LLPS-Mum-3868
Pdf
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Peptide deformylase |
| Gene Name: | |
| Ensembl Gene: | ENSMUSG00000078931.4 |
| Ensembl Protein: | ENSMUSP00000138756.1 |
| Organism: | Mus musculus |
| Taxa ID: | 10090 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Removes the formyl group from the N-terminal Met of newly synthesized proteins. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSMUST00000154271.1 | ENSMUSP00000138756.1 |
| Ensembl | ENSMUST00000055316.9 | ENSMUSP00000138676.1 |
| UniProt | S4R2K0, S4R2K0_MOUSE | |
| GeneBank | AC123868 | |
| RefSeq | NM_026513.2 | NP_080789.2 |
| Entrez | 68023 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MLLLGRLPRP AWVPGSRAQR CSSLAALEGP ARTRSYWRYL RRLVCGAPQP PYAHVCQVGD 60 61 PVLRVVAAPV EPEQLAGPEL QRLVGRMVQV MRRRGCVGLS APQLGVPLQV LALEFPDKLL 120 121 RAFSPRLREL RQMEPFPLRV LVNPSLRVLD SRLVTFPEGC ESVAGFLACV PRFQAVQISG 180 181 LDPKGEPVVW SASGWTARII QHEMDHLQGC LFIDKMDSGT FTNLHWMEVN D 231 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTTGCTGC TGGGCAGGCT GCCGCGGCCG GCGTGGGTTC CGGGGAGCCG GGCGCAGAGG 60 61 TGCAGCTCCT TGGCCGCCTT GGAGGGCCCG GCGCGCACGC GCTCCTACTG GCGGTACCTC 120 121 AGGCGCCTTG TATGTGGCGC GCCGCAGCCG CCATACGCGC ACGTGTGCCA GGTCGGGGAC 180 181 CCGGTGCTGC GCGTCGTGGC GGCCCCGGTG GAACCCGAGC AGCTAGCGGG GCCGGAGCTG 240 241 CAGCGGCTGG TGGGGCGGAT GGTGCAGGTA ATGCGACGGC GTGGCTGTGT GGGCCTTAGT 300 301 GCGCCGCAGC TCGGGGTGCC GCTGCAAGTG TTGGCGCTCG AGTTCCCGGA CAAGCTCCTC 360 361 CGAGCCTTCT CACCGCGCCT GCGCGAACTG CGTCAGATGG AACCCTTCCC ACTTCGGGTG 420 421 CTGGTGAACC CCAGTCTGAG AGTGTTGGAC AGCCGCTTGG TCACCTTCCC CGAGGGCTGC 480 481 GAGAGTGTCG CCGGCTTTCT GGCGTGTGTG CCTCGCTTCC AAGCCGTGCA GATCTCAGGA 540 541 CTGGACCCAA AAGGAGAGCC AGTGGTGTGG TCGGCAAGTG GTTGGACAGC TCGAATCATC 600 601 CAGCATGAGA TGGATCACTT GCAGGGCTGC TTGTTCATCG ACAAAATGGA CAGTGGGACA 660 661 TTTACCAATC TCCACTGGAT GGAGGTGAAT GACTAA 696 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Mitochondrion | |
Molecular Function | Metal ion binding | |
Molecular Function | Peptide deformylase activity | |
Biological Process | Co-translational protein modification | |
Biological Process | N-terminal protein amino acid modification | |
Biological Process | Peptidyl-methionine modification | |
Biological Process | Positive regulation of cell population proliferation | |
Biological Process | Translation |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Ran-0118 | Rattus norvegicus | 90.48 | 9e-137 | 390 |
| LLPS-Fud-3699 | Fukomys damarensis | 89.71 | 4e-83 | 251 |
| LLPS-Myl-1028 | Myotis lucifugus | 87.76 | 2e-110 | 323 |
| LLPS-Loa-1798 | Loxodonta africana | 85.05 | 4e-116 | 339 |
| LLPS-Cas-2158 | Carlito syrichta | 84.9 | 5e-100 | 297 |
| LLPS-Cap-4592 | Cavia porcellus | 84.79 | 5e-116 | 338 |
| LLPS-Caf-2324 | Canis familiaris | 84.55 | 2e-116 | 340 |
| LLPS-Eqc-4693 | Equus caballus | 83.78 | 4e-117 | 342 |
| LLPS-Fec-0287 | Felis catus | 83.64 | 3e-116 | 338 |
| LLPS-Ict-1562 | Ictidomys tridecemlineatus | 83.64 | 4e-114 | 334 |
| LLPS-Ova-0230 | Ovis aries | 82.73 | 8e-115 | 336 |
| LLPS-Bot-0633 | Bos taurus | 82.73 | 2e-115 | 337 |
| LLPS-Cea-1678 | Cercocebus atys | 81.78 | 2e-107 | 317 |
| LLPS-Hos-3668 | Homo sapiens | 81.31 | 2e-107 | 317 |
| LLPS-Pat-4095 | Pan troglodytes | 81.31 | 6e-108 | 318 |
| LLPS-Chs-3799 | Chlorocebus sabaeus | 80.84 | 2e-106 | 314 |
| LLPS-Caj-2375 | Callithrix jacchus | 80.58 | 1e-103 | 307 |
| LLPS-Paa-3349 | Papio anubis | 80.45 | 2e-106 | 314 |
| LLPS-Aon-1199 | Aotus nancymaae | 80.1 | 9e-104 | 307 |
| LLPS-Maf-4415 | Macaca fascicularis | 80.0 | 6e-106 | 313 |
| LLPS-Mal-1811 | Mandrillus leucophaeus | 80.0 | 1e-105 | 312 |
| LLPS-Man-1905 | Macaca nemestrina | 80.0 | 4e-106 | 313 |
| LLPS-Tut-0400 | Tursiops truncatus | 79.28 | 1e-111 | 327 |
| LLPS-Poa-3649 | Pongo abelii | 78.74 | 8e-100 | 296 |
| LLPS-Nol-1151 | Nomascus leucogenys | 78.7 | 8e-101 | 300 |
| LLPS-Rhb-3224 | Rhinopithecus bieti | 78.4 | 9e-96 | 287 |
| LLPS-Sah-2532 | Sarcophilus harrisii | 77.04 | 3e-69 | 216 |
| LLPS-Mod-3034 | Monodelphis domestica | 66.83 | 7e-87 | 264 |
| LLPS-Fia-3472 | Ficedula albicollis | 64.71 | 5e-54 | 178 |
| LLPS-Tag-1779 | Taeniopygia guttata | 63.64 | 2e-51 | 170 |
| LLPS-Leo-3418 | Lepisosteus oculatus | 60.0 | 4e-81 | 249 |
| LLPS-Anc-3006 | Anolis carolinensis | 59.6 | 8e-78 | 239 |
| LLPS-Scf-2240 | Scleropages formosus | 58.71 | 9e-75 | 234 |
| LLPS-Xet-0575 | Xenopus tropicalis | 57.71 | 4e-77 | 239 |
| LLPS-Xim-3886 | Xiphophorus maculatus | 57.0 | 5e-69 | 219 |
| LLPS-Dar-0426 | Danio rerio | 56.5 | 2e-73 | 230 |
| LLPS-Pof-3794 | Poecilia formosa | 56.5 | 2e-63 | 204 |
| LLPS-Orn-3924 | Oreochromis niloticus | 56.31 | 1e-77 | 241 |
| LLPS-Orl-1889 | Oryzias latipes | 56.19 | 9e-78 | 241 |
| LLPS-Lac-1496 | Latimeria chalumnae | 56.14 | 2e-83 | 255 |
| LLPS-Ten-2608 | Tetraodon nigroviridis | 56.13 | 1e-75 | 234 |
| LLPS-Gaa-3582 | Gasterosteus aculeatus | 56.0 | 1e-72 | 227 |
| LLPS-Asm-0998 | Astyanax mexicanus | 55.5 | 6e-75 | 234 |
| LLPS-Tar-3062 | Takifugu rubripes | 55.5 | 5e-73 | 229 |
| LLPS-Icp-2066 | Ictalurus punctatus | 54.5 | 2e-70 | 223 |
| LLPS-Scm-1643 | Scophthalmus maximus | 54.0 | 5e-72 | 227 |
| LLPS-Gaga-3533 | Gallus gallus | 53.91 | 3e-64 | 206 |
| LLPS-Ors-0728 | Oryza sativa | 48.39 | 2e-22 | 94.0 |
| LLPS-Ori-2324 | Oryza indica | 45.6 | 5e-30 | 115 |
| LLPS-Php-0872 | Physcomitrella patens | 44.64 | 1e-33 | 127 |
| LLPS-Mua-1752 | Musa acuminata | 43.94 | 4e-30 | 115 |
| LLPS-Sei-1218 | Setaria italica | 43.71 | 2e-32 | 124 |
| LLPS-Orbr-1940 | Oryza brachyantha | 43.71 | 7e-30 | 119 |
| LLPS-Brd-2303 | Brachypodium distachyon | 43.64 | 5e-32 | 123 |
| LLPS-Orni-0318 | Oryza nivara | 43.11 | 4e-31 | 120 |
| LLPS-Orb-1711 | Oryza barthii | 43.11 | 4e-31 | 120 |
| LLPS-Org-1380 | Oryza glaberrima | 43.11 | 4e-31 | 120 |
| LLPS-Zem-1023 | Zea mays | 43.11 | 2e-30 | 118 |
| LLPS-Orr-1038 | Oryza rufipogon | 43.11 | 4e-31 | 120 |
| LLPS-Drm-1890 | Drosophila melanogaster | 42.54 | 1e-45 | 157 |
| LLPS-Orgl-2243 | Oryza glumaepatula | 42.51 | 6e-31 | 120 |
| LLPS-Prp-1417 | Prunus persica | 42.05 | 5e-33 | 126 |
| LLPS-Sob-2543 | Sorghum bicolor | 41.32 | 1e-29 | 116 |
| LLPS-Glm-1031 | Glycine max | 41.14 | 3e-32 | 123 |
| LLPS-Lep-0490 | Leersia perrieri | 41.14 | 7e-31 | 122 |
| LLPS-Hov-2141 | Hordeum vulgare | 41.04 | 2e-31 | 121 |
| LLPS-Brn-2783 | Brassica napus | 40.91 | 1e-31 | 122 |
| LLPS-Brr-2808 | Brassica rapa | 40.91 | 2e-31 | 121 |
| LLPS-Hea-1639 | Helianthus annuus | 40.45 | 8e-33 | 125 |
| LLPS-Mae-0342 | Manihot esculenta | 40.34 | 1e-32 | 125 |
| LLPS-Bro-0989 | Brassica oleracea | 40.34 | 3e-31 | 121 |
| LLPS-Dac-1436 | Daucus carota | 40.11 | 3e-32 | 124 |
| LLPS-Arl-0323 | Arabidopsis lyrata | 40.11 | 9e-31 | 120 |
| LLPS-Coc-2143 | Corchorus capsularis | 40.11 | 4e-32 | 123 |
| LLPS-Tra-0792 | Triticum aestivum | 40.0 | 6e-31 | 120 |
| LLPS-Met-2418 | Medicago truncatula | 40.0 | 9e-33 | 125 |
| LLPS-Pot-0061 | Populus trichocarpa | 40.0 | 5e-31 | 121 |
| LLPS-Tru-1985 | Triticum urartu | 40.0 | 7e-31 | 120 |
| LLPS-Gor-0678 | Gossypium raimondii | 39.89 | 2e-31 | 122 |
| LLPS-Thc-2414 | Theobroma cacao | 39.77 | 1e-31 | 122 |
| LLPS-Cus-1915 | Cucumis sativus | 39.64 | 2e-31 | 121 |
| LLPS-Art-0645 | Arabidopsis thaliana | 39.55 | 2e-29 | 116 |
| LLPS-Osl-0634 | Ostreococcus lucimarinus | 39.08 | 5e-26 | 107 |
| LLPS-Via-0130 | Vigna angularis | 38.86 | 1e-30 | 119 |
| LLPS-Phv-2489 | Phaseolus vulgaris | 38.86 | 5e-31 | 120 |
| LLPS-Vir-1364 | Vigna radiata | 38.73 | 5e-30 | 119 |
| LLPS-Sol-0230 | Solanum lycopersicum | 38.64 | 2e-30 | 119 |
| LLPS-Sot-1836 | Solanum tuberosum | 38.64 | 4e-30 | 118 |
| LLPS-Viv-1169 | Vitis vinifera | 38.59 | 5e-34 | 129 |
| LLPS-Chr-0210 | Chlamydomonas reinhardtii | 38.55 | 7e-25 | 103 |
| LLPS-Amt-2300 | Amborella trichopoda | 38.29 | 1e-29 | 117 |
| LLPS-Nia-2121 | Nicotiana attenuata | 38.07 | 2e-28 | 114 |
| LLPS-Orp-1143 | Oryza punctata | 36.68 | 7e-25 | 104 |
| LLPS-Sem-0603 | Selaginella moellendorffii | 31.37 | 5e-10 | 59.7 |