LLPS-Orn-2003
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Casc3, exon junction complex subunit |
Ensembl Gene: | ENSONIG00000009337.1 |
Ensembl Protein: | ENSONIP00000011736.1 |
Organism: | Oreochromis niloticus |
Taxa ID: | 8128 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Nucleolus, P-body, Stress granule, Chromatoid body | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSONIT00000011745.1 | ENSONIP00000011736.1 |
Ensembl | ENSONIT00000011744.1 | ENSONIP00000011735.1 |
UniProt | I3JS90, I3JS90_ORENI | |
GeneBank | AERX01008099 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MADRRRRRRR ASQDSEDDDE SGSGSDSGRS GSPSSKPRGR EPDPAEPTAS RVPAKSDVES 60 61 ECESEDGVGE AVLSDYDSAD PEDNGSHSEG VEEEEEAEQY SDEEAPAAAS EPQPPTTDGP 120 121 VEGAQGEEEE GGEAEEEEEA VGRSKEESKA EEKGNLAGER QSGDGQESTD DPETKAGGKP 180 181 GQQLDDDEDR KNPAYIPRKG LFFEHDVRGH AQEEERPKGR NRKLWKDEGR WEHDKFREEE 240 241 QAPKSREELI AIYGYDIRNG GGPGDRGYRQ RRPRPTSSPS RDKRWRDGGG ERPVRSWQNR 300 301 GGGGGGLNRG GAPPPSSVHP SSSSSSSAQR SGIPSRPPPS RTRPPQSNLH PPPPSHYRNN 360 361 ESNAPLVHHR ERTGPRAQAE PTGEKGGVRG GRGGRAPSVV IEDITVSQGG VTEQELSVGA 420 421 VTPAASPQPG GYQSTSPRRQ QEQRGGMDRS ASGLAASSSG SDPSLQSSAA ATNREASPPA 480 481 ERPVERKSYS LARRTRSRPA DLGSKQASVE ESVAGGNNSS PSNVGGKSWS GGGDAPSQAG 540 541 GGVTELDQDV ARLNLARQSW SPTSYMRSEM RGLPNPLHMP SGPPQFSGIE EMGVGNNRAK 600 601 RYSSQRQRAV PEPAPPMHLG VMEGHYYEPM SYQGPIYAHG DSPAPMPPQG MLVQPEMHIP 660 661 HPGLHPHQSG GPIANPALYG GPPVSLSPGQ PQQLLPPPFY PPPGVMTFPY PTMYPNPQGQ 720 721 TQVTYGGVTY YDTVQQQAQP KPSPPRRTSQ PVTVKPPPPE VPFASE 766 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGACC GGCGGCGAAG GAGGAGGCGC GCGTCCCAGG ACAGCGAGGA TGACGATGAG 60 61 TCCGGGTCGG GTTCGGACAG CGGGAGGTCC GGGTCCCCGT CCTCGAAGCC CCGGGGACGG 120 121 GAGCCCGACC CGGCGGAACC GACCGCGAGC CGGGTCCCGG CGAAGAGCGA CGTGGAGTCC 180 181 GAGTGTGAGA GCGAAGACGG CGTTGGAGAA GCCGTCCTCT CAGATTACGA CAGCGCCGAC 240 241 CCCGAGGACA ACGGATCGCA TTCAGAGGGA GAGGAGGAGG AGGGCGGAGA AGCTGAGGAG 300 301 GAAGAAGAGG CTGTAGGGCG GAGCAAAGAG GAGAGCAAAG CAGAGGAGAA GGGAAACCTA 360 361 GCAGGAGAGC GACAGAGCGG AGACGGACAG GAGTCGACGG ACGACCCGGA GACGAAGGCG 420 421 GGGGGCAAAC CGGGGCAGCA GCTGGACGAC GACGAGGACA GGAAGAACCC GGCGTACATC 480 481 CCAAGGAAGG GTCTGTTCTT CGAACACGAC GTCAGGGGGC ATGCTCAGGA GGAGGAGAGG 540 541 CCAAAAGGCA GAAACAGGAA GTTGTGGAAA GACGAGGGCC GCTGGGAGCA CGACAAGTTC 600 601 AGGGAGGAGG AGCAGGCGCC GAAGAGCCGC GAGGAGCTGA TCGCAATCTA TGGTTACGAC 660 661 ATCCGAAATG GCGGCGGCCC CGGAGACCGA GGGTACAGAC AGCGGAGGCC CAGACCGACT 720 721 TCGTCTCCCA GCAGAGACAA ACGGTGGAGA GATGGAGGAG GAGAGCGGCC CGTCCGGTCC 780 781 TGGCAGAACA GGGGAGGAGG GGGAGGAGGT CTGAACCGAG GAGGAGCTCC TCCACCTTCA 840 841 TCTGTCCACC CCTCCTCTTC GTCGTCATCC TCTGCACAGC GAAGCGGCAT CCCCTCCAGA 900 901 CCTCCTCGGG AAAAGGGAGG TGTCAGAGGA GGGCGAGGAG GAAGGGCACC CTCTGTGGTC 960 961 ATTGAGGACA TTACATCCAC TTCACCGAGA CGCCAGCAGG AGCAGCGAGG TGGCATGGAC 1020 1021 AGATCTGCGT CAGGACTGGC CGCTTCCTCT TCCGGCTCCG ACCCTTCCCT TCAGTCGTCA 1080 1081 GCAGCAGCGA CCAATCGGGA AGCTTCCCCT CCCGCCGAGC GGCCAGTGGA GCGCAAGTCT 1140 1141 TACTCACTGG CTCGCAGGAC TCGCTCGCGT CCCGCAGACC TGGGCAGTAA ACAGGCGTCT 1200 1201 GTGGAGGAGT CCGTTGCCGG GGGCAACAAC TCTTCTCCTA GCAATGTGGG GGGAAAGAGC 1260 1261 TGGTCGGGTG GAGGCGACGC ACCGAGCCAG GCGGGAGGAG GCGTGACGGA GCTGGACCAG 1320 1321 GACGTGGCCC GGCTCAATCT GGCCAGGCAG AGCTGGAGCC CGACCTCGTA CATGCGGTCT 1380 1381 GAGATGAGAG GCCTTCCTAA CCCCCTGCAC ATGCCCAGCG GCCCGCCACA GTTCTCCGGC 1440 1441 ATCGAGGAGA TGGGTGTCGG CAACAACCGG GCCAAACGCT ACTCCTCCCA GCGACAGAGA 1500 1501 GCCGTGCCCG AGCCGGCGCC GCCTATGCAC CTGGGAGTGA TGGAGGGACA CTACTATGAG 1560 1561 CCCATGTCGT ACCAGGGACC AATCTATGCC CACGGGGATA GCCCCGCCCC CATGCCACCA 1620 1621 CAGGGCATGC TGGTGCAGCC TGAGATGCAC ATCCCGCATC CTGGTCTTCA TCCCCACCAA 1680 1681 TCAGGAGGCC CCATCGCTAA CCCCGCCCTA TACGGAGGCC CACCAGTGTC TCTGTCACCA 1740 1741 GGGCAACCAC AGCAACTGCT GCCACCGCCT TTCTACCCTC CACCGGGGGT CATGACCTTC 1800 1801 CCCTACCCCA CCATGTACCC AAACCCACAG GGTCAGACTC AGGTGACCTA CGGAGGCGTG 1860 1861 ACGTACTACG ACACGGTGCA GCAGCAGGCC CAGCCCAAGC CTTCGCCCCC CCGCCGCACA 1920 1921 TCCCAGCCCG TCACCGTCAA GCCCCCCCCT CCAGAGGTGC CCTTTGCCTC AGAGTGA 1977 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Scm-1187 | Scophthalmus maximus | 91.43 | 4e-09 | 64.3 |
LLPS-Gaa-1463 | Gasterosteus aculeatus | 88.39 | 6e-78 | 256 |
LLPS-Orl-0113 | Oryzias latipes | 86.11 | 8e-66 | 238 |
LLPS-Mea-2001 | Mesocricetus auratus | 81.63 | 7e-18 | 92.0 |
LLPS-Tag-0086 | Taeniopygia guttata | 79.45 | 1e-27 | 121 |
LLPS-Cap-0241 | Cavia porcellus | 77.19 | 3e-46 | 179 |
LLPS-Xim-2835 | Xiphophorus maculatus | 76.48 | 4e-143 | 446 |
LLPS-Anc-0731 | Anolis carolinensis | 76.27 | 7e-48 | 184 |
LLPS-Xet-3491 | Xenopus tropicalis | 75.65 | 2e-45 | 177 |
LLPS-Fec-4388 | Felis catus | 74.59 | 1e-47 | 184 |
LLPS-Mod-2025 | Monodelphis domestica | 74.59 | 1e-47 | 184 |
LLPS-Rhb-0936 | Rhinopithecus bieti | 74.59 | 2e-47 | 184 |
LLPS-Orc-1516 | Oryctolagus cuniculus | 74.59 | 2e-47 | 183 |
LLPS-Eqc-2666 | Equus caballus | 74.59 | 3e-47 | 183 |
LLPS-Caf-0549 | Canis familiaris | 74.59 | 1e-47 | 183 |
LLPS-Ict-4080 | Ictidomys tridecemlineatus | 74.59 | 1e-47 | 184 |
LLPS-Chs-2423 | Chlorocebus sabaeus | 74.59 | 2e-47 | 183 |
LLPS-Maf-2052 | Macaca fascicularis | 74.59 | 2e-47 | 183 |
LLPS-Sus-2002 | Sus scrofa | 74.59 | 9e-48 | 183 |
LLPS-Cea-1085 | Cercocebus atys | 74.59 | 2e-47 | 183 |
LLPS-Fud-1017 | Fukomys damarensis | 74.59 | 7e-48 | 184 |
LLPS-Bot-0316 | Bos taurus | 74.59 | 1e-47 | 184 |
LLPS-Ere-0298 | Erinaceus europaeus | 74.59 | 4e-48 | 182 |
LLPS-Ova-1428 | Ovis aries | 74.59 | 2e-47 | 184 |
LLPS-Aim-3655 | Ailuropoda melanoleuca | 74.59 | 1e-47 | 183 |
LLPS-Mup-0310 | Mustela putorius furo | 74.59 | 1e-47 | 183 |
LLPS-Caj-0737 | Callithrix jacchus | 73.85 | 5e-49 | 187 |
LLPS-Hos-0037 | Homo sapiens | 73.77 | 9e-47 | 181 |
LLPS-Pap-0002 | Pan paniscus | 73.77 | 1e-46 | 181 |
LLPS-Loa-1381 | Loxodonta africana | 73.77 | 1e-46 | 181 |
LLPS-Mum-1640 | Mus musculus | 73.6 | 1e-48 | 186 |
LLPS-Ran-2396 | Rattus norvegicus | 73.6 | 6e-49 | 187 |
LLPS-Icp-0818 | Ictalurus punctatus | 73.45 | 1e-75 | 266 |
LLPS-Tar-1501 | Takifugu rubripes | 73.05 | 9e-88 | 299 |
LLPS-Sah-2050 | Sarcophilus harrisii | 73.02 | 2e-48 | 185 |
LLPS-Meg-1398 | Meleagris gallopavo | 72.95 | 5e-48 | 184 |
LLPS-Fia-2899 | Ficedula albicollis | 72.95 | 2e-47 | 182 |
LLPS-Gaga-0599 | Gallus gallus | 72.95 | 2e-47 | 182 |
LLPS-Myl-2475 | Myotis lucifugus | 72.95 | 3e-45 | 177 |
LLPS-Mam-3769 | Macaca mulatta | 72.31 | 1e-47 | 184 |
LLPS-Mal-2625 | Mandrillus leucophaeus | 72.31 | 9e-48 | 183 |
LLPS-Paa-3326 | Papio anubis | 72.31 | 2e-47 | 183 |
LLPS-Otg-1181 | Otolemur garnettii | 72.22 | 9e-47 | 181 |
LLPS-Urm-2105 | Ursus maritimus | 72.13 | 4e-44 | 172 |
LLPS-Poa-2192 | Pongo abelii | 71.54 | 1e-46 | 181 |
LLPS-Nol-4198 | Nomascus leucogenys | 71.54 | 8e-47 | 181 |
LLPS-Gog-4356 | Gorilla gorilla | 71.54 | 8e-47 | 181 |
LLPS-Pof-1369 | Poecilia formosa | 70.54 | 2e-89 | 303 |
LLPS-Dar-1885 | Danio rerio | 69.11 | 1e-70 | 252 |
LLPS-Ten-0967 | Tetraodon nigroviridis | 68.98 | 8e-114 | 367 |
LLPS-Asm-2609 | Astyanax mexicanus | 67.05 | 1e-74 | 263 |
LLPS-Scf-0524 | Scleropages formosus | 65.96 | 3e-63 | 231 |
LLPS-Leo-1092 | Lepisosteus oculatus | 65.64 | 7e-62 | 227 |
LLPS-Aon-1734 | Aotus nancymaae | 62.99 | 4e-35 | 146 |
LLPS-Ora-2055 | Ornithorhynchus anatinus | 60.33 | 1e-30 | 132 |
LLPS-Lac-0850 | Latimeria chalumnae | 51.92 | 6e-28 | 124 |
LLPS-Pes-0233 | Pelodiscus sinensis | 47.65 | 1e-59 | 214 |
LLPS-Pat-2643 | Pan troglodytes | 47.04 | 9e-47 | 179 |
LLPS-Cii-0159 | Ciona intestinalis | 43.0 | 1e-10 | 68.2 |
LLPS-Cae-1203 | Caenorhabditis elegans | 38.04 | 2e-10 | 68.2 |
LLPS-Man-3084 | Macaca nemestrina | 36.67 | 2e-08 | 59.3 |