LLPS-Ori-1885
OsI_28775
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Signal recognition particle subunit SRP68 |
| Gene Name: | OsI_28775 |
| Ensembl Gene: | BGIOSGA027196 |
| Ensembl Protein: | BGIOSGA027196-PA |
| Organism: | Oryza indica |
| Taxa ID: | 39946 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nuclear speckle, Nucleolus, Stress granule | Predicted from orthologs | (View) |
▼ FUNCTION
| Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | BGIOSGA027196-TA | BGIOSGA027196-PA |
| UniProt | B8B9Q7, B8B9Q7_ORYSI | |
| GeneBank | CM000133 | EEC83366.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSKPADQPPP SDMEVDAAAE EKPLVRFSIN VLELMREAQM QHGLRHGDYT RYRRYCTARL 60 61 RRLYKSLKFL HGRGKYTKRN ITESTVTDVR FLHIVFYMAE RAWSHAMEKK TAGPNAQQRI 120 121 YMLGRFRKAV KWATLFSHLC SLKGDSRTSL EAEAYASYMK GTLLFEQEKN IEAAMTISRT 180 181 PGGSALQAHE LLDLEKEGPA YDLFKAKIEV RGQMGAVLSE TRSQQAASMT EFSWLGRRFP 240 241 ITNAKTRVSI LKAQQLEKDL NGANTESVPA DKKLGIFDKI FSAYHDARSC IRNDLASAGN 300 301 AENIRDELNG LDKAVSAVLG FRTIERNQLL VSIAKSKFTK HRDEKNEKIT KPEELVRLYD 360 361 LLIQNTTDLT DLISSGRDKN KEENTFIQEY ELKSLAFRAE RCFYLAKSYS SAGKRAEAYA 420 421 LFCHARSITD SALQQLTNSP DKALVQDLKA LSDSCRSNSF IEHATGIMEE ENVPERLSKG 480 481 VSTLSLGERK EAFLLDMLES YESALGESNT KTPCRIARFP PPFQSVPCNP IVLDMAYNAI 540 541 EFPNIENRMK KEKKGLLSRF WG 562 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCGAAGC CCGCGGACCA GCCCCCGCCG TCGGACATGG AGGTCGACGC CGCGGCCGAG 60 61 GAGAAGCCGC TCGTCAGGTT CTCCATCAAC GTGCTGGAGC TCATGAGGGA GGCGCAGATG 120 121 CAGCACGGCC TCCGCCACGG CGACTACACG CGGTACAGGA GATACTGTAC CGCACGTCTC 180 181 AGAAGGTTAT ACAAGTCTCT CAAGTTTCTG CATGGCCGTG GTAAATATAC CAAGAGGAAT 240 241 ATAACAGAGT CAACAGTCAC AGATGTGAGG TTTCTACACA TAGTATTTTA TATGGCTGAG 300 301 AGAGCATGGA GTCATGCGAT GGAAAAGAAA ACTGCTGGTC CAAATGCACA ACAGCGTATC 360 361 TACATGTTAG GTAGATTTAG AAAAGCTGTC AAATGGGCAA CGCTTTTTTC ACATTTATGT 420 421 TCTCTAAAAG GAGATTCCAG GACGTCTTTG GAAGCTGAGG CATATGCTTC ATACATGAAA 480 481 GGTACCTTGC TGTTTGAGCA AGAGAAGAAC ATAGAGGCAG CAATGACAAT TTCAAGAACA 540 541 CCAGGCGGAT CAGCTTTGCA AGCACATGAA CTACTAGATC TGGAAAAGGA GGGGCCTGCT 600 601 TATGATCTTT TCAAGGCTAA GATTGAGGTG AGGGGGCAGA TGGGGGCTGT ATTATCTGAG 660 661 ACAAGATCGC AGCAGGCAGC TTCCATGACC GAGTTTAGCT GGCTTGGTCG CAGATTTCCA 720 721 ATTACTAATG CAAAGACCCG TGTCTCCATT TTGAAAGCTC AACAGCTGGA GAAAGACTTG 780 781 AATGGTGCAA ACACAGAATC AGTTCCAGCG GACAAAAAAC TTGGCATTTT TGACAAAATA 840 841 TTTTCTGCAT ACCATGATGC TCGGAGCTGC ATCCGCAATG ACTTGGCTTC TGCTGGCAAT 900 901 GCTGAGAATA TAAGAGATGA ATTGAATGGT CTTGACAAGG CTGTTAGTGC TGTCTTGGGA 960 961 TTCAGAACCA TTGAGCGAAA CCAATTACTC GTTAGTATTG CTAAAAGCAA GTTTACCAAG 1020 1021 CACCGGGATG AGAAGAATGA GAAAATCACA AAACCAGAAG AACTTGTTCG GTTGTATGAT 1080 1081 CTGCTTATTC AAAATACAAC AGATCTGACT GATTTAATTA GCTCAGGAAG GGATAAAAAC 1140 1141 AAGGAAGAGA ACACTTTTAT TCAGGAGTAT GAGCTGAAAA GTTTGGCTTT CCGAGCTGAG 1200 1201 AGATGTTTCT ATTTGGCAAA GTCATACAGT TCAGCCGGTA AAAGGGCTGA AGCTTACGCG 1260 1261 CTGTTTTGTC ATGCCCGTTC AATCACTGAT TCTGCACTGC AACAGCTGAC TAACAGTCCT 1320 1321 GACAAGGCCT TAGTCCAAGA TCTTAAGGCT CTTTCTGACA GCTGTAGATC CAATAGCTTC 1380 1381 ATAGAACATG CGACAGGTAT TATGGAGGAA GAGAATGTTC CTGAAAGACT TTCGAAAGGT 1440 1441 GTCTCAACAT TGTCACTTGG TGAACGAAAG GAGGCTTTCC TTCTTGATAT GCTAGAAAGC 1500 1501 TATGAATCAG CACTCGGTGA ATCAAATACC AAAACACCAT GTCGCATTGC ACGATTCCCA 1560 1561 CCTCCATTCC AATCAGTTCC GTGTAATCCT ATTGTTCTTG ATATGGCCTA CAATGCGATC 1620 1621 GAGTTCCCAA ACATTGAGAA CAGAATGAAG AAGGAGAAGA AGGGTCTTCT CAGCAGATTC 1680 1681 TGGGGCTGA 1689 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Signal recognition particle, endoplasmic reticulum targeting | |
Molecular Function | 7S RNA binding | |
Molecular Function | Endoplasmic reticulum signal peptide binding | |
Molecular Function | Signal recognition particle binding | |
Biological Process | SRP-dependent cotranslational protein targeting to membrane |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Org-2088 | Oryza glaberrima | 99.03 | 2e-66 | 218 |
| LLPS-Lep-1544 | Leersia perrieri | 98.63 | 3e-42 | 164 |
| LLPS-Orgl-0278 | Oryza glumaepatula | 92.32 | 0.0 | 1079 |
| LLPS-Orm-0705 | Oryza meridionalis | 92.15 | 0.0 | 1077 |
| LLPS-Orr-0568 | Oryza rufipogon | 91.99 | 0.0 | 1071 |
| LLPS-Orb-0087 | Oryza barthii | 91.65 | 0.0 | 1076 |
| LLPS-Orp-0397 | Oryza punctata | 90.65 | 0.0 | 1060 |
| LLPS-Ors-0314 | Oryza sativa | 89.04 | 0.0 | 771 |
| LLPS-Orni-0525 | Oryza nivara | 88.85 | 0.0 | 1065 |
| LLPS-Orbr-0962 | Oryza brachyantha | 87.54 | 0.0 | 1019 |
| LLPS-Brd-1686 | Brachypodium distachyon | 82.46 | 0.0 | 947 |
| LLPS-Hov-1908 | Hordeum vulgare | 79.9 | 0.0 | 937 |
| LLPS-Sei-1896 | Setaria italica | 79.14 | 0.0 | 927 |
| LLPS-Tra-1516 | Triticum aestivum | 78.64 | 0.0 | 930 |
| LLPS-Sob-1307 | Sorghum bicolor | 78.48 | 0.0 | 905 |
| LLPS-Zem-1473 | Zea mays | 77.11 | 0.0 | 895 |
| LLPS-Tru-0579 | Triticum urartu | 76.23 | 0.0 | 857 |
| LLPS-Mua-0555 | Musa acuminata | 66.83 | 0.0 | 769 |
| LLPS-Thc-0362 | Theobroma cacao | 64.72 | 0.0 | 716 |
| LLPS-Prp-0101 | Prunus persica | 63.47 | 0.0 | 726 |
| LLPS-Gor-1072 | Gossypium raimondii | 63.24 | 0.0 | 718 |
| LLPS-Viv-1550 | Vitis vinifera | 62.81 | 0.0 | 696 |
| LLPS-Cus-1684 | Cucumis sativus | 62.46 | 0.0 | 696 |
| LLPS-Brr-2305 | Brassica rapa | 62.37 | 0.0 | 682 |
| LLPS-Brn-1218 | Brassica napus | 62.33 | 0.0 | 700 |
| LLPS-Arl-0738 | Arabidopsis lyrata | 62.19 | 0.0 | 699 |
| LLPS-Bro-2135 | Brassica oleracea | 62.0 | 0.0 | 697 |
| LLPS-Art-0012 | Arabidopsis thaliana | 61.9 | 0.0 | 685 |
| LLPS-Nia-0278 | Nicotiana attenuata | 61.86 | 0.0 | 692 |
| LLPS-Mae-2680 | Manihot esculenta | 61.81 | 0.0 | 703 |
| LLPS-Amt-0375 | Amborella trichopoda | 61.79 | 0.0 | 699 |
| LLPS-Pot-1117 | Populus trichocarpa | 61.6 | 0.0 | 706 |
| LLPS-Met-0567 | Medicago truncatula | 61.3 | 0.0 | 685 |
| LLPS-Glm-0847 | Glycine max | 61.3 | 0.0 | 676 |
| LLPS-Sol-1749 | Solanum lycopersicum | 61.27 | 0.0 | 672 |
| LLPS-Vir-0580 | Vigna radiata | 60.8 | 0.0 | 678 |
| LLPS-Via-0460 | Vigna angularis | 60.63 | 0.0 | 674 |
| LLPS-Dac-0224 | Daucus carota | 60.41 | 0.0 | 640 |
| LLPS-Phv-1505 | Phaseolus vulgaris | 60.16 | 0.0 | 671 |
| LLPS-Hea-1907 | Helianthus annuus | 59.9 | 0.0 | 659 |
| LLPS-Sot-1310 | Solanum tuberosum | 59.28 | 0.0 | 588 |
| LLPS-Php-1148 | Physcomitrella patens | 46.1 | 2e-155 | 466 |
| LLPS-Anc-0559 | Anolis carolinensis | 46.05 | 1e-22 | 106 |
| LLPS-Sem-0017 | Selaginella moellendorffii | 43.73 | 7e-136 | 413 |
| LLPS-Chr-0751 | Chlamydomonas reinhardtii | 31.71 | 2e-40 | 159 |
| LLPS-Meg-0218 | Meleagris gallopavo | 31.62 | 1e-63 | 224 |
| LLPS-Aon-2535 | Aotus nancymaae | 31.53 | 2e-59 | 214 |
| LLPS-Dio-1615 | Dipodomys ordii | 31.52 | 5e-58 | 210 |
| LLPS-Tag-1648 | Taeniopygia guttata | 31.52 | 2e-58 | 211 |
| LLPS-Ova-0738 | Ovis aries | 31.47 | 7e-62 | 221 |
| LLPS-Anp-1971 | Anas platyrhynchos | 31.24 | 3e-61 | 218 |
| LLPS-Bot-0473 | Bos taurus | 31.13 | 1e-60 | 217 |
| LLPS-Caf-2003 | Canis familiaris | 31.02 | 9e-62 | 220 |
| LLPS-Xet-1776 | Xenopus tropicalis | 30.92 | 2e-61 | 218 |
| LLPS-Cis-0770 | Ciona savignyi | 30.91 | 5e-62 | 221 |
| LLPS-Gaga-2158 | Gallus gallus | 30.85 | 3e-61 | 218 |
| LLPS-Fec-2917 | Felis catus | 30.83 | 1e-59 | 214 |
| LLPS-Paa-2964 | Papio anubis | 30.82 | 3e-58 | 209 |
| LLPS-Maf-0510 | Macaca fascicularis | 30.74 | 3e-59 | 213 |
| LLPS-Chs-0639 | Chlorocebus sabaeus | 30.74 | 3e-59 | 213 |
| LLPS-Mam-3715 | Macaca mulatta | 30.74 | 3e-59 | 213 |
| LLPS-Man-2871 | Macaca nemestrina | 30.74 | 3e-59 | 213 |
| LLPS-Mal-0795 | Mandrillus leucophaeus | 30.73 | 5e-59 | 213 |
| LLPS-Gog-1357 | Gorilla gorilla | 30.73 | 4e-59 | 213 |
| LLPS-Sus-3530 | Sus scrofa | 30.73 | 2e-60 | 216 |
| LLPS-Cea-0834 | Cercocebus atys | 30.73 | 5e-59 | 213 |
| LLPS-Ran-0993 | Rattus norvegicus | 30.68 | 9e-60 | 215 |
| LLPS-Orc-0067 | Oryctolagus cuniculus | 30.63 | 1e-59 | 214 |
| LLPS-Myl-0623 | Myotis lucifugus | 30.57 | 9e-59 | 212 |
| LLPS-Pat-0000 | Pan troglodytes | 30.57 | 5e-58 | 211 |
| LLPS-Pap-0103 | Pan paniscus | 30.57 | 2e-58 | 211 |
| LLPS-Loa-1911 | Loxodonta africana | 30.56 | 2e-60 | 217 |
| LLPS-Mum-0805 | Mus musculus | 30.55 | 1e-59 | 214 |
| LLPS-Fud-1908 | Fukomys damarensis | 30.52 | 2e-60 | 217 |
| LLPS-Caj-1726 | Callithrix jacchus | 30.44 | 6e-59 | 213 |
| LLPS-Ict-0624 | Ictidomys tridecemlineatus | 30.44 | 3e-59 | 213 |
| LLPS-Rhb-2027 | Rhinopithecus bieti | 30.39 | 7e-59 | 213 |
| LLPS-Hos-0753 | Homo sapiens | 30.39 | 4e-59 | 213 |
| LLPS-Sah-0026 | Sarcophilus harrisii | 30.38 | 4e-59 | 213 |
| LLPS-Eqc-0400 | Equus caballus | 30.38 | 4e-59 | 213 |
| LLPS-Aim-2853 | Ailuropoda melanoleuca | 30.32 | 2e-59 | 214 |
| LLPS-Leo-0474 | Lepisosteus oculatus | 30.3 | 4e-62 | 221 |
| LLPS-Cap-2125 | Cavia porcellus | 30.29 | 4e-59 | 213 |
| LLPS-Mup-1548 | Mustela putorius furo | 30.15 | 8e-59 | 212 |
| LLPS-Asm-2036 | Astyanax mexicanus | 30.11 | 2e-60 | 217 |
| LLPS-Mea-2339 | Mesocricetus auratus | 30.1 | 2e-58 | 212 |
| LLPS-Dar-1171 | Danio rerio | 29.73 | 3e-58 | 210 |
| LLPS-Scf-2229 | Scleropages formosus | 29.38 | 1e-61 | 219 |
| LLPS-Poa-2444 | Pongo abelii | 29.38 | 2e-13 | 73.9 |
| LLPS-Otg-0106 | Otolemur garnettii | 29.34 | 4e-55 | 202 |
| LLPS-Gaa-0281 | Gasterosteus aculeatus | 29.28 | 4e-55 | 201 |
| LLPS-Fia-2401 | Ficedula albicollis | 29.27 | 3e-53 | 195 |
| LLPS-Cii-0364 | Ciona intestinalis | 29.22 | 4e-58 | 210 |
| LLPS-Icp-0286 | Ictalurus punctatus | 29.16 | 6e-58 | 210 |
| LLPS-Xim-0630 | Xiphophorus maculatus | 29.03 | 5e-56 | 204 |
| LLPS-Osl-0194 | Ostreococcus lucimarinus | 28.95 | 2e-27 | 119 |
| LLPS-Cas-0255 | Carlito syrichta | 28.92 | 1e-20 | 96.7 |
| LLPS-Gas-0856 | Galdieria sulphuraria | 28.87 | 3e-34 | 140 |
| LLPS-Ten-1406 | Tetraodon nigroviridis | 28.57 | 8e-54 | 197 |
| LLPS-Nol-0481 | Nomascus leucogenys | 28.55 | 4e-51 | 190 |
| LLPS-Pof-1740 | Poecilia formosa | 28.45 | 5e-56 | 204 |
| LLPS-Pes-2137 | Pelodiscus sinensis | 28.44 | 3e-51 | 189 |
| LLPS-Chc-0780 | Chondrus crispus | 28.35 | 2e-31 | 129 |
| LLPS-Lac-0596 | Latimeria chalumnae | 28.24 | 8e-57 | 206 |
| LLPS-Fus-0570 | Fusarium solani | 28.04 | 2e-09 | 64.7 |
| LLPS-Mod-1297 | Monodelphis domestica | 27.88 | 2e-49 | 184 |
| LLPS-Scm-1120 | Scophthalmus maximus | 27.81 | 2e-52 | 194 |
| LLPS-Orn-2112 | Oreochromis niloticus | 27.62 | 3e-55 | 201 |
| LLPS-Drm-0332 | Drosophila melanogaster | 27.59 | 6e-53 | 195 |
| LLPS-Cae-1670 | Caenorhabditis elegans | 27.53 | 5e-34 | 140 |
| LLPS-Tar-0339 | Takifugu rubripes | 27.34 | 4e-48 | 181 |
| LLPS-Trr-0491 | Trichoderma reesei | 27.27 | 6e-08 | 59.7 |
| LLPS-Orl-2057 | Oryzias latipes | 27.23 | 3e-54 | 199 |
| LLPS-Ora-0270 | Ornithorhynchus anatinus | 26.77 | 1e-40 | 159 |
| LLPS-Fuv-0548 | Fusarium verticillioides | 26.27 | 6e-08 | 59.7 |
| LLPS-Beb-0312 | Beauveria bassiana | 26.17 | 5e-06 | 53.5 |
| LLPS-Abg-0677 | Absidia glauca | 26.06 | 4e-35 | 143 |
| LLPS-Fuo-1160 | Fusarium oxysporum | 24.88 | 5e-07 | 56.6 |
| LLPS-Asn-1342 | Aspergillus nidulans | 24.72 | 1e-13 | 78.2 |
| LLPS-Lem-0822 | Leptosphaeria maculans | 24.66 | 4e-08 | 59.3 |
| LLPS-Tum-0098 | Tuber melanosporum | 24.65 | 7e-11 | 68.9 |
| LLPS-Ast-0305 | Aspergillus terreus | 24.5 | 1e-14 | 80.9 |
| LLPS-Asni-0974 | Aspergillus niger | 24.08 | 2e-06 | 55.1 |
| LLPS-Nec-0791 | Neurospora crassa | 23.49 | 3e-14 | 79.7 |
| LLPS-Nef-0957 | Neosartorya fischeri | 23.38 | 2e-15 | 83.6 |
| LLPS-Asf-0385 | Aspergillus flavus | 23.2 | 4e-15 | 82.8 |
| LLPS-Aso-0789 | Aspergillus oryzae | 23.2 | 4e-15 | 82.8 |
| LLPS-Asc-0169 | Aspergillus clavatus | 22.92 | 2e-13 | 77.0 |
| LLPS-Dos-0747 | Dothistroma septosporum | 22.79 | 7e-06 | 53.1 |
| LLPS-Zyt-0689 | Zymoseptoria tritici | 22.72 | 3e-10 | 67.4 |
| LLPS-Asfu-0066 | Aspergillus fumigatus | 22.55 | 9e-16 | 84.7 |
| LLPS-Pyt-0788 | Pyrenophora teres | 21.52 | 1e-08 | 62.0 |
| LLPS-Pytr-0057 | Pyrenophora triticirepentis | 21.25 | 4e-08 | 60.5 |