DrLLPS - Data resource of LLPS

LLPS-Orl-2476
rnf4

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Uncharacterized protein
Gene Name:	rnf4
Ensembl Gene:	ENSORLG00000020573.2
Ensembl Protein:	ENSORLP00000025484.2
Organism:	Oryzias latipes
Taxa ID:	8090
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
PML nuclear body	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-2691	Q9QZS2	Regulator	PML nuclear body	40.41	3e-35	129
Homo sapiens	LLPS-Hos-2411	P78317	Regulator	PML nuclear body	38.46	3e-32	120

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	ENSORLT00000025485.2	ENSORLP00000025484.2
UniProt		H2N215, H2N215_ORYLA

▼ SEQUENCE

Protein Sequence (FASTA)
1 MCFQAQRKRR PTESPRVSRP SIKTSRVAQS RRAVNRGTHT GADSAPPAET IDVMDNTDDG 60 61 VEEVVDLTCE GAEAAVVDLT NNNDSVLVTH PQSSTVPAGE SYVLSSDEDE DTPLFSSAAT 120 121 AAAAHASRST PGLISCPVCL DLYSEIVGSG RLVVSTKCGH VFCSQCLRDS LTSSHTCPTC 180 181 RKRLTSRQYH PLYV 194
Nucleotide CDS Sequence (FASTA)
1 ATGTGTTTTC AGGCCCAGAG GAAGAGAAGG CCCACCGAAA GTCCTCGGGT CTCCAGGCCC 60 61 AGCATCAAGA CCAGCAGAGT TGCTCAATCC AGGAGAGCGG TCAACCGGGG GACTCATACC 120 121 GGTGCAGACT CCGCTCCCCC TGCCGAGACC ATCGACGTGA TGGACAACAC GGACGACGGT 180 181 GTGGAGGAGG TGGTGGACCT TACCTGTGAG GGAGCAGAAG CTGCTGTGGT GGACCTGACC 240 241 AACAACAACG ACTCTGTGCT GGTAACACAT CCTCAGAGCA GCACAGTCCC TGCAGGTGAG 300 301 AGCTACGTCC TGAGCAGTGA TGAAGATGAG GACACGCCCC TTTTCAGCAG CGCCGCCACC 360 361 GCGGCGGCCG CACATGCATC AAGGTCGACG CCAGGCCTGA TCAGCTGTCC GGTCTGTCTG 420 421 GATCTGTACT CTGAGATTGT CGGGAGTGGC CGGTTGGTCG TCTCCACAAA GTGTGGTCAC 480 481 GTCTTCTGCA GCCAGTGTCT AAGAGACTCT CTGACCTCCT CGCACACCTG CCCCACCTGC 540 541 AGGAAGAGAC TCACCTCCCG ACAGTACCAC CCCCTCTACG TCTGA 585

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Pof-0639	Poecilia formosa	71.13	3e-82	249
LLPS-Xim-0412	Xiphophorus maculatus	70.41	2e-80	244
LLPS-Man-3064	Macaca nemestrina	66.67	4e-27	107
LLPS-Ere-0181	Erinaceus europaeus	64.62	2e-27	106
LLPS-Gaa-0843	Gasterosteus aculeatus	63.96	5e-72	223
LLPS-Tar-1091	Takifugu rubripes	62.37	4e-67	211
LLPS-Scf-2394	Scleropages formosus	61.38	1e-48	163
LLPS-Leo-2918	Lepisosteus oculatus	56.17	1e-50	168
LLPS-Dar-0394	Danio rerio	55.49	1e-48	163
LLPS-Xet-2431	Xenopus tropicalis	52.03	4e-36	130
LLPS-Cii-0190	Ciona intestinalis	49.18	1e-14	73.6
LLPS-Prp-1444	Prunus persica	48.48	3e-09	58.2
LLPS-Cis-1407	Ciona savignyi	47.54	4e-14	71.6
LLPS-Anc-0539	Anolis carolinensis	46.67	2e-38	137
LLPS-Tag-0772	Taeniopygia guttata	46.67	4e-40	141
LLPS-Icp-2955	Ictalurus punctatus	46.43	1e-13	70.5
LLPS-Dio-2184	Dipodomys ordii	46.21	3e-33	124
LLPS-Drm-1133	Drosophila melanogaster	45.16	1e-12	68.9
LLPS-Fia-1674	Ficedula albicollis	44.67	1e-39	140
LLPS-Anp-1650	Anas platyrhynchos	44.67	1e-38	137
LLPS-Brd-0524	Brachypodium distachyon	44.26	3e-10	61.2
LLPS-Meg-1984	Meleagris gallopavo	44.22	3e-39	139
LLPS-Osl-0418	Ostreococcus lucimarinus	44.07	4e-10	59.7
LLPS-Maf-2232	Macaca fascicularis	44.03	1e-33	124
LLPS-Pes-1087	Pelodiscus sinensis	43.5	2e-39	139
LLPS-Loa-1664	Loxodonta africana	43.14	4e-36	131
LLPS-Mod-1725	Monodelphis domestica	43.09	4e-36	130
LLPS-Met-2469	Medicago truncatula	42.86	5e-11	62.4
LLPS-Gaga-2683	Gallus gallus	42.64	2e-39	139
LLPS-Hov-0932	Hordeum vulgare	42.62	3e-10	61.2
LLPS-Sus-1437	Sus scrofa	42.56	1e-37	134
LLPS-Urm-2375	Ursus maritimus	42.56	5e-38	135
LLPS-Aim-3098	Ailuropoda melanoleuca	42.49	2e-37	134
LLPS-Cap-4554	Cavia porcellus	42.35	2e-35	129
LLPS-Gog-0311	Gorilla gorilla	42.05	4e-36	130
LLPS-Nol-1970	Nomascus leucogenys	42.05	4e-36	130
LLPS-Hos-2411	Homo sapiens	42.05	4e-36	130
LLPS-Pap-2814	Pan paniscus	42.05	3e-36	131
LLPS-Pat-2357	Pan troglodytes	42.05	4e-36	130
LLPS-Fec-1491	Felis catus	42.05	1e-36	132
LLPS-Ict-2575	Ictidomys tridecemlineatus	41.97	2e-35	129
LLPS-Ova-0492	Ovis aries	41.92	2e-38	137
LLPS-Ran-0635	Rattus norvegicus	41.84	1e-35	129
LLPS-Caj-0710	Callithrix jacchus	41.54	1e-35	129
LLPS-Chs-2444	Chlorocebus sabaeus	41.54	7e-37	132
LLPS-Aon-0309	Aotus nancymaae	41.54	4e-36	130
LLPS-Cas-2516	Carlito syrichta	41.54	8e-36	130
LLPS-Rhb-3763	Rhinopithecus bieti	41.54	4e-35	128
LLPS-Mup-0580	Mustela putorius furo	41.41	7e-37	133
LLPS-Bot-1596	Bos taurus	41.36	4e-39	138
LLPS-Eqc-3165	Equus caballus	41.36	2e-35	129
LLPS-Orc-0842	Oryctolagus cuniculus	41.33	6e-37	133
LLPS-Hea-0820	Helianthus annuus	41.27	2e-09	58.5
LLPS-Paa-2835	Papio anubis	41.03	2e-35	129
LLPS-Mal-1906	Mandrillus leucophaeus	41.03	9e-35	127
LLPS-Cea-2261	Cercocebus atys	41.03	2e-35	129
LLPS-Poa-1758	Pongo abelii	41.03	2e-35	129
LLPS-Mam-1209	Macaca mulatta	41.03	2e-35	129
LLPS-Orgl-1000	Oryza glumaepatula	40.98	2e-09	59.3
LLPS-Orni-2099	Oryza nivara	40.98	2e-09	59.3
LLPS-Orb-0536	Oryza barthii	40.98	2e-09	59.3
LLPS-Ori-1354	Oryza indica	40.98	2e-09	59.3
LLPS-Org-1932	Oryza glaberrima	40.98	2e-09	59.3
LLPS-Tru-1581	Triticum urartu	40.98	2e-10	62.0
LLPS-Orm-0999	Oryza meridionalis	40.98	2e-09	59.7
LLPS-Orr-0617	Oryza rufipogon	40.98	1e-09	59.3
LLPS-Ors-0618	Oryza sativa	40.98	1e-09	59.3
LLPS-Orp-0589	Oryza punctata	40.98	2e-09	58.9
LLPS-Otg-3064	Otolemur garnettii	40.93	3e-35	129
LLPS-Caf-1156	Canis familiaris	40.82	1e-34	127
LLPS-Mum-2691	Mus musculus	40.41	3e-35	129
LLPS-Fud-0934	Fukomys damarensis	40.0	1e-36	132
LLPS-Myl-0355	Myotis lucifugus	39.9	1e-35	129
LLPS-Sot-0135	Solanum tuberosum	39.68	7e-08	54.3
LLPS-Sol-1630	Solanum lycopersicum	39.68	3e-08	55.1
LLPS-Nia-0331	Nicotiana attenuata	39.68	4e-08	55.1
LLPS-Tra-1253	Triticum aestivum	39.66	8e-07	52.4
LLPS-Lep-0310	Leersia perrieri	39.34	2e-09	58.5
LLPS-Php-1943	Physcomitrella patens	39.34	6e-10	60.5
LLPS-Mua-0588	Musa acuminata	39.34	9e-10	60.5
LLPS-Zem-1298	Zea mays	39.34	3e-10	61.6
LLPS-Sob-1369	Sorghum bicolor	39.34	3e-10	61.2
LLPS-Orbr-1583	Oryza brachyantha	39.34	9e-09	57.8
LLPS-Sah-2623	Sarcophilus harrisii	39.3	1e-37	135
LLPS-Mae-1228	Manihot esculenta	38.71	1e-07	53.5
LLPS-Pot-1404	Populus trichocarpa	38.71	4e-08	55.1
LLPS-Arl-1193	Arabidopsis lyrata	37.7	1e-09	58.5
LLPS-Dac-2470	Daucus carota	37.7	5e-08	54.7
LLPS-Viv-2039	Vitis vinifera	37.7	5e-09	58.2
LLPS-Art-2705	Arabidopsis thaliana	37.7	2e-09	58.2
LLPS-Cym-0921	Cyanidioschyzon merolae	36.21	9e-06	49.3
LLPS-Bro-0874	Brassica oleracea	36.07	3e-09	57.8
LLPS-Amt-2099	Amborella trichopoda	35.59	1e-08	56.2
LLPS-Sei-0187	Setaria italica	34.43	1e-08	57.0
LLPS-Brn-2008	Brassica napus	34.43	2e-08	55.8
LLPS-Brr-0800	Brassica rapa	34.43	2e-08	55.8
LLPS-Phv-0625	Phaseolus vulgaris	32.26	8e-08	53.5
LLPS-Via-0094	Vigna angularis	30.65	1e-07	54.3
LLPS-Gor-1648	Gossypium raimondii	26.49	4e-09	57.4

LLPS-Orl-2476rnf4

Protein Sequence

Nucleotide Sequence

LLPS-Orl-2476
rnf4