LLPS-Mum-4362
Col1a1

▼ OVERVIEW


Status: Unreviewed
Protein Name: Collagen alpha-1(I) chain; Alpha-1 type I collagen
Gene Name: Col1a1, Cola1
Ensembl Gene: ENSMUSG00000001506.10
Ensembl Protein: ENSMUSP00000001547.7
Organism: Mus musculus
Taxa ID: 10090
LLPS Type: Regulator


▼ PROPERTY



▼ Classification


Condensates:
CondensateEvidenceOrthologs
Stress granulePredicted from orthologs(View)

▼ FUNCTION


Type I collagen is a member of group I collagen (fibrillar forming collagen).

▼ SEQUENCE


Protein Sequence (FASTA)
1     MFSFVDLRLL  LLLGATALLT  HGQEDIPEVS  CIHNGLRVPN  GETWKPEVCL  ICICHNGTAV  60
61    CDDVQCNEEL  DCPNPQRREG  ECCAFCPEEY  VSPNSEDVGV  EGPKGDPGPQ  GPRGPVGPPG  120
121   RDGIPGQPGL  PGPPGPPGPP  GPPGLGGNFA  SQMSYGYDEK  SAGVSVPGPM  GPSGPRGLPG  180
181   PPGAPGPQGF  QGPPGEPGEP  GGSGPMGPRG  PPGPPGKNGD  DGEAGKPGRP  GERGPPGPQG  240
241   ARGLPGTAGL  PGMKGHRGFS  GLDGAKGDAG  PAGPKGEPGS  PGENGAPGQM  GPRGLPGERG  300
301   RPGPPGTAGA  RGNDGAVGAA  GPPGPTGPTG  PPGFPGAVGA  KGEAGPQGAR  GSEGPQGVRG  360
361   EPGPPGPAGA  AGPAGNPGAD  GQPGAKGANG  APGIAGAPGF  PGARGPSGPQ  GPSGPPGPKG  420
421   NSGEPGAPGN  KGDTGAKGEP  GATGVQGPPG  PAGEEGKRGA  RGEPGPSGLP  GPPGERGGPG  480
481   SRGFPGADGV  AGPKGPSGER  GAPGPAGPKG  SPGEAGRPGE  AGLPGAKGLT  GSPGSPGPDG  540
541   KTGPPGPAGQ  DGRPGPAGPP  GARGQAGVMG  FPGPKGTAGE  PGKAGERGLP  GPPGAVGPAG  600
601   KDGEAGAQGA  PGPAGPAGER  GEQGPAGSPG  FQGLPGPAGP  PGEAGKPGEQ  GVPGDLGAPG  660
661   PSGARGERGF  PGERGVQGPP  GPAGPRGNNG  APGNDGAKGD  TGAPGAPGSQ  GAPGLQGMPG  720
721   ERGAAGLPGP  KGDRGDAGPK  GADGSPGKDG  ARGLTGPIGP  PGPAGAPGDK  GEAGPSGPPG  780
781   PTGARGAPGD  RGEAGPPGPA  GFAGPPGADG  QPGAKGEPGD  TGVKGDAGPP  GPAGPAGPPG  840
841   PIGNVGAPGP  KGPRGAAGPP  GATGFPGAAG  RVGPPGPSGN  AGPPGPPGPV  GKEGGKGPRG  900
901   ETGPAGRPGE  VGPPGPPGPA  GEKGSPGADG  PAGSPGTPGP  QGIAGQRGVV  GLPGQRGERG  960
961   FPGLPGPSGE  PGKQGPSGSS  GERGPPGPMG  PPGLAGPPGE  SGREGSPGAE  GSPGRDGAPG  1020
1021  AKGDRGETGP  AGPPGAPGAP  GAPGPVGPAG  KNGDRGETGP  AGPAGPIGPA  GARGPAGPQG  1080
1081  PRGDKGETGE  QGDRGIKGHR  GFSGLQGPPG  SPGSPGEQGP  SGASGPAGPR  GPPGSAGSPG  1140
1141  KDGLNGLPGP  IGPPGPRGRT  GDSGPAGPPG  PPGPPGPPGP  PSGGYDFSFL  PQPPQEKSQD  1200
1201  GGRYYRADDA  NVVRDRDLEV  DTTLKSLSQQ  IENIRSPEGS  RKNPARTCRD  LKMCHSDWKS  1260
1261  GEYWIDPNQG  CNLDAIKVYC  NMETGQTCVF  PTQPSVPQKN  WYISPNPKEK  KHVWFGESMT  1320
1321  DGFPFEYGSE  GSDPADVAIQ  LTFLRLMSTE  ASQNITYHCK  NSVAYMDQQT  GNLKKALLLQ  1380
1381  GSNEIELRGE  GNSRFTYSTL  VDGCTSHTGT  WGKTVIEYKT  TKTSRLPIID  VAPLDIGAPD  1440
1441  QEFGLDIGPA  CFV  1453
Nucleotide CDS Sequence (FASTA)
1     ATGTTCAGCT  TTGTGGACCT  CCGGCTCCTG  CTCCTCTTAG  GGGCCACTGC  CCTCCTGACG  60
61    CATGGCCAAG  AAGACATCCC  TGAAGTCAGC  TGCATACACA  ATGGCCTAAG  GGTCCCCAAT  120
121   GGTGAGACGT  GGAAACCCGA  GGTATGCTTG  ATCTGTATCT  GCCACAATGG  CACGGCTGTG  180
181   TGCGATGACG  TGCAATGCAA  TGAAGAACTG  GACTGTCCCA  ACCCCCAAAG  ACGGGAGGGC  240
241   GAGTGCTGTG  CTTTCTGCCC  GGAAGAATAC  GTATCACCAA  ACTCAGAAGA  TGTAGGAGTC  300
301   GAGGGACCCA  AGGGAGACCC  TGGCCCCCAA  GGCCCAAGGG  GACCCGTTGG  CCCCCCTGGA  360
361   CGAGATGGCA  TCCCTGGACA  GCCTGGACTT  CCTGGTCCTC  CTGGTCCCCC  TGGGCCCCCC  420
421   GGACCCCCTG  GCCTTGGAGG  AAACTTTGCT  TCCCAGATGT  CCTATGGCTA  TGATGAAAAA  480
481   TCAGCTGGAG  TTTCCGTGCC  TGGCCCCATG  GGTCCTTCTG  GTCCTCGTGG  TCTCCCTGGC  540
541   CCCCCTGGTG  CACCTGGTCC  ACAAGGTTTC  CAAGGCCCCC  CTGGTGAACC  TGGCGAGCCT  600
601   GGCGGTTCAG  GTCCAATGGG  TCCCCGAGGT  CCCCCTGGCC  CTCCTGGCAA  GAATGGAGAT  660
661   GATGGGGAAG  CTGGCAAGCC  CGGCCGTCCT  GGTGAGCGTG  GACCTCCTGG  ACCTCAGGGT  720
721   GCTCGTGGAT  TGCCTGGAAC  AGCTGGCCTC  CCTGGAATGA  AGGGACACCG  AGGCTTCAGT  780
781   GGTTTGGATG  GTGCCAAAGG  AGATGCTGGT  CCTGCTGGTC  CTAAGGGAGA  GCCCGGCAGT  840
841   CCTGGTGAAA  ACGGAGCTCC  TGGCCAGATG  GGTCCCCGAG  GTCTGCCCGG  TGAGAGAGGT  900
901   CGCCCTGGAC  CTCCTGGCAC  TGCTGGTGCT  CGCGGTAACG  ATGGTGCTGT  TGGTGCTGCT  960
961   GGACCCCCTG  GTCCCACCGG  CCCCACTGGC  CCTCCTGGCT  TCCCTGGTGC  AGTTGGTGCT  1020
1021  AAGGGTGAAG  CTGGTCCCCA  AGGAGCTAGA  GGCTCTGAAG  GTCCCCAGGG  TGTGCGTGGT  1080
1081  GAGCCCGGAC  CCCCTGGCCC  TGCTGGTGCT  GCCGGCCCTG  CTGGAAACCC  TGGTGCTGAT  1140
1141  GGACAACCTG  GCGCTAAAGG  TGCCAATGGT  GCTCCTGGTA  TTGCTGGTGC  TCCTGGCTTC  1200
1201  CCTGGTGCCC  GAGGCCCCTC  TGGACCCCAG  GGCCCCAGCG  GCCCTCCAGG  TCCCAAGGGT  1260
1261  AACAGTGGTG  AACCTGGTGC  TCCTGGCAAC  AAAGGAGACA  CTGGTGCCAA  AGGAGAACCC  1320
1321  GGTGCTACTG  GAGTTCAAGG  TCCCCCAGGC  CCTGCCGGAG  AAGAAGGAAA  ACGAGGAGCC  1380
1381  CGTGGTGAGC  CTGGACCTTC  CGGACTGCCT  GGACCTCCTG  GCGAGCGTGG  TGGACCTGGT  1440
1441  AGCCGTGGTT  TCCCTGGTGC  TGATGGTGTT  GCTGGCCCCA  AGGGTCCTTC  CGGTGAACGT  1500
1501  GGTGCTCCCG  GACCTGCTGG  TCCCAAAGGT  TCTCCTGGTG  AAGCTGGTCG  CCCCGGTGAA  1560
1561  GCTGGTCTCC  CTGGTGCCAA  GGGTCTCACT  GGCAGTCCTG  GCAGCCCTGG  TCCTGATGGC  1620
1621  AAAACCGGCC  CCCCTGGTCC  CGCTGGTCAA  GATGGTCGCC  CTGGACCCGC  AGGTCCTCCT  1680
1681  GGAGCCCGTG  GCCAGGCTGG  TGTGATGGGA  TTCCCTGGAC  CTAAGGGTAC  CGCTGGAGAA  1740
1741  CCTGGAAAGG  CTGGAGAGCG  AGGCCTTCCC  GGACCCCCTG  GCGCTGTTGG  TCCTGCTGGC  1800
1801  AAAGATGGAG  AAGCTGGAGC  TCAGGGAGCC  CCTGGCCCTG  CTGGTCCTGC  TGGTGAGAGA  1860
1861  GGTGAACAAG  GTCCCGCTGG  CTCCCCTGGA  TTCCAGGGTC  TTCCTGGTCC  TGCCGGTCCT  1920
1921  CCTGGTGAAG  CAGGCAAGCC  TGGTGAACAG  GGTGTTCCTG  GAGACCTTGG  TGCCCCTGGA  1980
1981  CCCTCTGGCG  CAAGAGGCGA  GAGAGGTTTC  CCTGGTGAAC  GTGGTGTACA  AGGTCCCCCA  2040
2041  GGTCCTGCTG  GTCCCCGAGG  AAACAATGGT  GCCCCCGGCA  ACGATGGTGC  CAAGGGTGAT  2100
2101  ACTGGTGCCC  CCGGAGCTCC  CGGTAGCCAG  GGTGCCCCCG  GTCTTCAGGG  AATGCCTGGT  2160
2161  GAACGTGGTG  CAGCTGGTCT  TCCAGGTCCT  AAGGGTGACA  GAGGTGATGC  TGGTCCCAAA  2220
2221  GGTGCTGATG  GTTCTCCTGG  TAAAGATGGT  GCCCGTGGTC  TGACTGGTCC  CATTGGTCCT  2280
2281  CCTGGCCCTG  CTGGTGCCCC  TGGTGACAAG  GGTGAAGCTG  GTCCCAGTGG  TCCTCCCGGT  2340
2341  CCCACCGGAG  CCCGTGGTGC  TCCCGGAGAC  CGTGGTGAGG  CTGGTCCCCC  TGGTCCTGCT  2400
2401  GGCTTTGCCG  GCCCCCCTGG  TGCTGATGGC  CAACCTGGTG  CGAAAGGTGA  ACCTGGTGAT  2460
2461  ACTGGTGTTA  AAGGTGATGC  TGGTCCTCCT  GGCCCTGCTG  GTCCTGCTGG  ACCCCCCGGC  2520
2521  CCCATTGGTA  ACGTTGGTGC  TCCTGGACCC  AAAGGTCCTC  GTGGTGCTGC  TGGTCCCCCT  2580
2581  GGTGCTACTG  GCTTCCCTGG  TGCTGCTGGC  CGTGTCGGTC  CCCCTGGTCC  CTCTGGAAAT  2640
2641  GCTGGACCCC  CTGGCCCTCC  CGGTCCCGTT  GGCAAAGAAG  GGGGCAAAGG  TCCCCGTGGT  2700
2701  GAGACTGGCC  CTGCTGGACG  TCCTGGTGAA  GTTGGTCCCC  CAGGTCCCCC  CGGTCCTGCT  2760
2761  GGTGAGAAAG  GATCTCCTGG  TGCTGATGGA  CCTGCTGGCT  CTCCTGGTAC  CCCTGGACCT  2820
2821  CAGGGTATTG  CTGGACAACG  TGGTGTGGTC  GGTCTTCCCG  GTCAGAGAGG  AGAAAGAGGC  2880
2881  TTCCCTGGTC  TTCCTGGCCC  CTCTGGTGAA  CCTGGCAAAC  AAGGTCCTTC  TGGATCAAGT  2940
2941  GGTGAACGCG  GTCCCCCTGG  CCCCATGGGG  CCCCCTGGAT  TGGCTGGTCC  CCCTGGTGAA  3000
3001  TCTGGACGTG  AGGGATCCCC  TGGTGCTGAA  GGCTCCCCTG  GAAGGGATGG  TGCTCCCGGG  3060
3061  GCCAAGGGTG  ACCGTGGTGA  GACTGGCCCC  GCTGGCCCCC  CTGGTGCCCC  TGGTGCTCCC  3120
3121  GGTGCTCCCG  GCCCTGTTGG  TCCCGCTGGC  AAGAATGGCG  ATCGTGGTGA  GACTGGTCCT  3180
3181  GCTGGTCCTG  CTGGTCCCAT  TGGCCCTGCT  GGTGCCCGTG  GCCCTGCTGG  ACCCCAAGGC  3240
3241  CCCCGTGGTG  ACAAGGGTGA  GACAGGCGAA  CAAGGTGACA  GAGGCATAAA  GGGTCATCGT  3300
3301  GGCTTCTCTG  GTCTCCAGGG  TCCTCCTGGT  TCTCCTGGTT  CTCCTGGTGA  ACAAGGCCCC  3360
3361  TCTGGAGCTT  CAGGTCCTGC  AGGCCCCCGG  GGTCCCCCTG  GCTCTGCTGG  TTCTCCTGGC  3420
3421  AAAGACGGAC  TCAACGGTCT  CCCTGGCCCC  ATTGGTCCCC  CTGGTCCTCG  AGGTCGCACT  3480
3481  GGTGACAGCG  GCCCTGCTGG  TCCCCCCGGC  CCTCCTGGAC  CCCCTGGCCC  TCCTGGACCT  3540
3541  CCCAGTGGCG  GTTATGACTT  CAGCTTCCTG  CCTCAGCCAC  CTCAAGAGAA  GTCTCAAGAT  3600
3601  GGTGGCCGCT  ACTACCGGGC  CGATGATGCT  AACGTGGTTC  GTGACCGTGA  CCTTGAGGTG  3660
3661  GACACCACCC  TCAAGAGCCT  GAGTCAGCAG  ATTGAGAACA  TCCGCAGCCC  CGAAGGCAGC  3720
3721  CGCAAGAACC  CTGCCCGCAC  ATGCCGCGAC  CTCAAGATGT  GCCACTCTGA  CTGGAAGAGC  3780
3781  GGAGAGTACT  GGATCGACCC  TAACCAAGGC  TGCAACCTGG  ACGCCATCAA  GGTCTACTGC  3840
3841  AACATGGAGA  CAGGTCAGAC  CTGTGTGTTC  CCTACTCAGC  CGTCTGTGCC  TCAGAAGAAC  3900
3901  TGGTACATCA  GCCCGAACCC  CAAGGAAAAG  AAGCACGTCT  GGTTTGGAGA  GAGCATGACC  3960
3961  GATGGATTCC  CGTTCGAGTA  CGGAAGCGAG  GGCTCCGACC  CCGCCGATGT  CGCTATCCAG  4020
4021  CTGACCTTCC  TGCGCCTAAT  GTCCACCGAG  GCCTCCCAGA  ACATCACCTA  TCACTGCAAG  4080
4081  AACAGCGTAG  CCTACATGGA  CCAGCAGACT  GGCAACCTCA  AGAAGGCCCT  GCTCCTCCAG  4140
4141  GGATCCAACG  AGATCGAGCT  CAGAGGCGAA  GGCAACAGTC  GCTTCACCTA  CAGCACCCTT  4200
4201  GTGGACGGCT  GCACGAGTCA  CACCGGAACT  TGGGGCAAGA  CAGTCATCGA  ATACAAAACC  4260
4261  ACCAAGACCT  CCCGCCTGCC  CATCATCGAT  GTGGCTCCCT  TGGACATTGG  TGCCCCAGAC  4320
4321  CAGGAATTCG  GACTAGACAT  TGGCCCTGCC  TGCTTCGTGT  AA  4362

▼ KEYWORD


ID
Family
Alternative splicing
Calcium
Collagen
Complete proteome
Disulfide bond
Extracellular matrix
Glycoprotein
Hydroxylation
Metal-binding
Phosphoprotein
Reference proteome
Repeat
Secreted
Signal

▼ GENE ONTOLOGY


ID
Classification
Description
Cellular Component
Collagen trimer
Cellular Component
Collagen type I trimer
Cellular Component
Collagen-containing extracellular matrix
Cellular Component
Cytoplasm
Cellular Component
Endoplasmic reticulum
Cellular Component
Extracellular matrix
Cellular Component
Extracellular region
Cellular Component
Extracellular space
Cellular Component
Golgi apparatus
Cellular Component
Secretory granule
Molecular Function
Extracellular matrix structural constituent
Molecular Function
Extracellular matrix structural constituent conferring tensile strength
Molecular Function
Identical protein binding
Molecular Function
Metal ion binding
Molecular Function
Platelet-derived growth factor binding
Molecular Function
Protease binding
Biological Process
Blood vessel development
Biological Process
Bone trabecula formation
Biological Process
Cartilage development involved in endochondral bone morphogenesis
Biological Process
Cellular response to amino acid stimulus
Biological Process
Cellular response to epidermal growth factor stimulus
Biological Process
Cellular response to fibroblast growth factor stimulus
Biological Process
Cellular response to fluoride
Biological Process
Cellular response to mechanical stimulus
Biological Process
Cellular response to retinoic acid
Biological Process
Cellular response to transforming growth factor beta stimulus
Biological Process
Cellular response to tumor necrosis factor
Biological Process
Cellular response to vitamin E
Biological Process
Collagen biosynthetic process
Biological Process
Collagen fibril organization
Biological Process
Collagen-activated tyrosine kinase receptor signaling pathway
Biological Process
Embryonic skeletal system development
Biological Process
Endochondral ossification
Biological Process
Extracellular matrix organization
Biological Process
Face morphogenesis
Biological Process
Intramembranous ossification
Biological Process
Negative regulation of cell-substrate adhesion
Biological Process
Ossification
Biological Process
Osteoblast differentiation
Biological Process
Positive regulation of canonical Wnt signaling pathway
Biological Process
Positive regulation of cell migration
Biological Process
Positive regulation of epithelial to mesenchymal transition
Biological Process
Positive regulation of transcription, DNA-templated
Biological Process
Protein heterotrimerization
Biological Process
Protein localization to nucleus
Biological Process
Protein transport
Biological Process
Response to cAMP
Biological Process
Response to corticosteroid
Biological Process
Response to estradiol
Biological Process
Response to hydrogen peroxide
Biological Process
Response to hyperoxia
Biological Process
Response to mechanical stimulus
Biological Process
Response to peptide hormone
Biological Process
Sensory perception of sound
Biological Process
Skeletal system development
Biological Process
Skeletal system morphogenesis
Biological Process
Skin development
Biological Process
Skin morphogenesis
Biological Process
Tooth eruption
Biological Process
Tooth mineralization
Biological Process
Visual perception
Biological Process
Wound healing

▼ KEGG



▼ ORTHOLOGY


DrLLPS IDOrganismIdentityE-valueScore
LLPS-Ran-1714Rattus norvegicus99.371e-19 100
LLPS-Mea-1629Mesocricetus auratus98.732e-1896.3
LLPS-Myl-1325Myotis lucifugus98.15e-1895.1
LLPS-Caf-1540Canis familiaris97.471e-1897.1
LLPS-Cap-3686Cavia porcellus97.471e-1897.4
LLPS-Ova-2769Ovis aries97.476e-1998.2
LLPS-Aon-0094Aotus nancymaae97.034e-20 102
LLPS-Paa-4779Papio anubis97.033e-20 102
LLPS-Fec-3071Felis catus96.847e-1894.7
LLPS-Aim-4146Ailuropoda melanoleuca96.845e-1895.1
LLPS-Bot-0652Bos taurus96.841e-1896.7
LLPS-Mup-0210Mustela putorius furo96.632e-32 142
LLPS-Man-0647Macaca nemestrina96.321e-31 139
LLPS-Pat-1091Pan troglodytes96.22e-1896.7
LLPS-Pap-1436Pan paniscus96.22e-1896.7
LLPS-Hos-1373Homo sapiens96.22e-1896.7
LLPS-Cas-1330Carlito syrichta96.23e-1895.9
LLPS-Poa-3469Pongo abelii96.22e-1896.7
LLPS-Gog-4278Gorilla gorilla96.22e-1896.7
LLPS-Fud-3772Fukomys damarensis96.23e-1895.9
LLPS-Rhb-2149Rhinopithecus bieti96.012e-31 139
LLPS-Eqc-1233Equus caballus96.018e-33 143
LLPS-Caj-1606Callithrix jacchus96.019e-32 140
LLPS-Maf-0493Macaca fascicularis96.011e-31 139
LLPS-Chs-1595Chlorocebus sabaeus96.012e-31 139
LLPS-Cea-4564Cercocebus atys96.011e-31 139
LLPS-Sus-4814Sus scrofa96.016e-32 140
LLPS-Mal-0925Mandrillus leucophaeus96.011e-31 139
LLPS-Otg-1000Otolemur garnettii95.711e-30 136
LLPS-Gaga-2256Gallus gallus94.943e-1792.8
LLPS-Sah-3229Sarcophilus harrisii94.949e-1894.4
LLPS-Mod-4036Monodelphis domestica94.31e-1793.6
LLPS-Loa-2078Loxodonta africana93.675e-1791.7
LLPS-Anc-1131Anolis carolinensis93.672e-1792.8
LLPS-Pes-0689Pelodiscus sinensis91.145e-1791.7
LLPS-Lac-3968Latimeria chalumnae89.195e-1068.9
LLPS-Xet-3720Xenopus tropicalis86.712e-1173.6
LLPS-Scf-2828Scleropages formosus86.081e-1484.0
LLPS-Orn-3572Oreochromis niloticus84.813e-1482.4
LLPS-Asm-1089Astyanax mexicanus84.812e-1173.9
LLPS-Scm-3591Scophthalmus maximus84.181e-1484.0
LLPS-Orl-0058Oryzias latipes84.182e-1483.6
LLPS-Icp-3925Ictalurus punctatus83.543e-1379.3
LLPS-Dar-3379Danio rerio83.123e-1275.9
LLPS-Ten-3290Tetraodon nigroviridis80.36e-133 453
LLPS-Gaa-2774Gasterosteus aculeatus80.32e-133 455
LLPS-Tar-3405Takifugu rubripes78.483e-1276.3
LLPS-Xim-1734Xiphophorus maculatus78.441e-129 442
LLPS-Pof-1701Poecilia formosa75.321e-0967.4
LLPS-Urm-2475Ursus maritimus42.862e-0760.1
LLPS-Tut-2163Tursiops truncatus41.072e-0760.1
LLPS-Orc-3775Oryctolagus cuniculus40.359e-0861.2