LLPS-Otg-2251
CDH13
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Cadherin 13 |
Gene Name: | CDH13 |
Ensembl Gene: | ENSOGAG00000009291.2 |
Ensembl Protein: | ENSOGAP00000008324.2 |
Organism: | Otolemur garnettii |
Taxa ID: | 30611 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Centrosome/Spindle pole body, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSOGAT00000009297.2 | ENSOGAP00000008324.2 |
UniProt | H0X096, H0X096_OTOGA | |
GeneBank | AAQR03081129, AAQR03081124, AAQR03081127, AAQR03081120, AAQR03081123, AAQR03081122, AAQR03081125, AAQR03081126, AAQR03081128, AAQR03081121 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MIVGGKDIQG SSQVVDSDRP EGSKFRLTGK GVDQEPKGIF RINENTGSVS VTRSLDREMI 60 61 ATYQLFVETT DVNGKTLEGP VPLEVIVIDQ NDNRPIFREG PYVGHVMEGS PTGTMVMRMT 120 121 AFDADDPATD NALLRYNIRQ QTPDKPSPNM FYIDPEKGDI VTVVSPALLD RETLENPKYE 180 181 LIIEAQDMAG LDVGLTGTAT ATIMIDDKND HSPKFTKKEF QATVEEGVMG VIVNLTVEDK 240 241 DDPTTGAWRA AYTIINGNPG QSFEIHTNPQ TNEGMLSVVK PLDYEISAFH TLLIKVENED 300 301 PLVPEVSYGP SSTATVHITV LDVNEGPVFY PDPMMVTRQE NISVGSVLLT VNATDPDSLQ 360 361 HQTIRYSVYK DPAGWLNINP INGTVDTTAV LDRESPFVHN SVYTALFLAI DSGNPPATGT 420 421 GTLLITLEDV NDNAPFIYPT VAEVCDDAKN LSVVILGASD KDLHPNTDPF KFEIHKQTVP 480 481 DKVWKISKIN NTHALVSLLQ NLNKANYNLP IMVTDSGKPP MTNITDLRVQ VCSCKNSKVD 540 541 CNAAGALHAS VLSLLLLCLF SLACK 565 |
Nucleotide CDS Sequence (FASTA) |
1 ATGATCGTCG GGGGAAAAGA CATCCAGGGC TCCTCGCAGG TAGTCGACAG TGACAGACCG 60 61 GAAGGGTCCA AGTTCCGGCT CACTGGAAAG GGAGTGGATC AAGAGCCTAA AGGAATTTTC 120 121 AGAATCAATG AGAACACGGG GAGCGTCTCC GTGACACGGT CCTTGGATAG AGAAATGATT 180 181 GCTACTTATC AACTGTTTGT GGAGACCACA GATGTCAACG GCAAAACCCT CGAGGGGCCA 240 241 GTGCCGCTGG AAGTCATCGT GATTGATCAG AATGACAACA GGCCGATCTT TCGGGAAGGG 300 301 CCCTACGTCG GCCACGTCAT GGAAGGGTCA CCCACAGGGA CCATGGTGAT GCGGATGACA 360 361 GCCTTCGACG CGGATGACCC GGCCACGGAT AATGCCCTCC TGCGCTACAA TATCCGTCAG 420 421 CAGACGCCTG ACAAGCCATC TCCCAACATG TTCTACATCG ATCCTGAGAA AGGAGACATT 480 481 GTCACCGTGG TGTCACCTGC GCTTCTGGAC CGGGAGACTC TGGAAAATCC CAAGTATGAA 540 541 TTGATCATCG AAGCTCAGGA TATGGCTGGA CTGGATGTCG GATTAACAGG CACGGCCACA 600 601 GCCACCATCA TGATCGATGA CAAAAACGAC CACTCTCCAA AGTTCACCAA GAAAGAGTTT 660 661 CAAGCCACAG TTGAGGAAGG AGTCATGGGA GTTATTGTCA ACTTGACAGT TGAAGACAAG 720 721 GATGATCCCA CCACAGGTGC ATGGAGGGCC GCCTACACCA TCATCAACGG AAACCCAGGG 780 781 CAGAGCTTCG AAATCCACAC CAACCCTCAA ACCAACGAGG GGATGCTGTC GGTTGTCAAA 840 841 CCTCTGGACT ATGAGATTTC TGCCTTTCAC ACCCTGCTGA TCAAAGTGGA GAATGAGGAC 900 901 CCGCTGGTAC CCGAGGTCTC CTACGGCCCC AGCTCCACAG CCACCGTTCA CATCACTGTC 960 961 CTGGACGTCA ACGAGGGTCC GGTTTTCTAC CCAGACCCCA TGATGGTGAC CAGGCAGGAG 1020 1021 AACATCTCCG TGGGCAGTGT GCTATTGACC GTGAATGCCA CGGACCCCGA TTCCCTGCAG 1080 1081 CATCAAACCA TCAGGTATTC TGTTTACAAG GACCCAGCAG GCTGGCTGAA TATCAACCCC 1140 1141 ATCAATGGGA CTGTTGACAC CACAGCCGTG CTGGACCGTG AGTCCCCGTT TGTCCACAAC 1200 1201 AGCGTGTACA CTGCACTCTT CCTGGCAATC GACAGTGGCA ACCCTCCTGC AACGGGCACT 1260 1261 GGAACTTTGC TGATAACTCT GGAAGACGTG AACGACAATG CCCCCTTCAT TTACCCCACG 1320 1321 GTAGCCGAAG TCTGTGATGA TGCCAAGAAC CTCAGTGTGG TCATTCTGGG AGCATCAGAC 1380 1381 AAGGATCTTC ACCCAAACAC AGATCCTTTT AAATTTGAAA TCCATAAACA AACCGTTCCT 1440 1441 GATAAAGTCT GGAAGATCTC CAAGATCAAC AATACGCACG CCCTGGTAAG CCTGCTTCAA 1500 1501 AATCTGAACA AAGCAAACTA CAACCTGCCC ATCATGGTAA CAGATTCAGG GAAACCACCC 1560 1561 ATGACAAACA TCACAGATCT CAGGGTACAG GTGTGCTCCT GCAAGAATTC CAAAGTGGAC 1620 1621 TGCAATGCCG CGGGGGCCCT CCATGCCAGT GTCCTCTCAC TCTTGCTCCT CTGCCTCTTC 1680 1681 AGTCTGGCTT GTAAG 1695 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Man-2981 | Macaca nemestrina | 98.37 | 0.0 | 866 |
LLPS-Cas-0048 | Carlito syrichta | 98.14 | 0.0 | 633 |
LLPS-Caj-4847 | Callithrix jacchus | 97.55 | 0.0 | 1066 |
LLPS-Mal-3915 | Mandrillus leucophaeus | 97.54 | 0.0 | 1060 |
LLPS-Loa-1498 | Loxodonta africana | 97.46 | 0.0 | 872 |
LLPS-Aim-2961 | Ailuropoda melanoleuca | 97.46 | 0.0 | 871 |
LLPS-Mea-3146 | Mesocricetus auratus | 97.36 | 0.0 | 1065 |
LLPS-Myl-2823 | Myotis lucifugus | 96.3 | 0.0 | 648 |
LLPS-Ict-3575 | Ictidomys tridecemlineatus | 96.24 | 0.0 | 947 |
LLPS-Dio-2283 | Dipodomys ordii | 94.91 | 0.0 | 1044 |
LLPS-Sus-0850 | Sus scrofa | 91.05 | 0.0 | 1071 |
LLPS-Caf-2110 | Canis familiaris | 90.88 | 0.0 | 1067 |
LLPS-Eqc-0754 | Equus caballus | 90.71 | 0.0 | 1065 |
LLPS-Poa-0315 | Pongo abelii | 90.71 | 0.0 | 1063 |
LLPS-Mam-4286 | Macaca mulatta | 90.71 | 0.0 | 1063 |
LLPS-Urm-1056 | Ursus maritimus | 90.71 | 0.0 | 1064 |
LLPS-Paa-3642 | Papio anubis | 90.71 | 0.0 | 1062 |
LLPS-Gog-1204 | Gorilla gorilla | 90.71 | 0.0 | 1061 |
LLPS-Maf-2009 | Macaca fascicularis | 90.71 | 0.0 | 1063 |
LLPS-Aon-1552 | Aotus nancymaae | 90.71 | 0.0 | 1067 |
LLPS-Cea-2184 | Cercocebus atys | 90.71 | 0.0 | 1062 |
LLPS-Nol-2100 | Nomascus leucogenys | 90.53 | 0.0 | 1061 |
LLPS-Rhb-3447 | Rhinopithecus bieti | 90.53 | 0.0 | 1062 |
LLPS-Pap-4338 | Pan paniscus | 90.53 | 0.0 | 1061 |
LLPS-Pat-4905 | Pan troglodytes | 90.53 | 0.0 | 1061 |
LLPS-Hos-1231 | Homo sapiens | 90.53 | 0.0 | 1061 |
LLPS-Ova-1020 | Ovis aries | 90.53 | 0.0 | 1061 |
LLPS-Chs-4519 | Chlorocebus sabaeus | 90.53 | 0.0 | 1062 |
LLPS-Fec-2546 | Felis catus | 90.36 | 0.0 | 1064 |
LLPS-Cap-3930 | Cavia porcellus | 89.85 | 0.0 | 1057 |
LLPS-Mup-0792 | Mustela putorius furo | 89.85 | 0.0 | 1056 |
LLPS-Ran-1108 | Rattus norvegicus | 89.67 | 0.0 | 1056 |
LLPS-Mum-4247 | Mus musculus | 89.67 | 0.0 | 1056 |
LLPS-Fud-4440 | Fukomys damarensis | 88.81 | 0.0 | 1045 |
LLPS-Sah-3949 | Sarcophilus harrisii | 87.74 | 0.0 | 975 |
LLPS-Mod-4021 | Monodelphis domestica | 87.36 | 0.0 | 973 |
LLPS-Ora-2564 | Ornithorhynchus anatinus | 86.76 | 0.0 | 794 |
LLPS-Pes-3393 | Pelodiscus sinensis | 84.94 | 0.0 | 853 |
LLPS-Orc-3315 | Oryctolagus cuniculus | 84.01 | 0.0 | 533 |
LLPS-Tag-1917 | Taeniopygia guttata | 82.05 | 0.0 | 833 |
LLPS-Bot-3789 | Bos taurus | 81.63 | 0.0 | 948 |
LLPS-Anp-1007 | Anas platyrhynchos | 81.17 | 0.0 | 822 |
LLPS-Fia-2933 | Ficedula albicollis | 80.57 | 0.0 | 905 |
LLPS-Gaga-3969 | Gallus gallus | 80.0 | 0.0 | 894 |
LLPS-Meg-1939 | Meleagris gallopavo | 79.62 | 0.0 | 894 |
LLPS-Xet-2003 | Xenopus tropicalis | 79.06 | 0.0 | 880 |
LLPS-Leo-3081 | Lepisosteus oculatus | 70.94 | 0.0 | 778 |
LLPS-Scf-0063 | Scleropages formosus | 69.04 | 0.0 | 762 |
LLPS-Icp-2779 | Ictalurus punctatus | 66.98 | 0.0 | 728 |
LLPS-Dar-0187 | Danio rerio | 66.86 | 0.0 | 721 |
LLPS-Asm-2909 | Astyanax mexicanus | 66.81 | 0.0 | 667 |
LLPS-Scm-3940 | Scophthalmus maximus | 65.85 | 0.0 | 719 |
LLPS-Xim-0963 | Xiphophorus maculatus | 65.09 | 0.0 | 712 |
LLPS-Pof-0086 | Poecilia formosa | 64.29 | 2e-168 | 492 |
LLPS-Gaa-3618 | Gasterosteus aculeatus | 64.12 | 3e-178 | 517 |
LLPS-Orl-3817 | Oryzias latipes | 63.77 | 0.0 | 692 |
LLPS-Orn-2848 | Oreochromis niloticus | 63.36 | 0.0 | 688 |
LLPS-Tar-3701 | Takifugu rubripes | 32.3 | 4e-71 | 251 |