LLPS-Aim-4146
COL1A1
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | COL1A1 |
Ensembl Gene: | ENSAMEG00000011903.1 |
Ensembl Protein: | ENSAMEP00000012684.1 |
Organism: | Ailuropoda melanoleuca |
Taxa ID: | 9646 |
LLPS Type: | Regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSAMET00000013220.1 | ENSAMEP00000012684.1 |
Ensembl | ENSAMET00000013208.1 | ENSAMEP00000012672.1 |
UniProt | G1M024, G1M024_AILME | |
GeneBank | ACTA01074983, ACTA01098983, ACTA01090983, ACTA01082983 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MFSFVDLRLL LLVAATALLT HGQEEGQEED SKSQIPPVTC VQNGLRYYDR DVWKPEACRI 60 61 CVCDNGNVLC DDVICDETKN CPGAQVPPGE CCPVCPDGEG TALGAWGWGG AGPKGDTGPR 120 121 GPRGPAGPPG RDGIPGQPGL PGPPGPPGPP GPPGLGGNFA PQMSYGYDEK STGGISVPGP 180 181 MGPSGPRGLP GPPGAPGPQG FQGPPGEPGE PGASGPMGPR GPPGPPGKNG DDGEAGKPGR 240 241 PGERGPPGPQ GARGLPGTAG LPGMKGHRGF SGLDGAKGDA GPAGPKGEPG SPGENGAPGQ 300 301 MGPRGLPGER GRPGAPGPAV STPGPLGDTF PFHSQGPTGP AGPPGFPGAV GAKGEAGPQG 360 361 ARGSEGPQGV RGEPGPPGPA GAAGPAGNPG ADGQPGAKGA NGAPGIAGAP GFPGARGPSG 420 421 PQGPSGPPGP KGNSGDGSPH CRPSPGLCPL QGPTGIQGPP GPAGEEGKRG ARGEPGPTGL 480 481 PGPPGERGGP GSRGFPGADG VAGPKGPAGE RGSPGPAGPK GSPGEAGRPG EAGLPGAKGL 540 541 TGSPGSPGPD GKTGPPGPAG QDGRPGPPGP PGARGQAGVM GFPGPKGAAG EPGKAGERGV 600 601 PGPPGAVGPA GKDGEAGAQG PPGPAGPAGE RGEQGPAGSP GFQGLPGPAG PPGEAGKPGE 660 661 QGVPGDLGAP GPSGARGERG FPGERGVQGP PGPAGPRGAN GAPGNDGAKG DAGAPGAPGS 720 721 QGAPGLQGMP GERGAAGLPG PKGDRGDAGP KGADGSPGKD GVRGLTGPIG PPGPAGAPGD 780 781 KGEAGPSGPA GPTGARGAPG DRGEPGPPGP AGFAGPPGAD GQPGAKGEPG DAGAKGDAGP 840 841 PGPAGPTGPP GPIGNVGAPG PKGARGSAGP PGATGFPGAA GRVGPPGPSG NAGPPGPPGP 900 901 AGKEGGKGPR GETGPAGRPG EVGPPGPPGP AGEKGSPGAD GPAGAPGTPG PQGIAGQRGV 960 961 VGLPGQRGER GFPGLPGPSG EPGKQGPSGA SGERGPPGPM GPPGLAGPPG ESGREGSPGA 1020 1021 EGSPGRDGSP GPKGDRGETG PAGPPGAPGA PGAPGPVGPA GKSGDRGETG PAGPAGPIGP 1080 1081 VGARGPAGPQ GPRGDKGETG EQGDRGIKGH RGFSGLQGPP GPPGSPGEQG PSGASGPAGP 1140 1141 RGPPGSAGSP GKDGLNGLPG PIGPPGPRGR TGDAGPVGPP GPPGPPGPPG PPSGGFDFSF 1200 1201 LPQPPQEKAH DGGRYYRADD ANVVRDRDLE VDTTLKSLSQ QIENIRSPEG SRKNPARTCR 1260 1261 DLKMCHSDWK SGEYWIDPNQ GCNLDAIKVF CNMETGETCV YPTQPHVAQK NWYISKNPKE 1320 1321 KRHVWYGESM TDGFQFEYGG QGSDPADVAI QLTFLRLMST EASQNITYHC KNSVAYMDQQ 1380 1381 TGNLKKALLL QGSNEIEIRA EGNSRFTYSV TYDGCTSHTG AWGKTVIEYK TTKTSRLPII 1440 1441 DVAPLDVGAP DQEFGMDVGP VCFL 1464 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTTCAGCT TTGTGGACCT CCGGCTCCTG CTCCTCGTAG CGGCCACCGC CCTCCTGACG 60 61 CACGGCCAAG AGGAGGGCCA AGAAGAAGAC AGTAAGTCGC AAATCCCACC AGTCACCTGC 120 121 GTACAGAACG GCCTCAGGTA CTATGACCGA GACGTATGGA AACCCGAGGC CTGCCGGATC 180 181 TGTGTCTGCG ACAACGGCAA CGTGTTGTGC GATGACGTGA TCTGCGACGA AACCAAGAAC 240 241 TGTCCCGGCG CCCAAGTCCC CCCGGGCGAA TGCTGCCCCG TCTGCCCCGA CGGCGAGGGT 300 301 ACAGCTCTGG GGGCCTGGGG CTGGGGGGGG GCGGGACCCA AGGGAGACAC TGGCCCCCGA 360 361 GGTCCAAGGG GACCTGCCGG CCCCCCTGGC CGAGATGGCA TCCCCGGCCA GCCTGGACTT 420 421 CCCGGCCCCC CCGGACCTCC CGGCCCCCCC GGACCTCCTG GCCTCGGAGG AAACTTTGCT 480 481 CCCCAAATGT CTTACGGCTA TGATGAGAAA TCAACTGGAG GAATCTCCGT GCCTGGCCCC 540 541 ATGGGTCCTT CTGGTCCTCG TGGTCTCCCT GGCCCCCCTG GCGCACCTGG TCCCCAAGGT 600 601 TTCCAAGGCC CCCCTGGTGA GCCTGGCGAG CCTGGAGCCT CAGGTCCCAT GGGTCCCCGT 660 661 GGTCCCCCTG GCCCCCCTGG CAAGAACGGA GATGATGGTG AAGCTGGAAA GCCTGGTCGT 720 721 CCTGGTGAGC GTGGGCCTCC TGGACCTCAG GGTGCTCGGG GATTGCCTGG AACAGCTGGT 780 781 CTTCCTGGAA TGAAGGGACA CAGAGGTTTC AGTGGTTTGG ATGGTGCCAA GGGAGATGCT 840 841 GGTCCTGCTG GTCCCAAGGG TGAGCCCGGT AGCCCTGGTG AAAATGGAGC TCCTGGTCAG 900 901 ATGGGACCCC GTGGTCTGCC TGGTGAGAGA GGTCGCCCTG GAGCCCCTGG CCCTGCTGTA 960 961 AGTACTCCTG GCCCCTTGGG GGACACATTT CCATTTCATT CACAGGGTCC CACTGGCCCT 1020 1021 GCTGGTCCTC CTGGCTTCCC TGGTGCTGTT GGTGCTAAGG GTGAAGCTGG TCCCCAAGGA 1080 1081 GCCCGTGGCT CTGAAGGTCC CCAGGGTGTG CGTGGTGAGC CCGGCCCCCC TGGCCCTGCT 1140 1141 GGTGCTGCTG GCCCTGCTGG AAACCCTGGT GCTGATGGAC AGCCTGGTGC TAAAGGTGCT 1200 1201 AATGGTGCTC CTGGCATTGC TGGTGCTCCC GGCTTCCCCG GTGCCCGAGG CCCTTCTGGA 1260 1261 CCCCAGGGCC CCAGCGGTCC TCCTGGTCCC AAGGGTAACA GCGGGGATGG GAGCCCTCAC 1320 1321 TGCCGGCCTT CCCCTGGCCT CTGCCCTCTC CAGGGCCCCA CTGGTATTCA AGGCCCCCCT 1380 1381 GGCCCTGCTG GGGAAGAAGG AAAGCGAGGA GCCCGAGGTG AACCCGGACC CACTGGCCTG 1440 1441 CCTGGACCCC CCGGCGAGCG TGGCGGACCT GGTAGCCGTG GTTTCCCTGG TGCAGATGGT 1500 1501 GTCGCTGGTC CCAAGGGTCC CGCTGGTGAA CGTGGCTCTC CCGGCCCCGC TGGCCCCAAA 1560 1561 GGTTCCCCTG GTGAAGCGGG TCGTCCCGGT GAAGCTGGTC TGCCTGGTGC CAAGGGTCTG 1620 1621 ACTGGAAGTC CTGGCAGTCC CGGTCCAGAT GGCAAAACTG GCCCCCCTGG TCCCGCTGGT 1680 1681 CAAGATGGTC GCCCTGGCCC CCCAGGCCCC CCCGGTGCCC GTGGTCAGGC CGGCGTGATG 1740 1741 GGTTTCCCTG GGCCTAAAGG TGCTGCTGGA GAGCCTGGCA AGGCTGGAGA GAGAGGTGTG 1800 1801 CCTGGCCCCC CTGGTGCTGT TGGTCCCGCT GGCAAAGACG GAGAAGCTGG GGCTCAGGGA 1860 1861 CCCCCTGGCC CTGCTGGCCC CGCTGGCGAG AGAGGCGAAC AAGGCCCAGC TGGCTCCCCC 1920 1921 GGATTCCAGG GTCTCCCTGG CCCCGCTGGT CCTCCCGGTG AAGCAGGCAA ACCCGGTGAA 1980 1981 CAGGGTGTTC CTGGCGACCT TGGTGCCCCC GGCCCCTCTG GAGCAAGAGG CGAGAGAGGT 2040 2041 TTCCCTGGTG AACGTGGTGT GCAAGGTCCC CCCGGCCCCG CAGGTCCCCG CGGAGCCAAC 2100 2101 GGTGCCCCTG GCAATGACGG TGCTAAGGGT GATGCTGGTG CCCCCGGAGC CCCAGGTAGC 2160 2161 CAGGGCGCTC CTGGACTTCA GGGAATGCCT GGTGAACGAG GCGCAGCTGG GCTTCCCGGC 2220 2221 CCTAAGGGTG ACAGAGGCGA TGCTGGTCCC AAAGGTGCTG ACGGTTCTCC TGGCAAAGAT 2280 2281 GGTGTCCGTG GTCTGACTGG ACCCATTGGT CCTCCTGGCC CCGCCGGTGC CCCTGGTGAC 2340 2341 AAGGGTGAAG CTGGTCCTAG CGGCCCTGCT GGTCCCACTG GAGCTCGTGG CGCCCCCGGA 2400 2401 GACCGTGGTG AGCCTGGTCC CCCCGGCCCT GCTGGCTTCG CTGGCCCCCC TGGTGCTGAT 2460 2461 GGTCAACCCG GTGCTAAAGG CGAACCTGGT GATGCTGGTG CTAAAGGCGA CGCTGGTCCC 2520 2521 CCTGGCCCCG CTGGACCCAC TGGACCCCCT GGCCCCATTG GTAACGTTGG TGCTCCTGGA 2580 2581 CCCAAAGGTG CTCGTGGCAG TGCTGGTCCC CCTGGTGCTA CTGGTTTCCC TGGTGCTGCT 2640 2641 GGCCGAGTCG GTCCCCCCGG CCCCTCTGGA AATGCTGGAC CCCCTGGACC CCCTGGCCCT 2700 2701 GCTGGCAAAG AAGGTGGCAA AGGCCCCCGT GGTGAGACCG GCCCCGCTGG ACGTCCTGGT 2760 2761 GAAGTCGGTC CCCCCGGTCC CCCTGGCCCC GCTGGCGAGA AAGGATCTCC TGGTGCTGAC 2820 2821 GGACCTGCTG GTGCTCCCGG CACTCCCGGA CCTCAAGGCA TTGCTGGACA GCGTGGTGTG 2880 2881 GTCGGCCTGC CCGGTCAGCG AGGAGAGAGA GGCTTCCCCG GTCTTCCTGG CCCCTCTGGT 2940 2941 GAACCTGGCA AGCAAGGTCC TTCCGGAGCA AGTGGGGAGC GTGGCCCCCC TGGTCCCATG 3000 3001 GGCCCCCCTG GATTGGCTGG ACCCCCTGGC GAGTCTGGAC GTGAGGGATC TCCTGGTGCT 3060 3061 GAAGGCTCCC CTGGACGAGA TGGTTCTCCC GGCCCCAAGG GTGACCGTGG TGAGACCGGC 3120 3121 CCTGCTGGAC CTCCTGGTGC CCCTGGTGCT CCTGGTGCCC CTGGCCCCGT CGGCCCCGCT 3180 3181 GGCAAGAGCG GCGACCGTGG TGAGACTGGT CCTGCTGGTC CTGCTGGCCC GATCGGCCCT 3240 3241 GTTGGTGCTC GTGGTCCTGC TGGACCCCAA GGCCCCCGTG GTGACAAGGG TGAGACAGGC 3300 3301 GAACAGGGTG ACAGAGGCAT AAAGGGTCAC CGTGGCTTCT CTGGTCTCCA GGGTCCCCCT 3360 3361 GGTCCTCCTG GCTCTCCTGG TGAACAAGGT CCTTCTGGAG CTTCTGGTCC TGCTGGTCCC 3420 3421 CGAGGTCCCC CCGGCTCTGC CGGTTCTCCT GGCAAAGACG GACTCAACGG TCTCCCAGGC 3480 3481 CCCATTGGCC CCCCTGGTCC TCGTGGTCGT ACTGGTGATG CTGGCCCTGT TGGTCCCCCT 3540 3541 GGCCCTCCTG GACCCCCTGG TCCCCCCGGT CCTCCCAGCG GCGGTTTCGA CTTCAGCTTC 3600 3601 CTGCCCCAGC CACCTCAAGA GAAGGCTCAC GACGGCGGCC GCTACTACCG GGCCGATGAT 3660 3661 GCCAATGTGG TCCGTGACCG TGACCTCGAG GTGGACACCA CCCTCAAGAG CCTGAGCCAG 3720 3721 CAGATCGAGA ACATCCGGAG CCCTGAAGGA AGCCGCAAGA ACCCTGCCCG CACCTGCCGC 3780 3781 GACCTCAAGA TGTGCCACTC CGACTGGAAG AGCGGAGAAT ACTGGATTGA CCCCAACCAA 3840 3841 GGATGCAACC TGGATGCCAT CAAGGTCTTC TGCAACATGG AGACAGGTGA GACCTGCGTG 3900 3901 TACCCCACTC AGCCCCATGT GGCCCAGAAG AACTGGTACA TCAGCAAGAA CCCCAAGGAA 3960 3961 AAGAGGCACG TCTGGTACGG CGAGAGCATG ACCGACGGAT TCCAGTTCGA GTATGGTGGC 4020 4021 CAGGGCTCCG ATCCTGCTGA TGTGGCCATT CAGCTGACGT TCCTGCGCCT GATGTCCACC 4080 4081 GAGGCTTCCC AGAACATCAC CTATCACTGC AAGAACAGCG TGGCCTACAT GGACCAGCAG 4140 4141 ACCGGCAACC TCAAGAAGGC CCTGCTCCTC CAGGGCTCCA ACGAGATCGA GATCCGGGCC 4200 4201 GAGGGCAACA GCCGCTTCAC CTACAGTGTC ACCTACGACG GTTGCACGAG TCACACCGGA 4260 4261 GCCTGGGGCA AGACAGTGAT CGAATACAAA ACCACCAAGA CCTCCCGTTT GCCCATCATC 4320 4321 GATGTGGCAC CATTGGACGT CGGCGCCCCA GACCAGGAAT TCGGCATGGA TGTTGGCCCT 4380 4381 GTCTGCTTCC TG 4392 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Rhb-2149 | Rhinopithecus bieti | 100.0 | 7e-20 | 101 |
LLPS-Hos-1373 | Homo sapiens | 100.0 | 7e-20 | 101 |
LLPS-Pap-1436 | Pan paniscus | 100.0 | 7e-20 | 101 |
LLPS-Pat-1091 | Pan troglodytes | 100.0 | 7e-20 | 101 |
LLPS-Fec-3071 | Felis catus | 100.0 | 6e-20 | 101 |
LLPS-Man-0647 | Macaca nemestrina | 100.0 | 7e-20 | 101 |
LLPS-Caf-1540 | Canis familiaris | 100.0 | 6e-20 | 101 |
LLPS-Poa-3469 | Pongo abelii | 100.0 | 6e-20 | 101 |
LLPS-Gog-4278 | Gorilla gorilla | 100.0 | 6e-20 | 101 |
LLPS-Caj-1606 | Callithrix jacchus | 100.0 | 6e-20 | 101 |
LLPS-Maf-0493 | Macaca fascicularis | 100.0 | 7e-20 | 101 |
LLPS-Chs-1595 | Chlorocebus sabaeus | 100.0 | 7e-20 | 101 |
LLPS-Cea-4564 | Cercocebus atys | 100.0 | 7e-20 | 101 |
LLPS-Aon-0094 | Aotus nancymaae | 100.0 | 6e-20 | 101 |
LLPS-Mal-0925 | Mandrillus leucophaeus | 100.0 | 7e-20 | 101 |
LLPS-Paa-4779 | Papio anubis | 100.0 | 6e-20 | 101 |
LLPS-Mup-0210 | Mustela putorius furo | 100.0 | 7e-20 | 101 |
LLPS-Eqc-1233 | Equus caballus | 99.01 | 5e-20 | 101 |
LLPS-Sus-4814 | Sus scrofa | 99.01 | 1e-19 | 100 |
LLPS-Ova-2769 | Ovis aries | 99.01 | 1e-19 | 100 |
LLPS-Bot-0652 | Bos taurus | 99.01 | 1e-19 | 100 |
LLPS-Myl-1325 | Myotis lucifugus | 98.71 | 3e-18 | 95.9 |
LLPS-Cap-3686 | Cavia porcellus | 98.06 | 2e-18 | 96.3 |
LLPS-Mea-1629 | Mesocricetus auratus | 98.06 | 5e-18 | 95.1 |
LLPS-Otg-1000 | Otolemur garnettii | 98.02 | 2e-19 | 99.8 |
LLPS-Loa-2078 | Loxodonta africana | 98.02 | 3e-19 | 99.0 |
LLPS-Ran-1714 | Rattus norvegicus | 98.02 | 6e-20 | 101 |
LLPS-Mum-4362 | Mus musculus | 97.03 | 2e-19 | 99.8 |
LLPS-Mod-4036 | Monodelphis domestica | 96.13 | 1e-17 | 94.0 |
LLPS-Fud-3772 | Fukomys damarensis | 96.0 | 3e-18 | 95.9 |
LLPS-Cas-1330 | Carlito syrichta | 94.84 | 2e-16 | 89.7 |
LLPS-Sah-3229 | Sarcophilus harrisii | 94.84 | 3e-17 | 92.8 |
LLPS-Gaga-2256 | Gallus gallus | 92.9 | 1e-14 | 84.3 |
LLPS-Anc-1131 | Anolis carolinensis | 92.26 | 2e-15 | 86.7 |
LLPS-Pes-0689 | Pelodiscus sinensis | 89.68 | 2e-15 | 86.3 |
LLPS-Xet-3720 | Xenopus tropicalis | 87.66 | 3e-11 | 72.8 |
LLPS-Scf-2828 | Scleropages formosus | 85.81 | 2e-13 | 80.5 |
LLPS-Lac-3968 | Latimeria chalumnae | 85.54 | 4e-08 | 62.4 |
LLPS-Orn-3572 | Oreochromis niloticus | 83.87 | 1e-13 | 80.5 |
LLPS-Orl-0058 | Oryzias latipes | 83.87 | 7e-11 | 71.6 |
LLPS-Asm-1089 | Astyanax mexicanus | 83.64 | 5e-139 | 470 |
LLPS-Icp-3925 | Ictalurus punctatus | 83.64 | 2e-137 | 466 |
LLPS-Scm-3591 | Scophthalmus maximus | 83.27 | 3e-138 | 469 |
LLPS-Dar-3379 | Danio rerio | 83.12 | 4e-13 | 79.0 |
LLPS-Ten-3290 | Tetraodon nigroviridis | 82.9 | 7e-137 | 465 |
LLPS-Gaa-2774 | Gasterosteus aculeatus | 82.16 | 2e-136 | 463 |
LLPS-Xim-1734 | Xiphophorus maculatus | 80.3 | 3e-132 | 450 |
LLPS-Pof-1701 | Poecilia formosa | 78.95 | 2e-07 | 60.5 |
LLPS-Tar-3405 | Takifugu rubripes | 78.06 | 7e-11 | 71.6 |
LLPS-Ora-1692 | Ornithorhynchus anatinus | 54.0 | 7e-11 | 71.2 |
LLPS-Urm-2475 | Ursus maritimus | 51.72 | 2e-12 | 75.9 |
LLPS-Anp-1765 | Anas platyrhynchos | 48.28 | 2e-11 | 72.8 |
LLPS-Tut-2163 | Tursiops truncatus | 48.28 | 3e-10 | 69.3 |
LLPS-Meg-2792 | Meleagris gallopavo | 46.55 | 2e-10 | 70.1 |
LLPS-Nol-3175 | Nomascus leucogenys | 46.43 | 3e-10 | 69.3 |
LLPS-Ict-1621 | Ictidomys tridecemlineatus | 44.83 | 2e-09 | 66.6 |
LLPS-Dio-3274 | Dipodomys ordii | 44.83 | 9e-10 | 67.8 |
LLPS-Orc-3775 | Oryctolagus cuniculus | 43.1 | 4e-09 | 65.5 |
LLPS-Leo-0311 | Lepisosteus oculatus | 43.1 | 4e-08 | 62.4 |
LLPS-Fia-2157 | Ficedula albicollis | 41.67 | 6e-10 | 67.8 |