LLPS-Nia-1420
TAF15B_0
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Transcription initiation factor tfiid subunit 15b |
| Gene Name: | TAF15B_0, A4A49_15074 |
| Ensembl Gene: | A4A49_15074 |
| Ensembl Protein: | OIT06850 |
| Organism: | Nicotiana attenuata |
| Taxa ID: | 49451 |
| LLPS Type: | Scaffold |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Droplet, Nucleolus, Centrosome/Spindle pole body, P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | OIT06850 | OIT06850 |
| UniProt | A0A1J6IQ75, A0A1J6IQ75_NICAT | |
| GeneBank | MJEQ01037184 | OIT06850.1 |
| RefSeq | XM_019378417.1 | XP_019233962.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAGNYGHDGG VSDPPPTDGG YGGSGGDGYG GSGTGGYGGS GGTGGYGGSG GTGGYDSSGG 60 61 GGYGGSGVGG HGGFEGSGYG GPGGGGYASG NRGGYGGSGN GGGYGGSGSR GGYGGTGGGR 120 121 YGAGGASYGG STGGYGNSDR GGGRGSGGYG GGGSRNQGGG GYQGGDRGGS GGRGGGRSGG 180 181 SGRDGDWRCP NPSCGNLNFA RRVECNKCGA PSPGGNDDRG SRGGSGYGRG GSGGGYGNNR 240 241 GGRGDNYDRG SGGSNRNDSY AGNQGRADGG YGQGPPAARP SYGGPDSSYP PPSNTYGGNS 300 301 DDAPDAVPPP ASYSGAPPSY PPSHASAVGY GRNIQSDARG DGRGGPQGGY DGGYGGGPRK 360 361 EVGSHGSAEA PAKVKQCDEH CGDSCDNSRI YISNLPPDVT IEELQELFGS IGQVARIKQK 420 421 RGYKDQWPWS IKIYTDEKGN NKGDAVLSYE DPSAAHSAGG FFNNYDFRGY KISVAMAEKS 480 481 APKDPSAYGS GGRGRGGYGG DRCRDNYGSG PDRNFHGGNR SRPY 524 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGGTA ATTACGGGCA CGACGGCGGC GTATCTGACC CGCCGCCTAC TGACGGAGGA 60 61 TACGGAGGCT CTGGCGGTGA TGGATACGGC GGCTCAGGCA CTGGTGGATA CGGTGGCTCG 120 121 GGAGGCACTG GTGGATACGG TGGTTCAGGA GGCACTGGTG GATATGATAG TTCCGGCGGC 180 181 GGAGGATATG GTGGCTCCGG TGTCGGTGGA CACGGTGGTT TTGAAGGCAG TGGATACGGT 240 241 GGTCCTGGAG GAGGTGGATA TGCATCGGGC AACAGAGGGG GATATGGTGG ATCAGGCAAC 300 301 GGAGGGGGAT ATGGTGGATC GGGCAGCAGA GGGGGATATG GTGGAACAGG TGGTGGAAGA 360 361 TATGGTGCGG GAGGGGCTAG TTACGGAGGC AGCACTGGAG GATATGGTAA CAGTGATAGA 420 421 GGCGGTGGAA GAGGAAGTGG AGGATATGGT GGTGGTGGTT CCCGTAATCA GGGTGGTGGT 480 481 GGATATCAAG GAGGAGATCG TGGTGGTAGC GGTGGAAGAG GTGGTGGTCG CAGTGGAGGA 540 541 AGTGGGAGGG ATGGTGATTG GCGTTGCCCT AATCCAAGTT GTGGGAACTT GAACTTTGCT 600 601 AGAAGAGTTG AGTGTAATAA ATGTGGTGCA CCTTCGCCTG GGGGTAATGA TGATCGTGGT 660 661 AGCAGAGGTG GTAGCGGTTA TGGTAGAGGT GGAAGTGGTG GGGGATATGG AAATAATCGA 720 721 GGGGGAAGGG GTGATAATTA TGATAGAGGG AGTGGAGGAA GCAATAGGAA TGACTCGTAT 780 781 GCTGGTAATC AGGGAAGAGC TGATGGTGGT TATGGTCAGG GTCCTCCAGC TGCTCGTCCA 840 841 TCTTATGGAG GCCCTGATAG CAGCTATCCA CCACCGTCCA ATACTTACGG TGGCAACTCA 900 901 GACGATGCCC CTGATGCAGT TCCTCCGCCA GCAAGTTACA GTGGTGCGCC TCCATCATAT 960 961 CCCCCTTCAC ATGCTAGTGC TGTTGGCTAT GGTCGGAATA TACAATCTGA TGCACGTGGT 1020 1021 GATGGTCGGG GTGGCCCACA AGGAGGATAT GATGGGGGAT ATGGTGGTGG TCCTCGAAAA 1080 1081 GAAGTAGGTA GTCATGGCAG TGCTGAGGCT CCAGCGAAGG TCAAGCAGTG TGATGAGCAT 1140 1141 TGTGGAGATT CTTGTGACAA CTCAAGAATA TACATCTCAA ATTTGCCCCC TGATGTCACC 1200 1201 ATTGAAGAAC TCCAAGAGCT TTTTGGAAGC ATTGGACAAG TGGCAAGAAT CAAGCAAAAA 1260 1261 CGAGGTTACA AAGACCAGTG GCCTTGGAGC ATAAAGATAT ATACAGATGA AAAAGGAAAT 1320 1321 AACAAAGGAG ATGCAGTATT GTCATATGAA GATCCTTCTG CAGCGCACTC AGCTGGAGGC 1380 1381 TTTTTTAATA ATTATGACTT CAGAGGTTAT AAGATCAGTG TTGCAATGGC TGAGAAGTCT 1440 1441 GCACCAAAGG ATCCTTCAGC ATATGGTTCT GGGGGCCGTG GTCGAGGCGG ATATGGTGGT 1500 1501 GACCGGTGCA GAGATAACTA TGGTTCTGGT CCAGACCGAA ATTTTCATGG TGGAAACCGT 1560 1561 TCACGTCCTT ACTGA 1575 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-2048 | Solanum tuberosum | 100.0 | 1e-10 | 67.4 |
| LLPS-Mua-1666 | Musa acuminata | 100.0 | 1e-06 | 54.3 |
| LLPS-Sol-2523 | Solanum lycopersicum | 100.0 | 2e-10 | 67.0 |
| LLPS-Coc-0909 | Corchorus capsularis | 96.43 | 9e-10 | 65.1 |
| LLPS-Viv-0811 | Vitis vinifera | 96.43 | 7e-10 | 65.5 |
| LLPS-Glm-2169 | Glycine max | 96.43 | 4e-10 | 65.9 |
| LLPS-Phv-1550 | Phaseolus vulgaris | 96.3 | 5e-09 | 62.4 |
| LLPS-Vir-0261 | Vigna radiata | 96.3 | 6e-09 | 62.4 |
| LLPS-Via-2144 | Vigna angularis | 96.3 | 5e-09 | 62.4 |
| LLPS-Thc-1230 | Theobroma cacao | 96.3 | 3e-09 | 63.5 |
| LLPS-Bro-0016 | Brassica oleracea | 92.86 | 7e-10 | 65.1 |
| LLPS-Cus-0318 | Cucumis sativus | 92.86 | 1e-09 | 64.3 |
| LLPS-Mae-2446 | Manihot esculenta | 92.59 | 7e-09 | 62.0 |
| LLPS-Arl-0809 | Arabidopsis lyrata | 92.59 | 2e-09 | 63.5 |
| LLPS-Prp-0782 | Prunus persica | 89.29 | 7e-09 | 62.0 |
| LLPS-Art-0355 | Arabidopsis thaliana | 88.89 | 2e-08 | 60.8 |
| LLPS-Gor-1130 | Gossypium raimondii | 88.89 | 5e-08 | 59.3 |
| LLPS-Brn-1050 | Brassica napus | 88.89 | 6e-09 | 62.4 |
| LLPS-Orbr-0515 | Oryza brachyantha | 85.71 | 1e-08 | 61.2 |
| LLPS-Dac-1964 | Daucus carota | 85.71 | 4e-08 | 59.7 |
| LLPS-Orm-1310 | Oryza meridionalis | 84.69 | 2e-50 | 186 |
| LLPS-Orn-1868 | Oreochromis niloticus | 82.14 | 1e-07 | 58.2 |
| LLPS-Scm-4036 | Scophthalmus maximus | 82.14 | 6e-08 | 58.9 |
| LLPS-Pof-3703 | Poecilia formosa | 82.14 | 5e-08 | 59.7 |
| LLPS-Met-0159 | Medicago truncatula | 82.14 | 8e-07 | 55.8 |
| LLPS-Tar-0217 | Takifugu rubripes | 82.14 | 3e-07 | 57.0 |
| LLPS-Xim-3708 | Xiphophorus maculatus | 82.14 | 5e-08 | 59.7 |
| LLPS-Scf-2459 | Scleropages formosus | 82.14 | 3e-08 | 60.1 |
| LLPS-Lep-2063 | Leersia perrieri | 82.14 | 6e-08 | 59.3 |
| LLPS-Orl-0844 | Oryzias latipes | 82.14 | 2e-07 | 57.0 |
| LLPS-Zem-0210 | Zea mays | 80.87 | 7e-57 | 202 |
| LLPS-Php-2100 | Physcomitrella patens | 80.58 | 1e-48 | 177 |
| LLPS-Sob-2008 | Sorghum bicolor | 78.57 | 9e-07 | 55.5 |
| LLPS-Lac-1565 | Latimeria chalumnae | 78.57 | 1e-07 | 58.2 |
| LLPS-Leo-0560 | Lepisosteus oculatus | 78.57 | 1e-08 | 61.6 |
| LLPS-Sem-1200 | Selaginella moellendorffii | 76.79 | 2e-54 | 192 |
| LLPS-Gaga-2774 | Gallus gallus | 75.0 | 2e-07 | 58.2 |
| LLPS-Tag-1643 | Taeniopygia guttata | 75.0 | 2e-07 | 57.4 |
| LLPS-Fia-3041 | Ficedula albicollis | 75.0 | 2e-07 | 57.4 |
| LLPS-Meg-2407 | Meleagris gallopavo | 75.0 | 2e-07 | 57.8 |
| LLPS-Dar-3786 | Danio rerio | 75.0 | 6e-07 | 56.2 |
| LLPS-Mea-1617 | Mesocricetus auratus | 75.0 | 1e-06 | 55.1 |
| LLPS-Orp-0131 | Oryza punctata | 72.61 | 8e-60 | 211 |
| LLPS-Orb-1829 | Oryza barthii | 72.61 | 6e-60 | 211 |
| LLPS-Orgl-1550 | Oryza glumaepatula | 71.97 | 7e-59 | 209 |
| LLPS-Anc-2346 | Anolis carolinensis | 71.43 | 4e-06 | 53.9 |
| LLPS-Caf-3220 | Canis familiaris | 71.43 | 5e-06 | 53.5 |
| LLPS-Pes-1904 | Pelodiscus sinensis | 71.43 | 1e-06 | 55.1 |
| LLPS-Anp-2499 | Anas platyrhynchos | 71.43 | 7e-07 | 55.8 |
| LLPS-Ova-2888 | Ovis aries | 71.43 | 4e-06 | 53.9 |
| LLPS-Ora-1303 | Ornithorhynchus anatinus | 71.43 | 3e-06 | 53.9 |
| LLPS-Sah-2286 | Sarcophilus harrisii | 71.43 | 3e-06 | 53.9 |
| LLPS-Org-2025 | Oryza glaberrima | 71.34 | 4e-63 | 211 |
| LLPS-Ors-2022 | Oryza sativa | 71.34 | 4e-63 | 211 |
| LLPS-Asm-0085 | Astyanax mexicanus | 67.86 | 7e-06 | 52.8 |
| LLPS-Hov-0015 | Hordeum vulgare | 67.48 | 1e-57 | 205 |
| LLPS-Brd-1292 | Brachypodium distachyon | 66.88 | 1e-56 | 202 |
| LLPS-Pot-2150 | Populus trichocarpa | 57.18 | 3e-76 | 254 |
| LLPS-Orr-1411 | Oryza rufipogon | 43.01 | 2e-10 | 67.0 |
| LLPS-Sei-1264 | Setaria italica | 43.01 | 2e-10 | 67.0 |
| LLPS-Orni-1289 | Oryza nivara | 43.01 | 2e-10 | 66.6 |
| LLPS-Ori-2100 | Oryza indica | 43.01 | 2e-10 | 66.6 |
| LLPS-Abg-1156 | Absidia glauca | 42.55 | 6e-10 | 64.7 |
| LLPS-Osl-0087 | Ostreococcus lucimarinus | 42.0 | 3e-19 | 90.9 |
| LLPS-Brr-2803 | Brassica rapa | 40.86 | 2e-09 | 63.2 |
| LLPS-Tra-0674 | Triticum aestivum | 40.38 | 8e-10 | 65.1 |
| LLPS-Urm-0139 | Ursus maritimus | 39.81 | 2e-12 | 73.9 |
| LLPS-Aim-3827 | Ailuropoda melanoleuca | 39.81 | 5e-12 | 72.8 |
| LLPS-Cap-4025 | Cavia porcellus | 38.83 | 2e-11 | 70.5 |
| LLPS-Fud-1072 | Fukomys damarensis | 38.83 | 3e-11 | 70.1 |
| LLPS-Dio-1039 | Dipodomys ordii | 38.78 | 5e-11 | 68.2 |
| LLPS-Chs-2848 | Chlorocebus sabaeus | 38.61 | 3e-11 | 68.9 |
| LLPS-Cas-0933 | Carlito syrichta | 37.86 | 6e-11 | 69.3 |
| LLPS-Nol-3433 | Nomascus leucogenys | 37.86 | 6e-11 | 68.9 |
| LLPS-Eqc-1131 | Equus caballus | 37.86 | 5e-11 | 69.3 |
| LLPS-Poa-2607 | Pongo abelii | 37.86 | 8e-11 | 68.9 |
| LLPS-Mam-2464 | Macaca mulatta | 37.86 | 6e-11 | 69.3 |
| LLPS-Otg-2864 | Otolemur garnettii | 37.86 | 6e-11 | 69.3 |
| LLPS-Fec-1353 | Felis catus | 37.86 | 6e-11 | 69.3 |
| LLPS-Pap-2087 | Pan paniscus | 37.86 | 8e-11 | 68.9 |
| LLPS-Pat-1353 | Pan troglodytes | 37.86 | 8e-11 | 68.9 |
| LLPS-Hos-0808 | Homo sapiens | 37.86 | 8e-11 | 68.9 |
| LLPS-Loa-0495 | Loxodonta africana | 37.86 | 7e-11 | 68.9 |
| LLPS-Man-2674 | Macaca nemestrina | 37.86 | 6e-11 | 69.3 |
| LLPS-Myl-1316 | Myotis lucifugus | 37.86 | 5e-11 | 69.3 |
| LLPS-Mup-1311 | Mustela putorius furo | 37.86 | 5e-11 | 69.3 |
| LLPS-Mal-3101 | Mandrillus leucophaeus | 37.86 | 6e-11 | 69.3 |
| LLPS-Paa-2937 | Papio anubis | 37.86 | 6e-11 | 69.3 |
| LLPS-Bot-0548 | Bos taurus | 37.86 | 7e-11 | 68.9 |
| LLPS-Gog-1454 | Gorilla gorilla | 37.86 | 8e-11 | 68.9 |
| LLPS-Caj-3101 | Callithrix jacchus | 37.86 | 6e-11 | 69.3 |
| LLPS-Mum-2279 | Mus musculus | 37.86 | 7e-11 | 68.9 |
| LLPS-Maf-1508 | Macaca fascicularis | 37.86 | 6e-11 | 69.3 |
| LLPS-Aon-3978 | Aotus nancymaae | 37.86 | 6e-11 | 69.3 |
| LLPS-Cea-0156 | Cercocebus atys | 37.86 | 6e-11 | 69.3 |
| LLPS-Sus-3401 | Sus scrofa | 37.86 | 7e-11 | 68.9 |
| LLPS-Coo-0526 | Colletotrichum orbiculare | 37.8 | 7e-08 | 58.9 |
| LLPS-Gaa-1242 | Gasterosteus aculeatus | 37.76 | 4e-10 | 66.6 |
| LLPS-Ran-0538 | Rattus norvegicus | 37.62 | 1e-10 | 67.8 |
| LLPS-Ict-2955 | Ictidomys tridecemlineatus | 36.89 | 1e-10 | 68.2 |
| LLPS-Orc-1376 | Oryctolagus cuniculus | 36.89 | 8e-11 | 68.9 |
| LLPS-Mod-2572 | Monodelphis domestica | 36.89 | 6e-10 | 65.9 |
| LLPS-Icp-1108 | Ictalurus punctatus | 36.79 | 3e-09 | 63.9 |
| LLPS-Tum-0395 | Tuber melanosporum | 36.59 | 9e-07 | 55.5 |
| LLPS-Fuv-0053 | Fusarium verticillioides | 36.59 | 2e-07 | 57.4 |
| LLPS-Xet-1720 | Xenopus tropicalis | 36.26 | 8e-10 | 65.5 |
| LLPS-Cogr-0437 | Colletotrichum graminicola | 35.37 | 1e-07 | 58.2 |
| LLPS-Fuo-0404 | Fusarium oxysporum | 35.37 | 8e-07 | 55.5 |
| LLPS-Fus-1456 | Fusarium solani | 35.37 | 5e-07 | 55.8 |
| LLPS-Drm-1254 | Drosophila melanogaster | 35.16 | 3e-07 | 56.6 |
| LLPS-Rhb-1468 | Rhinopithecus bieti | 35.0 | 4e-08 | 60.1 |
| LLPS-Ten-0292 | Tetraodon nigroviridis | 34.95 | 3e-09 | 63.5 |
| LLPS-Chr-1691 | Chlamydomonas reinhardtii | 34.95 | 3e-08 | 60.5 |
| LLPS-Gag-0879 | Gaeumannomyces graminis | 34.88 | 7e-07 | 55.8 |
| LLPS-Tut-1626 | Tursiops truncatus | 32.97 | 5e-08 | 59.7 |
| LLPS-Scc-0563 | Schizosaccharomyces cryophilus | 32.85 | 1e-06 | 55.1 |