LLPS-Pat-4905
CDH13
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | CDH13 isoform 2 |
| Gene Name: | CDH13, CK820_G0029380 |
| Ensembl Gene: | ENSPTRG00000008400.5 |
| Ensembl Protein: | ENSPTRP00000075218.1 |
| Organism: | Pan troglodytes |
| Taxa ID: | 9598 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Centrosome/Spindle pole body, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSPTRT00000081272.1 | ENSPTRP00000075218.1 |
| Ensembl | ENSPTRT00000085445.1 | ENSPTRP00000066067.1 |
| Ensembl | ENSPTRT00000090572.1 | ENSPTRP00000083907.1 |
| Ensembl | ENSPTRT00000080534.1 | ENSPTRP00000079047.1 |
| Ensembl | ENSPTRT00000015485.5 | ENSPTRP00000014336.5 |
| UniProt | H2QBL4, H2QBL4_PANTR, A0A2J8LEK2 | |
| GeneBank | AACZ04051373, AACZ04051374, NBAG03000295 | , PNI45696.1 |
| RefSeq | XM_016930253.1 | XP_016785742.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKTPPGASSR TKCSRELRSF CAFSCPRAKQ PTCTAWFPQQ EHPSENGPQM PGRDSPAAST 60 61 MQVLLLTSAE DLDCTPGFQQ KVFHINQPAE FIEDQSILNL TFSDCKGNDK LRYEVSSPYF 120 121 KVNSDGGLVA LRNITAVGKT LFVHARTPHA EDMAELVIVG GKDIQGSLQD IFKFARTSPV 180 181 PRQKRSIVVS PILIPENQRQ PFPRDVGKVV DSDRPERSKF RLTGKGVDQE PKGIFRINEN 240 241 TGSVSVTRTL DREVIAVYQL FVETTDVNGK TLEGPVPLEV IVIDQNDNRP IFREGPYIGH 300 301 VMEGSPTGTT VMRMTAFDAD DPATDNALLR YNIRQQTPDK PSPNMFYIDP EKGDIVTVVS 360 361 PALLDRETLE NPKYELIIEA QDMAGLDVGL TGTATATIMI DDKNDHSPKF TKKEFQATVE 420 421 EGAVGVIVNL TVEDKDDPTT GAWRAAYTII NGNPGQSFEI HTNPQTNEGM LSVVKPLDYE 480 481 ISAFHTLLIK VENEDPLVPD VSYGPSSTAT VHITVLDVNE GPVFYPDPMM VTRQEDLSVG 540 541 SVLLTVNATD PDSLQHQTIR YSVYKDPAGW LNINPINGTV DTTAVLDRES PFVDNSVYTA 600 601 LFLAIDSGNP PATGTGTLLI TLEDVNDNAP FIYPTVAEVC DDAKNLSVVI LGASDKDLHP 660 661 NTDPFKFEIH KQAVPDKVWK ISKINNTHAL VSLLQNLNKA NYNLPIMVTD SGKPPMTNIT 720 721 DLRVQVCSCR NSKVDCNAAG ALRFSLPSVL LLSLFSLACL 760 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAAACGC CGCCGGGCGC TTCTAGTCGG ACAAAATGCA GCCGAGAACT CCGCTCGTTC 60 61 TGTGCGTTCT CCTGTCCCAG GGCCAAACAA CCCACCTGCA CTGCATGGTT CCCCCAGCAA 120 121 GAACATCCCA GTGAGAATGG CCCACAGATG CCTGGGCGTG ACTCACCTGC AGCTTCAACC 180 181 ATGCAGGTGC TGCTGCTAAC ATCTGCAGAA GATTTGGACT GCACTCCTGG ATTTCAGCAG 240 241 AAAGTGTTCC ATATCAATCA GCCAGCTGAA TTCATTGAGG ACCAGTCAAT TCTAAACTTG 300 301 ACCTTCAGTG ACTGTAAGGG AAACGACAAG CTACGCTATG AGGTCTCGAG CCCATACTTC 360 361 AAGGTGAACA GCGATGGCGG CTTAGTTGCT CTGAGAAACA TAACTGCAGT GGGCAAAACT 420 421 CTGTTCGTCC ATGCACGGAC CCCCCATGCG GAAGATATGG CAGAACTCGT GATTGTCGGG 480 481 GGGAAAGACA TCCAGGGCTC CTTGCAGGAT ATATTTAAAT TTGCAAGAAC TTCTCCTGTC 540 541 CCAAGACAAA AGAGGTCCAT TGTGGTATCT CCCATTTTAA TTCCAGAGAA TCAGAGACAG 600 601 CCTTTCCCAA GAGATGTTGG CAAGGTAGTT GATAGTGACA GGCCAGAAAG GTCCAAGTTC 660 661 CGGCTCACTG GAAAGGGAGT GGATCAAGAG CCTAAAGGAA TTTTCAGAAT CAATGAGAAC 720 721 ACAGGGAGCG TCTCCGTGAC ACGGACCTTG GACAGAGAAG TAATCGCTGT TTATCAACTA 780 781 TTTGTGGAGA CCACTGATGT CAATGGCAAA ACTCTCGAGG GGCCGGTGCC TCTGGAAGTC 840 841 ATTGTGATTG ATCAGAATGA CAACCGACCG ATCTTTCGGG AAGGCCCCTA CATCGGCCAC 900 901 GTCATGGAAG GGTCACCCAC AGGCACCACA GTGATGCGGA TGACAGCCTT TGATGCAGAT 960 961 GACCCAGCCA CCGATAATGC CCTCCTGCGG TATAATATCC GTCAGCAGAC GCCTGACAAG 1020 1021 CCATCTCCCA ACATGTTCTA CATCGATCCT GAGAAAGGAG ACATTGTCAC TGTTGTGTCA 1080 1081 CCTGCACTGC TGGACCGAGA GACTCTGGAA AATCCCAAGT ATGAACTGAT CATCGAGGCT 1140 1141 CAAGATATGG CTGGACTGGA TGTTGGATTA ACAGGCACGG CCACAGCCAC GATCATGATC 1200 1201 GATGACAAAA ATGATCACTC ACCAAAATTC ACCAAGAAAG AGTTTCAAGC CACAGTCGAG 1260 1261 GAAGGAGCTG TGGGAGTTAT TGTCAATTTG ACAGTTGAAG ATAAGGATGA CCCCACCACA 1320 1321 GGTGCATGGA GGGCTGCCTA CACCATCATC AACGGAAACC CCGGGCAGAG CTTTGAAATC 1380 1381 CACACCAACC CTCAAACCAA CGAAGGGATG CTTTCTGTTG TCAAACCATT GGACTATGAA 1440 1441 ATTTCTGCCT TCCACACCCT GCTGATCAAA GTGGAAAATG AAGACCCACT CGTACCCGAC 1500 1501 GTCTCCTACG GCCCCAGCTC CACAGCCACC GTCCACATCA CTGTCCTGGA TGTCAACGAG 1560 1561 GGCCCAGTCT TCTACCCAGA CCCCATGATG GTGACCAGGC AGGAGGACCT CTCTGTGGGC 1620 1621 AGCGTGCTGC TGACAGTGAA TGCCACGGAC CCCGACTCCC TGCAGCATCA AACCATTAGG 1680 1681 TATTCTGTTT ACAAGGACCC AGCAGGTTGG CTGAATATTA ACCCCATCAA TGGGACTGTT 1740 1741 GACACCACAG CTGTGCTGGA CCGTGAGTCC CCATTTGTCG ACAACAGCGT GTACACTGCT 1800 1801 CTCTTCCTGG CAATTGACAG TGGCAACCCT CCCGCTACGG GCACTGGGAC TTTGCTGATA 1860 1861 ACCCTGGAGG ACGTGAATGA CAATGCCCCC TTCATTTACC CCACAGTAGC TGAAGTCTGT 1920 1921 GATGATGCCA AAAACCTCAG TGTAGTCATT TTGGGAGCAT CAGATAAGGA TCTTCATCCG 1980 1981 AATACAGATC CTTTCAAATT TGAAATCCAC AAACAAGCTG TTCCTGATAA AGTCTGGAAG 2040 2041 ATCTCCAAGA TCAACAATAC ACACGCCCTG GTAAGCCTTC TTCAAAATCT GAACAAAGCA 2100 2101 AACTACAACC TGCCCATCAT GGTGACAGAT TCAGGGAAAC CACCCATGAC GAATATCACA 2160 2161 GATCTCAGGG TACAAGTGTG CTCCTGCAGG AATTCCAAAG TGGACTGCAA CGCGGCGGGG 2220 2221 GCCCTGCGCT TCAGCCTGCC CTCAGTCTTG CTCCTCAGCC TCTTCAGCTT AGCTTGTCTG 2280 2281 TGA 2283 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-1231 | Homo sapiens | 99.87 | 0.0 | 1525 |
| LLPS-Pap-4338 | Pan paniscus | 99.85 | 0.0 | 1387 |
| LLPS-Man-2981 | Macaca nemestrina | 99.54 | 0.0 | 883 |
| LLPS-Mal-3915 | Mandrillus leucophaeus | 99.44 | 0.0 | 1085 |
| LLPS-Poa-0315 | Pongo abelii | 99.41 | 0.0 | 1387 |
| LLPS-Chs-4519 | Chlorocebus sabaeus | 99.32 | 0.0 | 1198 |
| LLPS-Gog-1204 | Gorilla gorilla | 99.19 | 0.0 | 1516 |
| LLPS-Maf-2009 | Macaca fascicularis | 99.06 | 0.0 | 1516 |
| LLPS-Nol-2100 | Nomascus leucogenys | 99.06 | 0.0 | 1515 |
| LLPS-Mam-4286 | Macaca mulatta | 99.06 | 0.0 | 1516 |
| LLPS-Paa-3642 | Papio anubis | 98.79 | 0.0 | 1513 |
| LLPS-Cea-2184 | Cercocebus atys | 98.65 | 0.0 | 1510 |
| LLPS-Aon-1552 | Aotus nancymaae | 98.38 | 0.0 | 1378 |
| LLPS-Rhb-3447 | Rhinopithecus bieti | 98.38 | 0.0 | 1500 |
| LLPS-Caj-4847 | Callithrix jacchus | 97.79 | 0.0 | 1369 |
| LLPS-Aim-2961 | Ailuropoda melanoleuca | 97.71 | 0.0 | 879 |
| LLPS-Loa-1498 | Loxodonta africana | 97.71 | 0.0 | 881 |
| LLPS-Caf-2110 | Canis familiaris | 97.62 | 0.0 | 1180 |
| LLPS-Cas-0048 | Carlito syrichta | 97.55 | 0.0 | 635 |
| LLPS-Ova-1020 | Ovis aries | 97.28 | 0.0 | 1174 |
| LLPS-Eqc-0754 | Equus caballus | 97.04 | 0.0 | 1350 |
| LLPS-Urm-1056 | Ursus maritimus | 96.77 | 0.0 | 1353 |
| LLPS-Myl-2823 | Myotis lucifugus | 96.34 | 0.0 | 655 |
| LLPS-Ict-3575 | Ictidomys tridecemlineatus | 96.27 | 0.0 | 951 |
| LLPS-Fec-2546 | Felis catus | 96.18 | 0.0 | 1348 |
| LLPS-Mea-3146 | Mesocricetus auratus | 95.87 | 0.0 | 1338 |
| LLPS-Mup-0792 | Mustela putorius furo | 95.79 | 0.0 | 1269 |
| LLPS-Fud-4440 | Fukomys damarensis | 95.59 | 0.0 | 1342 |
| LLPS-Sus-0850 | Sus scrofa | 95.44 | 0.0 | 1341 |
| LLPS-Ran-1108 | Rattus norvegicus | 95.43 | 0.0 | 1335 |
| LLPS-Orc-3315 | Oryctolagus cuniculus | 95.19 | 0.0 | 824 |
| LLPS-Cap-3930 | Cavia porcellus | 95.0 | 0.0 | 1333 |
| LLPS-Mum-4247 | Mus musculus | 94.85 | 0.0 | 1332 |
| LLPS-Dio-2283 | Dipodomys ordii | 93.52 | 0.0 | 1320 |
| LLPS-Otg-2251 | Otolemur garnettii | 90.6 | 0.0 | 1070 |
| LLPS-Bot-3789 | Bos taurus | 88.39 | 0.0 | 1235 |
| LLPS-Sah-3949 | Sarcophilus harrisii | 87.07 | 0.0 | 1068 |
| LLPS-Ora-2564 | Ornithorhynchus anatinus | 86.43 | 0.0 | 795 |
| LLPS-Pes-3393 | Pelodiscus sinensis | 84.44 | 0.0 | 853 |
| LLPS-Mod-4021 | Monodelphis domestica | 84.22 | 0.0 | 1134 |
| LLPS-Tag-1917 | Taeniopygia guttata | 81.16 | 0.0 | 833 |
| LLPS-Anp-1007 | Anas platyrhynchos | 80.17 | 0.0 | 819 |
| LLPS-Meg-1939 | Meleagris gallopavo | 76.32 | 0.0 | 1098 |
| LLPS-Gaga-3969 | Gallus gallus | 76.18 | 0.0 | 1093 |
| LLPS-Fia-2933 | Ficedula albicollis | 75.74 | 0.0 | 1091 |
| LLPS-Xet-2003 | Xenopus tropicalis | 73.09 | 0.0 | 1050 |
| LLPS-Dar-0187 | Danio rerio | 66.16 | 0.0 | 721 |
| LLPS-Scm-3940 | Scophthalmus maximus | 64.99 | 0.0 | 748 |
| LLPS-Leo-3081 | Lepisosteus oculatus | 64.26 | 0.0 | 917 |
| LLPS-Pof-0086 | Poecilia formosa | 63.93 | 1e-164 | 489 |
| LLPS-Orn-2848 | Oreochromis niloticus | 63.12 | 0.0 | 687 |
| LLPS-Gaa-3618 | Gasterosteus aculeatus | 63.04 | 1e-173 | 513 |
| LLPS-Scf-0063 | Scleropages formosus | 61.32 | 0.0 | 868 |
| LLPS-Icp-2779 | Ictalurus punctatus | 61.29 | 0.0 | 845 |
| LLPS-Xim-0963 | Xiphophorus maculatus | 59.28 | 0.0 | 806 |
| LLPS-Orl-3817 | Oryzias latipes | 57.81 | 0.0 | 788 |
| LLPS-Asm-2909 | Astyanax mexicanus | 55.95 | 0.0 | 754 |
| LLPS-Tar-3701 | Takifugu rubripes | 32.13 | 6e-73 | 261 |