LLPS-Dac-0438
DCAR_004468
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Nuclear pore complex protein Nup85 |
| Gene Name: | DCAR_004468 |
| Ensembl Gene: | DCAR_004468 |
| Ensembl Protein: | KZN11812 |
| Organism: | Daucus carota |
| Taxa ID: | 79200 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nuclear pore complex, Nucleolus, Centrosome/Spindle pole body | Predicted from orthologs | (View) |
▼ FUNCTION
| Functions as a component of the nuclear pore complex (NPC). |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | KZN11812 | KZN11812 |
| UniProt | A0A166J5I2, A0A166J5I2_DAUCS | |
| GeneBank | LNRQ01000001 | KZN11812.1 |
| RefSeq | XM_017373908.1, XM_017373909.1, XM_017373910.1, XM_017373911.1, XM_017373912.1 | XP_017229397.1, XP_017229398.1, XP_017229399.1, XP_017229400.1, XP_017229401.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPGVASNSDD LALIPHSPTN SHTIALHHTV KPPISRLSIA WARGNSLRVA VIRKPQAGES 60 61 DDEPGGQVVE VKLGVDEADI YEAQWRRIAY GSVTPFAVLQ SRKNLNTNAY NADLPAYVIE 120 121 YSREINSLLG NQKVLPDPVI EDPKTVLQRV DEPTFSKAAW ELMEIFFADK QSDGWIPERL 180 181 VDWLSDYDNL IHGEQPTIYS RLVDFQTELV NLQAVEEDPK YWDVLSAALA VGWLDIVVKL 240 241 LRLHSSYQHN QIGSRETENG LVETVVVLVS KMPRLRPNLS AGKLGECFDN KPDFVKAWEK 300 301 WRGQITKLDC SAFWLQCGHQ DTREGLKKLL QIMLGNASVL SATTFHWVEL FIGHFLYIRP 360 361 FTVGMESMYN LAQKCMQFKP GSSPHKLMEL LNGILGENTE VVLAECSRSF GSWMITHAIE 420 421 LLTAGSTQAD ILLHEERNNL GGICIEELHR LVYAQVLSSH ALTWQIAPIY LASCKKQGMG 480 481 LLEILLYKQP VGHNQVLLKN IEICRMYELD NVGANAMKIA GVHHWKHGKK GSGVFWLQQA 540 541 QDEFRLNRIA QQLFDFVGKS VSDESFKQWE GLIELLGSQS KAAGGLDFLH KYRDFKRSLQ 600 601 QVTDIACIDA ARKASEALIL LMKNPSTPQR FWLSLLYDSV KLLNWKERTL LNVPQTNLLL 660 661 NKLQELSMAR LRPDFIEADL PPQALSSVRL ALATNLGRAI LEE 703 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCCGGTG TCGCCTCCAA CTCCGATGAC CTCGCTCTCA TCCCTCACTC ACCAACCAAC 60 61 TCTCACACAA TCGCACTCCA CCACACGGTG AAACCCCCAA TTTCTCGCCT CTCAATCGCG 120 121 TGGGCGCGTG GAAACTCCCT GCGCGTCGCC GTTATCCGGA AGCCGCAGGC CGGCGAGTCC 180 181 GACGACGAGC CGGGAGGACA AGTAGTGGAG GTGAAGCTCG GCGTTGACGA AGCCGATATA 240 241 TACGAGGCGC AGTGGAGGAG AATTGCTTAT GGCTCCGTTA CTCCGTTTGC GGTGCTTCAG 300 301 AGTCGAAAAA ATTTGAATAC GAATGCGTAT AATGCTGATC TGCCAGCCTA TGTGATTGAG 360 361 TACAGCAGGG AAATAAACTC ATTGCTGGGG AATCAAAAAG TGCTTCCTGA TCCGGTTATT 420 421 GAAGATCCGA AAACAGTTCT ACAGAGGGTT GACGAGCCAA CATTTTCGAA AGCGGCTTGG 480 481 GAACTGATGG AAATATTCTT TGCTGATAAG CAGTCTGATG GTTGGATACC TGAACGCCTT 540 541 GTTGATTGGT TATCAGATTA CGACAACCTT ATCCACGGAG AGCAACCAAC AATCTATTCC 600 601 AGACTTGTAG ATTTTCAAAC TGAGCTTGTT AATTTACAGG CAGTTGAAGA GGATCCCAAG 660 661 TATTGGGACG TACTATCAGC TGCACTAGCC GTTGGCTGGC TAGATATTGT GGTGAAATTG 720 721 TTGCGCCTGC ACAGTTCTTA TCAGCACAAT CAAATAGGGA GTCGTGAGAC AGAGAATGGA 780 781 TTGGTAGAGA CTGTTGTTGT TCTTGTCTCA AAAATGCCAC GCCTGCGCCC TAATCTATCA 840 841 GCAGGAAAAT TAGGCGAATG CTTTGACAAT AAGCCTGATT TTGTTAAGGC ATGGGAGAAA 900 901 TGGCGAGGAC AAATTACTAA GCTCGATTGC AGTGCCTTTT GGCTTCAATG TGGGCATCAG 960 961 GACACAAGGG AGGGTCTGAA AAAATTGTTG CAAATTATGT TGGGTAATGC TAGTGTCCTT 1020 1021 TCTGCTACAA CATTTCATTG GGTAGAGCTG TTTATCGGAC ACTTCCTGTA CATCAGACCA 1080 1081 TTCACTGTGG GTATGGAAAG CATGTATAAT CTTGCTCAGA AATGCATGCA ATTCAAACCA 1140 1141 GGATCCAGTC CTCATAAATT GATGGAACTA CTTAATGGAA TTCTTGGAGA AAATACTGAG 1200 1201 GTTGTCTTAG CTGAATGCTC AAGATCGTTT GGTTCCTGGA TGATTACTCA TGCCATTGAG 1260 1261 CTGCTAACGG CTGGGAGCAC ACAAGCAGAT ATATTATTGC ATGAAGAGCG TAATAATCTG 1320 1321 GGGGGAATTT GCATAGAGGA GCTCCATCGA CTTGTCTATG CCCAAGTTCT GTCTTCACAT 1380 1381 GCATTAACTT GGCAAATTGC TCCAATATAT TTGGCATCAT GCAAGAAGCA AGGAATGGGC 1440 1441 TTGTTAGAGA TATTATTGTA CAAACAACCC GTAGGACATA ACCAAGTACT GCTCAAGAAT 1500 1501 ATAGAGATTT GCCGGATGTA TGAACTTGAT AATGTTGGTG CAAACGCAAT GAAGATTGCC 1560 1561 GGTGTACATC ACTGGAAGCA TGGGAAGAAA GGGTCTGGAG TTTTTTGGCT TCAGCAAGCT 1620 1621 CAAGATGAAT TTCGTTTGAA CAGAATTGCT CAGCAGCTGT TTGATTTTGT TGGGAAGTCG 1680 1681 GTCTCTGATG AAAGTTTTAA GCAATGGGAG GGATTAATTG AATTATTGGG ATCTCAGTCT 1740 1741 AAAGCTGCGG GTGGTCTGGA CTTTCTCCAC AAGTATAGAG ATTTCAAGAG ATCCCTTCAG 1800 1801 CAGGTTACTG ATATTGCATG TATTGATGCT GCACGAAAAG CTTCTGAAGC TCTCATATTG 1860 1861 CTTATGAAGA ACCCATCAAC GCCTCAACGT TTCTGGCTAT CTCTTTTATA TGACTCGGTG 1920 1921 AAATTGCTTA ACTGGAAGGA GCGTACTCTC TTAAACGTCC CTCAAACTAA CTTGTTACTA 1980 1981 AATAAATTGC AAGAGTTGTC GATGGCAAGG CTACGTCCTG ACTTTATAGA AGCAGACTTG 2040 2041 CCGCCTCAGG CCTTGAGCTC TGTCAGGCTG GCCCTTGCAA CTAACCTTGG ACGAGCCATC 2100 2101 TTGGAGGAGT AA 2112 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nuclear membrane | |
Cellular Component | Nuclear pore outer ring | |
Molecular Function | Structural constituent of nuclear pore | |
Biological Process | MRNA export from nucleus | |
Biological Process | Response to abscisic acid |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Phv-0716 | Phaseolus vulgaris | 72.3 | 0.0 | 751 |
| LLPS-Hea-0193 | Helianthus annuus | 70.14 | 0.0 | 1004 |
| LLPS-Viv-1240 | Vitis vinifera | 69.41 | 0.0 | 1051 |
| LLPS-Thc-0111 | Theobroma cacao | 69.23 | 0.0 | 1004 |
| LLPS-Gor-0317 | Gossypium raimondii | 69.23 | 0.0 | 1023 |
| LLPS-Nia-0459 | Nicotiana attenuata | 68.93 | 0.0 | 1013 |
| LLPS-Mae-1552 | Manihot esculenta | 68.92 | 0.0 | 1026 |
| LLPS-Coc-1414 | Corchorus capsularis | 68.91 | 0.0 | 1019 |
| LLPS-Pot-0323 | Populus trichocarpa | 68.47 | 0.0 | 993 |
| LLPS-Prp-0477 | Prunus persica | 68.09 | 0.0 | 1023 |
| LLPS-Glm-0194 | Glycine max | 67.05 | 0.0 | 962 |
| LLPS-Met-0934 | Medicago truncatula | 66.52 | 0.0 | 974 |
| LLPS-Sol-0904 | Solanum lycopersicum | 64.37 | 0.0 | 988 |
| LLPS-Orbr-0177 | Oryza brachyantha | 64.17 | 0.0 | 815 |
| LLPS-Art-0271 | Arabidopsis thaliana | 64.06 | 0.0 | 939 |
| LLPS-Brn-0120 | Brassica napus | 63.8 | 0.0 | 925 |
| LLPS-Brr-0904 | Brassica rapa | 63.52 | 0.0 | 912 |
| LLPS-Arl-1707 | Arabidopsis lyrata | 63.22 | 0.0 | 920 |
| LLPS-Amt-0795 | Amborella trichopoda | 62.79 | 0.0 | 914 |
| LLPS-Bro-1838 | Brassica oleracea | 62.55 | 0.0 | 907 |
| LLPS-Cus-1215 | Cucumis sativus | 61.7 | 0.0 | 918 |
| LLPS-Sob-0387 | Sorghum bicolor | 61.44 | 0.0 | 850 |
| LLPS-Mua-0363 | Musa acuminata | 61.14 | 0.0 | 904 |
| LLPS-Hov-0092 | Hordeum vulgare | 60.28 | 0.0 | 857 |
| LLPS-Orgl-0359 | Oryza glumaepatula | 60.16 | 0.0 | 864 |
| LLPS-Sei-0121 | Setaria italica | 60.16 | 0.0 | 857 |
| LLPS-Orb-1590 | Oryza barthii | 60.03 | 0.0 | 861 |
| LLPS-Orr-0735 | Oryza rufipogon | 60.03 | 0.0 | 861 |
| LLPS-Ors-0154 | Oryza sativa | 60.03 | 0.0 | 862 |
| LLPS-Tra-0672 | Triticum aestivum | 59.92 | 0.0 | 842 |
| LLPS-Orni-0065 | Oryza nivara | 59.89 | 0.0 | 861 |
| LLPS-Zem-0773 | Zea mays | 59.83 | 0.0 | 838 |
| LLPS-Lep-0308 | Leersia perrieri | 59.62 | 0.0 | 854 |
| LLPS-Brd-0065 | Brachypodium distachyon | 58.85 | 0.0 | 855 |
| LLPS-Via-1097 | Vigna angularis | 54.55 | 0.0 | 762 |
| LLPS-Orm-0377 | Oryza meridionalis | 53.62 | 0.0 | 703 |
| LLPS-Orp-0066 | Oryza punctata | 53.13 | 0.0 | 694 |
| LLPS-Tru-0126 | Triticum urartu | 52.7 | 0.0 | 611 |
| LLPS-Ori-0384 | Oryza indica | 51.84 | 0.0 | 660 |
| LLPS-Vir-2233 | Vigna radiata | 51.57 | 5e-80 | 262 |
| LLPS-Php-0306 | Physcomitrella patens | 45.38 | 0.0 | 590 |
| LLPS-Sem-1670 | Selaginella moellendorffii | 35.37 | 2e-39 | 150 |
| LLPS-Dar-1929 | Danio rerio | 27.27 | 2e-13 | 74.7 |
| LLPS-Paa-0881 | Papio anubis | 27.25 | 7e-22 | 104 |
| LLPS-Mal-0284 | Mandrillus leucophaeus | 26.56 | 6e-24 | 110 |
| LLPS-Eqc-2446 | Equus caballus | 26.32 | 3e-23 | 109 |
| LLPS-Man-1348 | Macaca nemestrina | 25.59 | 2e-19 | 96.7 |
| LLPS-Orn-1429 | Oreochromis niloticus | 25.15 | 1e-24 | 113 |
| LLPS-Meg-1917 | Meleagris gallopavo | 24.87 | 2e-27 | 122 |
| LLPS-Icp-0612 | Ictalurus punctatus | 24.76 | 1e-22 | 107 |
| LLPS-Ora-1589 | Ornithorhynchus anatinus | 24.72 | 5e-14 | 79.7 |
| LLPS-Otg-1583 | Otolemur garnettii | 24.65 | 5e-24 | 111 |
| LLPS-Gaga-2627 | Gallus gallus | 24.55 | 9e-28 | 124 |
| LLPS-Fud-1039 | Fukomys damarensis | 24.47 | 2e-23 | 110 |
| LLPS-Sah-0988 | Sarcophilus harrisii | 24.42 | 9e-26 | 117 |
| LLPS-Mod-1474 | Monodelphis domestica | 24.42 | 1e-25 | 116 |
| LLPS-Myl-2874 | Myotis lucifugus | 24.38 | 8e-24 | 110 |
| LLPS-Cas-2914 | Carlito syrichta | 24.38 | 4e-26 | 118 |
| LLPS-Leo-0296 | Lepisosteus oculatus | 24.37 | 3e-23 | 108 |
| LLPS-Loa-0163 | Loxodonta africana | 24.29 | 4e-24 | 112 |
| LLPS-Cap-0422 | Cavia porcellus | 24.24 | 5e-25 | 114 |
| LLPS-Ten-0803 | Tetraodon nigroviridis | 24.24 | 5e-23 | 108 |
| LLPS-Tag-0526 | Taeniopygia guttata | 24.21 | 2e-28 | 125 |
| LLPS-Xim-0174 | Xiphophorus maculatus | 24.17 | 1e-25 | 116 |
| LLPS-Urm-0299 | Ursus maritimus | 24.16 | 2e-24 | 112 |
| LLPS-Asm-1804 | Astyanax mexicanus | 24.12 | 4e-22 | 105 |
| LLPS-Pof-2859 | Poecilia formosa | 24.09 | 6e-25 | 114 |
| LLPS-Mea-0122 | Mesocricetus auratus | 24.06 | 2e-24 | 113 |
| LLPS-Cea-0190 | Cercocebus atys | 24.01 | 2e-26 | 119 |
| LLPS-Lac-0291 | Latimeria chalumnae | 24.01 | 1e-23 | 110 |
| LLPS-Ict-0198 | Ictidomys tridecemlineatus | 23.92 | 1e-25 | 116 |
| LLPS-Gaa-0016 | Gasterosteus aculeatus | 23.84 | 3e-23 | 108 |
| LLPS-Chs-1033 | Chlorocebus sabaeus | 23.84 | 8e-25 | 114 |
| LLPS-Fec-0731 | Felis catus | 23.79 | 3e-24 | 112 |
| LLPS-Cii-0012 | Ciona intestinalis | 23.77 | 5e-07 | 55.5 |
| LLPS-Scf-1550 | Scleropages formosus | 23.76 | 5e-24 | 111 |
| LLPS-Pap-0158 | Pan paniscus | 23.76 | 2e-24 | 112 |
| LLPS-Tar-1166 | Takifugu rubripes | 23.75 | 3e-22 | 106 |
| LLPS-Pat-2100 | Pan troglodytes | 23.75 | 6e-24 | 111 |
| LLPS-Poa-1653 | Pongo abelii | 23.74 | 3e-24 | 112 |
| LLPS-Nol-0422 | Nomascus leucogenys | 23.74 | 3e-25 | 115 |
| LLPS-Rhb-0808 | Rhinopithecus bieti | 23.74 | 4e-25 | 115 |
| LLPS-Orc-2216 | Oryctolagus cuniculus | 23.74 | 7e-25 | 114 |
| LLPS-Anp-0043 | Anas platyrhynchos | 23.73 | 2e-26 | 119 |
| LLPS-Fia-0242 | Ficedula albicollis | 23.69 | 1e-25 | 116 |
| LLPS-Mup-0761 | Mustela putorius furo | 23.58 | 9e-26 | 117 |
| LLPS-Bot-0600 | Bos taurus | 23.56 | 2e-24 | 112 |
| LLPS-Dio-1289 | Dipodomys ordii | 23.56 | 3e-23 | 109 |
| LLPS-Ran-0712 | Rattus norvegicus | 23.56 | 2e-24 | 112 |
| LLPS-Maf-2040 | Macaca fascicularis | 23.56 | 2e-24 | 112 |
| LLPS-Gog-0405 | Gorilla gorilla | 23.56 | 5e-24 | 111 |
| LLPS-Mam-0306 | Macaca mulatta | 23.56 | 3e-24 | 112 |
| LLPS-Hos-0681 | Homo sapiens | 23.56 | 6e-24 | 111 |
| LLPS-Cis-0545 | Ciona savignyi | 23.47 | 3e-25 | 114 |
| LLPS-Pes-1861 | Pelodiscus sinensis | 23.47 | 6e-28 | 124 |
| LLPS-Orl-0275 | Oryzias latipes | 23.42 | 1e-27 | 123 |
| LLPS-Ova-0670 | Ovis aries | 23.39 | 1e-24 | 113 |
| LLPS-Caj-0003 | Callithrix jacchus | 23.38 | 2e-24 | 112 |
| LLPS-Xet-0250 | Xenopus tropicalis | 23.37 | 4e-22 | 105 |
| LLPS-Scm-0422 | Scophthalmus maximus | 23.36 | 4e-24 | 112 |
| LLPS-Anc-1755 | Anolis carolinensis | 23.28 | 1e-28 | 125 |
| LLPS-Aim-0862 | Ailuropoda melanoleuca | 23.23 | 2e-24 | 112 |
| LLPS-Mum-0137 | Mus musculus | 23.21 | 1e-25 | 116 |
| LLPS-Aon-0144 | Aotus nancymaae | 23.2 | 4e-24 | 111 |
| LLPS-Sus-0475 | Sus scrofa | 22.84 | 6e-22 | 105 |
| LLPS-Caf-0271 | Canis familiaris | 22.84 | 5e-24 | 111 |
| LLPS-Tut-0886 | Tursiops truncatus | 22.66 | 7e-25 | 114 |
| LLPS-Chc-0041 | Chondrus crispus | 22.35 | 9e-07 | 56.2 |
| LLPS-Drm-0122 | Drosophila melanogaster | 21.88 | 2e-17 | 90.9 |
| LLPS-Osl-0026 | Ostreococcus lucimarinus | 21.36 | 6e-23 | 108 |
| LLPS-Cae-0308 | Caenorhabditis elegans | 20.3 | 3e-06 | 54.7 |