AATCTACTGA ACCCTTCTCA 60 61 GTCCCTGTCA ATTCTGCTCC CAAGACCACT ACCCAACCTG CTGTTAAAAC TGTTTCGCAA 120 121 CCCTCAGTTC AGTATTCACA ATCTAAGACA CAATCCCAGT TCCGAGACCA ACCTTATGTT 180 181 GCTCAAAAAC CTGCTGCGCC GGAGGCCGGA CCATTGCTAG GGCATACACA GCCGGTGACG 240 241 CAGGTTGGAG GAGGGCAGTC AACTTGGCAG CCACCAGACT GGGCGATTGA GCCTCGTCCT 300 301 GGAGTTTATT ATCTTGAGGT TTTGAAGGAC GGAGAGGTTC TTGATCGCAT TAGTTTGGAT 360 361 AGGCGGAGGC ATATCTTTGG GAGGCAAATC CACACTTGTG ATTTTGTGCT TGATCATCAG 420 421 TCCGTTTCAC GCCAACATGC TGCTGTCATT CCTCACAAGA ATGGAAGCAT TTTTGTAATT 480 481 GATTTGGGGT CTGCACATGG TACTTTTGTG GCTAATGAAC GTTTGACTAA AGATACCCCT 540 541 GTTGAACTGG AAGCGGGGCA GTCTTTGCGG TTTGCTGCAT CAACACGAAC TTATATCTTG 600 601 AGAAAGAATG ATGCAGCTCT TTTTCCTCGT CCTCCACCTC CCTCAGAAAT TAACCTACCA 660 661 CCCCCTCCTG ATCCATCTGA TGAAGAAGCT GTTGTAGCAT ATAATACTTT TCTGAATCGT 720 721 TATGGTCTAA CTAAGCCTGA TCAACCAACT AAATCGAGTG AATCAAGTGG CTCATTAAGC 780 781 AGAAGACATG ATGACCAGCA GTTGGGGAGA GCTGCTAAGA GAATAAAAAA GACAAGGGTT 840 841 GCTTTCAGGG ATCAAGTTGG GGGTGAGCTG GTTCAAGTTG TTGGTTTTTC AGATGGTGCA 900 901 GATGTAGAAA CAGAGCCTGG TCCAATAGGT GTAAAAGAAG GAAGCCTTGT TGGAAAATAC 960 961 GAGTCTCTTG TACAGGTTAC AGTAATACCC AAAGGTAAGG AACAATTCTC AGCAAAGGAA 1020 1021 CATAATGCTT CCCAAAAAGG AGTGACTAGT AGATTACAAG AAGTCTTGAA TAAGGTCAAA 1080 1081 ACTACTACAA AAAGTGGGAT GTATGATGAT CTTTATGGAG AATCATTTGC TGGAAAAGTG 1140 1141 GGCTCTTCCT GGGCATATTC TTCTGATAGT TCTGTTGGTA ATCTAGCTTC TCCAACAAAA 1200 1201 GATGGCCAGG GGAATGCTAT TGGTTCTTTG AGTGGAAAAC CTGAAAATAA CCCGAGCGCT 1260 1261 TATGATGACA ACGATGATGA TGATTTATTT GGTGACTAG 1299 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mae-0656 | Manihot esculenta | 80.56 | 0.0 | 638 |
| LLPS-Vir-1331 | Vigna radiata | 74.75 | 0.0 | 522 |
| LLPS-Cus-0693 | Cucumis sativus | 73.27 | 0.0 | 548 |
| LLPS-Viv-2065 | Vitis vinifera | 73.06 | 7e-179 | 514 |
| LLPS-Glm-0516 | Glycine max | 72.27 | 0.0 | 536 |
| LLPS-Via-0413 | Vigna angularis | 72.27 | 0.0 | 523 |
| LLPS-Phv-0776 | Phaseolus vulgaris | 72.04 | 0.0 | 541 |
| LLPS-Thc-0342 | Theobroma cacao | 71.13 | 0.0 | 538 |
| LLPS-Coc-1883 | Corchorus capsularis | 69.27 | 0.0 | 526 |
| LLPS-Met-1005 | Medicago truncatula | 68.4 | 0.0 | 531 |
| LLPS-Sei-1183 | Setaria italica | 68.29 | 3e-157 | 458 |
| LLPS-Prp-0639 | Prunus persica | 67.67 | 2e-171 | 494 |
| LLPS-Nia-1198 | Nicotiana attenuata | 67.51 | 0.0 | 519 |
| LLPS-Tra-1346 | Triticum aestivum | 66.75 | 8e-165 | 478 |
| LLPS-Dac-1333 | Daucus carota | 66.44 | 0.0 | 540 |
| LLPS-Sob-0519 | Sorghum bicolor | 66.41 | 3e-160 | 466 |
| LLPS-Sot-0876 | Solanum tuberosum | 66.36 | 2e-177 | 510 |
| LLPS-Sol-2346 | Solanum lycopersicum | 65.9 | 2e-176 | 508 |
| LLPS-Mua-0438 | Musa acuminata | 65.82 | 6e-160 | 464 |
| LLPS-Brd-1003 | Brachypodium distachyon | 65.67 | 9e-163 | 473 |
| LLPS-Orbr-0485 | Oryza brachyantha | 65.66 | 7e-162 | 470 |
| LLPS-Amt-0891 | Amborella trichopoda | 65.59 | 7e-165 | 477 |
| LLPS-Zem-0427 | Zea mays | 65.34 | 7e-156 | 455 |
| LLPS-Hov-0090 | Hordeum vulgare | 65.24 | 4e-162 | 471 |
| LLPS-Lep-0611 | Leersia perrieri | 64.36 | 3e-154 | 457 |
| LLPS-Orp-1868 | Oryza punctata | 64.12 | 3e-157 | 459 |
| LLPS-Tru-1883 | Triticum urartu | 64.08 | 2e-158 | 462 |
| LLPS-Gor-0148 | Gossypium raimondii | 64.01 | 2e-163 | 474 |
| LLPS-Bro-0130 | Brassica oleracea | 63.61 | 1e-146 | 430 |
| LLPS-Brn-1916 | Brassica napus | 63.37 | 1e-145 | 427 |
| LLPS-Hea-1677 | Helianthus annuus | 63.1 | 9e-151 | 441 |
| LLPS-Art-2935 | Arabidopsis thaliana | 62.47 | 9e-147 | 430 |
| LLPS-Brr-0530 | Brassica rapa | 62.47 | 4e-144 | 423 |
| LLPS-Orb-0759 | Oryza barthii | 62.18 | 8e-163 | 473 |
| LLPS-Org-2019 | Oryza glaberrima | 62.18 | 8e-163 | 473 |
| LLPS-Orni-0142 | Oryza nivara | 61.95 | 3e-162 | 471 |
| LLPS-Ori-1391 | Oryza indica | 61.95 | 3e-162 | 471 |
| LLPS-Orgl-1441 | Oryza glumaepatula | 61.95 | 3e-162 | 471 |
| LLPS-Ors-0815 | Oryza sativa | 61.95 | 3e-162 | 471 |
| LLPS-Orr-1336 | Oryza rufipogon | 61.95 | 3e-162 | 471 |
| LLPS-Arl-0919 | Arabidopsis lyrata | 59.29 | 1e-138 | 413 |
| LLPS-Php-1582 | Physcomitrella patens | 52.64 | 7e-112 | 345 |
| LLPS-Orm-1829 | Oryza meridionalis | 44.16 | 6e-08 | 59.3 |
| LLPS-Leo-0069 | Lepisosteus oculatus | 41.59 | 8e-22 | 99.8 |
| LLPS-Orn-3105 | Oreochromis niloticus | 41.59 | 2e-22 | 101 |
| LLPS-Orl-3622 | Oryzias latipes | 40.83 | 2e-21 | 99.4 |
| LLPS-Ten-0370 | Tetraodon nigroviridis | 40.74 | 6e-20 | 92.0 |
| LLPS-Icp-4086 | Ictalurus punctatus | 40.71 | 2e-21 | 98.6 |
| LLPS-Dar-2661 | Danio rerio | 40.71 | 2e-21 | 98.6 |
| LLPS-Cea-0165 | Cercocebus atys | 40.68 | 5e-22 | 100 |
| LLPS-Drm-0272 | Drosophila melanogaster | 40.68 | 6e-22 | 100 |
| LLPS-Pap-0109 | Pan paniscus | 40.68 | 5e-22 | 100 |
| LLPS-Cap-4183 | Cavia porcellus | 40.68 | 7e-22 | 99.8 |
| LLPS-Poa-1733 | Pongo abelii | 40.68 | 5e-22 | 100 |
| LLPS-Ora-0023 | Ornithorhynchus anatinus | 40.34 | 5e-21 | 95.9 |
| LLPS-Sah-0739 | Sarcophilus harrisii | 40.2 | 3e-10 | 66.6 |
| LLPS-Meg-1412 | Meleagris gallopavo | 40.17 | 3e-20 | 95.1 |
| LLPS-Tar-1413 | Takifugu rubripes | 40.0 | 2e-22 | 101 |
| LLPS-Xim-1955 | Xiphophorus maculatus | 40.0 | 8e-19 | 91.7 |
| LLPS-Loa-1562 | Loxodonta africana | 40.0 | 6e-19 | 91.3 |
| LLPS-Anp-0786 | Anas platyrhynchos | 39.83 | 5e-20 | 94.4 |
| LLPS-Anc-0619 | Anolis carolinensis | 39.83 | 1e-20 | 96.3 |
| LLPS-Myl-3402 | Myotis lucifugus | 39.82 | 2e-19 | 93.2 |
| LLPS-Fia-3200 | Ficedula albicollis | 39.82 | 1e-19 | 93.6 |
| LLPS-Pes-1455 | Pelodiscus sinensis | 39.82 | 2e-19 | 92.8 |
| LLPS-Tag-0255 | Taeniopygia guttata | 39.82 | 2e-19 | 92.4 |
| LLPS-Asm-0867 | Astyanax mexicanus | 39.81 | 8e-19 | 91.3 |
| LLPS-Gaga-3338 | Gallus gallus | 39.67 | 4e-22 | 100 |
| LLPS-Chr-0154 | Chlamydomonas reinhardtii | 39.32 | 2e-12 | 73.6 |
| LLPS-Gaa-2818 | Gasterosteus aculeatus | 39.32 | 2e-20 | 95.9 |
| LLPS-Paa-1036 | Papio anubis | 39.2 | 5e-12 | 72.0 |
| LLPS-Mod-4264 | Monodelphis domestica | 39.2 | 9e-14 | 77.8 |
| LLPS-Scm-1842 | Scophthalmus maximus | 39.17 | 6e-21 | 97.1 |
| LLPS-Pof-0209 | Poecilia formosa | 39.17 | 4e-21 | 97.8 |
| LLPS-Caj-3445 | Callithrix jacchus | 38.58 | 5e-22 | 100 |
| LLPS-Fud-1651 | Fukomys damarensis | 38.58 | 5e-22 | 100 |
| LLPS-Gog-2064 | Gorilla gorilla | 38.58 | 5e-22 | 100 |
| LLPS-Aon-1114 | Aotus nancymaae | 38.58 | 5e-22 | 100 |
| LLPS-Sus-4098 | Sus scrofa | 38.58 | 5e-22 | 100 |
| LLPS-Chs-3065 | Chlorocebus sabaeus | 38.58 | 5e-22 | 100 |
| LLPS-Mea-1834 | Mesocricetus auratus | 38.58 | 5e-22 | 100 |
| LLPS-Maf-2335 | Macaca fascicularis | 38.58 | 5e-22 | 100 |
| LLPS-Mum-0458 | Mus musculus | 38.58 | 5e-22 | 100 |
| LLPS-Aim-0453 | Ailuropoda melanoleuca | 38.58 | 5e-22 | 100 |
| LLPS-Mup-3469 | Mustela putorius furo | 38.58 | 5e-22 | 100 |
| LLPS-Ova-3700 | Ovis aries | 38.58 | 5e-22 | 100 |
| LLPS-Mal-0309 | Mandrillus leucophaeus | 38.58 | 5e-22 | 100 |
| LLPS-Ere-0618 | Erinaceus europaeus | 38.58 | 5e-22 | 100 |
| LLPS-Ran-1209 | Rattus norvegicus | 38.58 | 5e-22 | 100 |
| LLPS-Bot-1834 | Bos taurus | 38.58 | 5e-22 | 100 |
| LLPS-Tut-0137 | Tursiops truncatus | 38.58 | 5e-22 | 100 |
| LLPS-Rhb-4752 | Rhinopithecus bieti | 38.58 | 5e-22 | 100 |
| LLPS-Orc-4126 | Oryctolagus cuniculus | 38.58 | 6e-22 | 100 |
| LLPS-Otg-3689 | Otolemur garnettii | 38.58 | 5e-22 | 100 |
| LLPS-Man-3513 | Macaca nemestrina | 38.58 | 5e-22 | 100 |
| LLPS-Fec-1889 | Felis catus | 38.58 | 5e-22 | 100 |
| LLPS-Pat-0760 | Pan troglodytes | 38.58 | 5e-22 | 100 |
| LLPS-Urm-0014 | Ursus maritimus | 38.58 | 5e-22 | 100 |
| LLPS-Hos-0769 | Homo sapiens | 38.58 | 5e-22 | 100 |
| LLPS-Ict-1478 | Ictidomys tridecemlineatus | 38.58 | 5e-22 | 100 |
| LLPS-Nol-3188 | Nomascus leucogenys | 38.58 | 5e-22 | 100 |
| LLPS-Cas-1390 | Carlito syrichta | 38.58 | 5e-22 | 100 |
| LLPS-Mam-2145 | Macaca mulatta | 38.58 | 5e-22 | 100 |
| LLPS-Eqc-0343 | Equus caballus | 38.58 | 9e-22 | 100 |
| LLPS-Caf-2454 | Canis familiaris | 38.58 | 5e-22 | 100 |
| LLPS-Scf-1949 | Scleropages formosus | 38.33 | 3e-21 | 97.8 |
| LLPS-Xet-0733 | Xenopus tropicalis | 38.02 | 8e-21 | 96.7 |
| LLPS-Dio-1318 | Dipodomys ordii | 37.8 | 1e-21 | 99.0 |
| LLPS-Lac-3318 | Latimeria chalumnae | 37.31 | 1e-22 | 101 |
| LLPS-Miv-0783 | Microbotryum violaceum | 36.94 | 4e-09 | 62.0 |
| LLPS-Cii-1111 | Ciona intestinalis | 36.13 | 3e-18 | 89.4 |
| LLPS-Tum-1123 | Tuber melanosporum | 35.14 | 2e-08 | 59.3 |
| LLPS-Cae-0556 | Caenorhabditis elegans | 34.75 | 7e-12 | 70.1 |
| LLPS-Gas-0220 | Galdieria sulphuraria | 33.57 | 7e-08 | 57.8 |
| LLPS-Put-0713 | Puccinia triticina | 33.06 | 7e-09 | 61.6 |
| LLPS-Nef-0048 | Neosartorya fischeri | 31.01 | 9e-09 | 60.8 |
| LLPS-Asc-1634 | Aspergillus clavatus | 30.82 | 6e-08 | 58.2 |
| LLPS-Fus-1563 | Fusarium solani | 30.61 | 1e-08 | 60.5 |
| LLPS-Abg-1500 | Absidia glauca | 30.41 | 2e-10 | 66.6 |
| LLPS-Asf-1044 | Aspergillus flavus | 30.19 | 5e-09 | 61.6 |
| LLPS-Aso-1292 | Aspergillus oryzae | 30.19 | 6e-09 | 61.6 |
| LLPS-Trv-0417 | Trichoderma virens | 27.17 | 7e-08 | 57.8 |