LLPS-Pat-3324
LMNB2
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | LMNB2 isoform 1 |
| Gene Name: | LMNB2, CK820_G0051227 |
| Ensembl Gene: | ENSPTRG00000010238.4 |
| Ensembl Protein: | ENSPTRP00000086514.1 |
| Organism: | Pan troglodytes |
| Taxa ID: | 9598 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Paraspeckle, P-body, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSPTRT00000078334.1 | ENSPTRP00000086514.1 |
| Ensembl | ENSPTRT00000097985.1 | ENSPTRP00000086301.1 |
| Ensembl | ENSPTRT00000018803.4 | ENSPTRP00000017403.4 |
| UniProt | H2QEX0, H2QEX0_PANTR, A0A2J8J2Y8, K7C848 | |
| GeneBank | AACZ04069008, GABF01001740, NBAG03000531 | , PNI17137.1, JAA20405.1 |
| RefSeq | XM_016934651.1 | XP_016790140.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSPPSPGRRR EQRRPRAAAT MATPLPGRAG GPATPLSPTR LSRLQEKEEL RELNDRLAHY 60 61 IDRVRALELE NDRLLLKISE KEEVTTREVS GIKALYESEL ADARRVLDET ARERARLQIE 120 121 IGKLRAELDE VNKSAKKREG ELTVAQGRVK DLESLFHRSE VELAAALSDK RGLESDVAEL 180 181 RAQLAKAEDG HAVAKKQLEK ETLMRVDLEN RCQSLQEELD FRKSVFEEEV RETRRRHERR 240 241 LVEVDSSRQQ EYDFKMAQAL EELRSQHDEQ VRLYKLELEQ TYQAKLDSAK LSSDQNDKAA 300 301 SAAREELKEA RMRLESLSYQ LSGLQKQASA AEDRIRELEE AMAGERDKFR KMLDAKEQEM 360 361 TEMRDVMQQQ LAEYQELLDV KLALDMEINA YRKLLEGEEE RLKLSPSPSS RVTVSRATSS 420 421 SSGSMSATGR LGRSKRKRLE VEEPLGSGPS VLGTGTGGSG GFHLAQQASA SGSVSIEEID 480 481 LEGKFVQLKN NSDKDQSLGN WRIKRQVLEG EEMAYKFTPK YILRAGQMVT VWAAGAGVAH 540 541 SPPSTLVWKG QSSWGTGESF RTVLVNADGE EVAMRTVKKS SVMRENENGE EEEEEAEFGE 600 601 EDLFHQQGDP RTTSRGCYVM 620 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGCCCGC CGAGCCCGGG CCGCCGTCGG GAGCAGCGCA GGCCGCGAGC CGCCGCCACC 60 61 ATGGCCACGC CGCTGCCCGG CCGCGCGGGC GGGCCCGCCA CGCCGCTGTC GCCCACGCGC 120 121 CTGTCGCGGC TGCAGGAGAA GGAGGAGCTG CGCGAGCTCA ACGACCGCCT GGCGCACTAC 180 181 ATCGACCGCG TCCGCGCGCT GGAGCTGGAG AACGACCGGC TGCTGCTCAA GATCTCAGAG 240 241 AAGGAGGAGG TGACCACGCG CGAGGTGAGT GGCATCAAGG CGCTGTACGA GTCGGAGCTG 300 301 GCCGATGCCC GGAGAGTCCT GGATGAGACG GCTCGAGAGC GTGCCCGGCT GCAGATAGAG 360 361 ATTGGGAAGC TGAGGGCAGA GTTGGACGAG GTCAACAAGA GCGCCAAGAA GAGGGAGGGC 420 421 GAGCTTACGG TGGCCCAGGG CCGTGTGAAG GACCTGGAGT CCCTGTTCCA CCGGAGCGAG 480 481 GTGGAGCTGG CAGCCGCCCT CAGCGACAAG CGCGGCCTGG AGAGTGACGT GGCTGAGCTG 540 541 CGGGCCCAGC TGGCCAAGGC CGAGGACGGT CATGCAGTGG CCAAAAAGCA GCTGGAGAAG 600 601 GAGACGCTGA TGCGTGTGGA CCTGGAGAAC CGCTGCCAGA GCCTGCAGGA GGAGCTGGAC 660 661 TTCCGGAAGA GTGTGTTCGA GGAGGAGGTG CGGGAGACGC GGCGGCGGCA CGAGCGGCGC 720 721 CTGGTGGAGG TGGACAGCAG CCGGCAGCAG GAGTACGACT TCAAGATGGC ACAGGCGCTG 780 781 GAGGAGCTGC GGAGCCAGCA CGACGAGCAA GTGCGGCTCT ACAAGCTGGA GCTGGAGCAG 840 841 ACCTACCAGG CCAAGCTGGA CAGCGCCAAG CTGAGCTCTG ACCAGAACGA CAAGGCGGCC 900 901 AGTGCGGCTC GCGAGGAGCT GAAGGAGGCC CGCATGCGCC TGGAGTCCCT CAGCTACCAG 960 961 CTCTCCGGCC TCCAGAAGCA GGCCAGTGCC GCTGAAGATC GCATTCGGGA GCTGGAGGAG 1020 1021 GCCATGGCCG GGGAGCGGGA CAAGTTCCGG AAGATGCTGG ACGCCAAGGA GCAGGAGATG 1080 1081 ACGGAGATGC GGGACGTGAT GCAGCAGCAG CTGGCCGAGT ACCAGGAGCT GCTGGACGTG 1140 1141 AAGCTGGCCC TGGACATGGA GATCAACGCC TACCGGAAGC TCCTGGAGGG CGAGGAGGAG 1200 1201 AGGCTGAAGC TGTCCCCCAG CCCATCCTCG CGCGTCACCG TCTCACGAGC CACCTCGAGC 1260 1261 AGCAGCGGCA GCATGTCCGC CACCGGGCGC CTGGGCCGCA GTAAGCGGAA GCGGCTGGAG 1320 1321 GTGGAGGAGC CCTTGGGCAG CGGCCCAAGC GTCCTGGGCA CGGGCACGGG TGGCAGCGGT 1380 1381 GGCTTCCACC TGGCCCAGCA GGCCTCGGCC TCGGGCAGCG TCAGCATCGA GGAGATCGAC 1440 1441 CTGGAGGGCA AGTTTGTGCA GCTCAAGAAC AACTCGGACA AGGATCAGTC TCTGGGGAAC 1500 1501 TGGAGAATCA AGAGGCAGGT CTTGGAGGGG GAGGAGATGG CCTACAAGTT CACGCCCAAG 1560 1561 TACATCCTGC GCGCCGGCCA GATGGTCACG GTGTGGGCAG CTGGTGCGGG GGTGGCCCAC 1620 1621 AGTCCCCCCT CGACGCTGGT GTGGAAGGGC CAGAGCAGTT GGGGCACGGG CGAGAGCTTC 1680 1681 CGCACCGTCC TGGTTAACGC GGATGGCGAG GAAGTGGCCA TGAGGACCGT GAAGAAGTCC 1740 1741 TCGGTGATGC GTGAGAATGA GAATGGGGAG GAGGAGGAGG AGGAAGCCGA GTTTGGCGAG 1800 1801 GAGGATCTTT TCCACCAACA GGGGGACCCG AGGACCACCT CAAGAGGCTG CTACGTGATG 1860 1861 TGA 1863 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Pap-1603 | Pan paniscus | 99.81 | 0.0 | 840 |
| LLPS-Hos-1497 | Homo sapiens | 99.66 | 0.0 | 970 |
| LLPS-Poa-2077 | Pongo abelii | 99.2 | 0.0 | 795 |
| LLPS-Gog-1150 | Gorilla gorilla | 99.18 | 0.0 | 560 |
| LLPS-Caj-2300 | Callithrix jacchus | 98.0 | 4e-125 | 380 |
| LLPS-Nol-1953 | Nomascus leucogenys | 95.48 | 0.0 | 905 |
| LLPS-Man-0085 | Macaca nemestrina | 95.31 | 0.0 | 960 |
| LLPS-Mam-2701 | Macaca mulatta | 95.31 | 0.0 | 961 |
| LLPS-Paa-1031 | Papio anubis | 95.14 | 0.0 | 961 |
| LLPS-Cea-1611 | Cercocebus atys | 94.97 | 0.0 | 959 |
| LLPS-Chs-2418 | Chlorocebus sabaeus | 94.97 | 0.0 | 960 |
| LLPS-Rhb-0150 | Rhinopithecus bieti | 93.85 | 0.0 | 952 |
| LLPS-Mea-2268 | Mesocricetus auratus | 93.46 | 0.0 | 615 |
| LLPS-Ict-1285 | Ictidomys tridecemlineatus | 92.37 | 0.0 | 611 |
| LLPS-Dio-1094 | Dipodomys ordii | 91.93 | 0.0 | 561 |
| LLPS-Fud-0458 | Fukomys damarensis | 88.45 | 8e-159 | 471 |
| LLPS-Aon-0733 | Aotus nancymaae | 87.91 | 0.0 | 906 |
| LLPS-Otg-3327 | Otolemur garnettii | 87.19 | 0.0 | 902 |
| LLPS-Fec-1818 | Felis catus | 85.38 | 0.0 | 897 |
| LLPS-Myl-1237 | Myotis lucifugus | 84.87 | 2e-148 | 450 |
| LLPS-Cap-0574 | Cavia porcellus | 84.74 | 0.0 | 553 |
| LLPS-Bot-0817 | Bos taurus | 84.64 | 0.0 | 876 |
| LLPS-Sus-1191 | Sus scrofa | 83.97 | 0.0 | 853 |
| LLPS-Mup-0126 | Mustela putorius furo | 83.39 | 0.0 | 864 |
| LLPS-Eqc-0433 | Equus caballus | 83.33 | 1e-179 | 531 |
| LLPS-Mum-0894 | Mus musculus | 82.78 | 0.0 | 823 |
| LLPS-Ran-1731 | Rattus norvegicus | 82.33 | 0.0 | 818 |
| LLPS-Loa-2339 | Loxodonta africana | 81.1 | 0.0 | 813 |
| LLPS-Sah-1384 | Sarcophilus harrisii | 80.8 | 0.0 | 793 |
| LLPS-Tag-2235 | Taeniopygia guttata | 78.3 | 0.0 | 785 |
| LLPS-Fia-2489 | Ficedula albicollis | 78.13 | 0.0 | 783 |
| LLPS-Ora-1730 | Ornithorhynchus anatinus | 76.27 | 0.0 | 588 |
| LLPS-Pes-1885 | Pelodiscus sinensis | 75.65 | 0.0 | 674 |
| LLPS-Asm-1296 | Astyanax mexicanus | 71.54 | 1e-160 | 480 |
| LLPS-Xet-2733 | Xenopus tropicalis | 71.36 | 0.0 | 727 |
| LLPS-Icp-2872 | Ictalurus punctatus | 70.14 | 6e-157 | 471 |
| LLPS-Gaa-2260 | Gasterosteus aculeatus | 68.56 | 9e-151 | 454 |
| LLPS-Pof-1334 | Poecilia formosa | 68.02 | 4e-152 | 458 |
| LLPS-Orn-0081 | Oreochromis niloticus | 68.02 | 3e-150 | 453 |
| LLPS-Xim-1195 | Xiphophorus maculatus | 67.21 | 5e-149 | 450 |
| LLPS-Dar-3048 | Danio rerio | 67.11 | 0.0 | 660 |
| LLPS-Scm-2112 | Scophthalmus maximus | 66.94 | 3e-147 | 446 |
| LLPS-Ten-0329 | Tetraodon nigroviridis | 66.3 | 2e-139 | 426 |
| LLPS-Tar-0266 | Takifugu rubripes | 66.02 | 2e-143 | 435 |
| LLPS-Orl-0033 | Oryzias latipes | 65.04 | 8e-145 | 439 |
| LLPS-Scf-0112 | Scleropages formosus | 64.92 | 0.0 | 654 |
| LLPS-Lac-1287 | Latimeria chalumnae | 63.47 | 0.0 | 645 |
| LLPS-Orc-1046 | Oryctolagus cuniculus | 61.92 | 5e-130 | 402 |
| LLPS-Anc-0702 | Anolis carolinensis | 60.99 | 9e-121 | 378 |
| LLPS-Mod-1852 | Monodelphis domestica | 60.38 | 8e-120 | 377 |
| LLPS-Urm-2345 | Ursus maritimus | 58.91 | 3e-75 | 254 |
| LLPS-Caf-2407 | Canis familiaris | 58.77 | 1e-114 | 367 |
| LLPS-Tut-0526 | Tursiops truncatus | 58.63 | 8e-117 | 370 |
| LLPS-Maf-2362 | Macaca fascicularis | 58.47 | 4e-116 | 368 |
| LLPS-Mal-4209 | Mandrillus leucophaeus | 58.47 | 4e-116 | 368 |
| LLPS-Cas-3831 | Carlito syrichta | 56.67 | 4e-42 | 164 |
| LLPS-Anp-2884 | Anas platyrhynchos | 56.2 | 2e-67 | 234 |
| LLPS-Ere-0048 | Erinaceus europaeus | 55.73 | 2e-170 | 508 |
| LLPS-Ova-1051 | Ovis aries | 52.1 | 3e-169 | 502 |
| LLPS-Leo-2642 | Lepisosteus oculatus | 49.67 | 2e-157 | 472 |
| LLPS-Gaga-0639 | Gallus gallus | 48.74 | 1e-149 | 454 |
| LLPS-Aim-2140 | Ailuropoda melanoleuca | 48.24 | 3e-147 | 446 |
| LLPS-Meg-2532 | Meleagris gallopavo | 48.14 | 5e-123 | 380 |
| LLPS-Cae-1067 | Caenorhabditis elegans | 42.61 | 9e-21 | 100 |
| LLPS-Drm-2307 | Drosophila melanogaster | 39.89 | 4e-63 | 226 |
| LLPS-Cii-1519 | Ciona intestinalis | 37.16 | 1e-48 | 182 |
| LLPS-Cis-1761 | Ciona savignyi | 36.16 | 5e-42 | 162 |