LLPS-Zem-1298
100502508
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | RING/U-box superfamily protein |
| Gene Name: | 100502508, ZEAMMB73_Zm00001d042350 |
| Ensembl Gene: | Zm00001d042350 |
| Ensembl Protein: | Zm00001d042350_P003 |
| Organism: | Zea mays |
| Taxa ID: | 4577 |
| LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Zm00001d042350_T003 | Zm00001d042350_P003 |
| Ensembl | Zm00001d042350_T004 | Zm00001d042350_P004 |
| Ensembl | Zm00001d042350_T002 | Zm00001d042350_P002 |
| Ensembl | Zm00001d042350_T001 | Zm00001d042350_P001 |
| Ensembl | Zm00001d042350_T005 | Zm00001d042350_P005 |
| UniProt | C4JC41, C4JC41_MAIZE | |
| GeneBank | CM007649, BT088388 | ACR38741.1, ONM35128.1 |
| RefSeq | NM_001196986.1 | NP_001183915.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MLVIIAEVFV NIYFFSIDFA RASIFYCNTM NSHGAGSHSR LLDLNYPPAE GAGEGASRFS 60 61 SIPVSHREGS SSMPVQHIQA SSSTPPATGE PRIGMRSCPI DVEAIDDDAV IYSSRPLPRA 120 121 RQQLTTTESI TIIIDDDSET NLETAGDALD EHVNLLLSLG IERSHEPTSA TNTFPGISMV 180 181 DTPKVNTFKW IQVPPEPVKE VPKEPKLSCP ICMNEITEAA STVCGHIFCQ PCIKAAIKAQ 240 241 KKCPTCRRKL TPRQQHRVYL PSP 263 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCTTGTAA TCATTGCTGA AGTTTTTGTG AACATATATT TTTTTTCAAT CGATTTTGCT 60 61 CGAGCCAGTA TCTTTTATTG CAACACCATG AACTCCCATG GTGCTGGTTC GCATTCACGG 120 121 CTTTTGGACC TCAACTATCC CCCTGCTGAA GGGGCTGGTG AGGGGGCTTC ACGTTTCAGC 180 181 AGTATCCCTG TCTCTCATAG AGAGGGTTCA AGCAGCATGC CTGTACAACA CATCCAGGCT 240 241 TCGAGTAGTA CACCACCGGC TACTGGTGAG CCTCGCATTG GTATGCGTAG TTGCCCCATC 300 301 GATGTGGAAG CCATCGATGA TGATGCCGTT ATCTATTCTT CAAGACCACT GCCTCGAGCA 360 361 AGACAGCAGT TGACCACGAC AGAAAGTATT ACTATCATAA TAGATGATGA TTCCGAAACA 420 421 AACCTAGAAA CAGCAGGCGA TGCTCTTGAC GAGCATGTGA ACTTACTGCT ATCTCTGGGC 480 481 ATAGAACGCT CGCATGAGCC TACAAGTGCA ACCAACACCT TCCCTGGAAT AAGCATGGTG 540 541 GACACACCAA AAGTAAACAC CTTCAAGTGG ATCCAGGTGC CTCCTGAACC TGTGAAGGAG 600 601 GTTCCGAAGG AACCGAAGCT CAGCTGCCCG ATCTGTATGA ACGAGATAAC CGAAGCGGCG 660 661 TCGACCGTAT GCGGTCACAT TTTCTGCCAG CCGTGCATCA AGGCTGCCAT TAAGGCCCAG 720 721 AAGAAGTGCC CTACCTGCCG GAGGAAGCTC ACTCCAAGAC AGCAACACCG GGTGTACCTC 780 781 CCATCGCCTT AG 792 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sob-1369 | Sorghum bicolor | 75.82 | 1e-78 | 244 |
| LLPS-Sei-0187 | Setaria italica | 71.76 | 7e-76 | 240 |
| LLPS-Mua-0588 | Musa acuminata | 70.91 | 6e-11 | 65.5 |
| LLPS-Amt-2099 | Amborella trichopoda | 70.37 | 2e-09 | 60.1 |
| LLPS-Met-2469 | Medicago truncatula | 64.91 | 2e-07 | 53.1 |
| LLPS-Bro-0874 | Brassica oleracea | 62.5 | 7e-08 | 55.5 |
| LLPS-Prp-2173 | Prunus persica | 62.5 | 3e-07 | 53.5 |
| LLPS-Nia-0331 | Nicotiana attenuata | 62.5 | 6e-08 | 55.8 |
| LLPS-Gor-1648 | Gossypium raimondii | 62.5 | 7e-08 | 55.5 |
| LLPS-Sot-0135 | Solanum tuberosum | 62.5 | 7e-08 | 55.5 |
| LLPS-Via-0094 | Vigna angularis | 62.5 | 4e-07 | 53.9 |
| LLPS-Hea-0820 | Helianthus annuus | 62.5 | 9e-08 | 55.5 |
| LLPS-Sol-1630 | Solanum lycopersicum | 62.5 | 5e-08 | 55.8 |
| LLPS-Phv-0625 | Phaseolus vulgaris | 60.71 | 2e-07 | 53.5 |
| LLPS-Brr-0800 | Brassica rapa | 60.71 | 4e-07 | 53.5 |
| LLPS-Brn-2008 | Brassica napus | 60.71 | 4e-07 | 53.5 |
| LLPS-Php-1943 | Physcomitrella patens | 59.26 | 4e-07 | 53.9 |
| LLPS-Tra-1355 | Triticum aestivum | 58.93 | 4e-07 | 53.5 |
| LLPS-Dac-2048 | Daucus carota | 58.18 | 2e-08 | 57.0 |
| LLPS-Pot-2674 | Populus trichocarpa | 55.56 | 1e-06 | 52.4 |
| LLPS-Art-2705 | Arabidopsis thaliana | 55.36 | 2e-06 | 50.8 |
| LLPS-Arl-1193 | Arabidopsis lyrata | 55.36 | 1e-06 | 51.6 |
| LLPS-Brd-0524 | Brachypodium distachyon | 55.02 | 6e-32 | 124 |
| LLPS-Viv-2039 | Vitis vinifera | 54.55 | 2e-08 | 57.8 |
| LLPS-Tru-1581 | Triticum urartu | 54.35 | 6e-31 | 121 |
| LLPS-Lep-0310 | Leersia perrieri | 51.77 | 2e-31 | 122 |
| LLPS-Orgl-1000 | Oryza glumaepatula | 51.05 | 3e-32 | 124 |
| LLPS-Orni-2099 | Oryza nivara | 51.05 | 4e-32 | 124 |
| LLPS-Orb-0536 | Oryza barthii | 51.05 | 4e-32 | 124 |
| LLPS-Ors-0618 | Oryza sativa | 50.65 | 8e-31 | 120 |
| LLPS-Orr-0617 | Oryza rufipogon | 50.63 | 3e-32 | 124 |
| LLPS-Hov-0932 | Hordeum vulgare | 48.28 | 5e-15 | 76.3 |
| LLPS-Org-1932 | Oryza glaberrima | 47.84 | 6e-31 | 120 |
| LLPS-Ori-1354 | Oryza indica | 47.84 | 6e-31 | 120 |
| LLPS-Orm-0999 | Oryza meridionalis | 47.53 | 5e-30 | 120 |
| LLPS-Orbr-1583 | Oryza brachyantha | 45.98 | 5e-24 | 102 |
| LLPS-Orp-0589 | Oryza punctata | 44.18 | 1e-21 | 95.5 |