LLPS-Mua-0352
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Nuclear pore complex protein |
| Ensembl Gene: | GSMUA_Achr11G18260_001 |
| Ensembl Protein: | GSMUA_Achr11P18260_001 |
| Organism: | Musa acuminata |
| Taxa ID: | 214687 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Nuclear pore complex, Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Functions as a component of the nuclear pore complex (NPC). |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | GSMUA_Achr11T18260_001 | GSMUA_Achr11P18260_001 |
| UniProt | M0RTA6, M0RTA6_MUSAM |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MILPEVLAFL YLNWFHHTAG NEELPGNLLV TPTTSHQEAC RFVMMDHTAQ LCLRIVLWLE 60 61 GLASESLDLA KKVRGSHVGS YFPSSGVWHH TQRYLKKMSG DPAIVQHMDF DASTREVAQP 120 121 ILDDKKQDEL LLEDIWTLLR AGRLEEACEL CRSAGQPWRA ASLCPFGGFD HFPSVEAMHK 180 181 NGKMRTLQAF ELESGIGHQW RLWRWASYCA SEKIAEQDGG RYEMAVYASQ SSNLRRLLPI 240 241 CTDWESACWA MAKSWLDVQV DSILAQFQQA RLEGKQFGED INGSSMQGLS STASSENWPC 300 301 HVLDQQPRDL PALLQKLHSS EVVHEAVSRA CEEQHRQIEM NLMLGDMAHL LELLWAWISP 360 361 SEDNQNILRP HGDPEMLRFG AHVVLVLRNL LDDDMKDAFK EKLTTVGDLI LHMYAMYLFS 420 421 KQHEELVGVY ASQLARHLCV DLFVEMMELR LNSSMHVKYK LFLLGMEYLP FSSEDDSKAC 480 481 FEDILERVLL RSRETKPSKP VGKLSDVAEE HRLQSLQKAM VIQWLCFTPP STIRDVEVIS 540 541 AKLLMRALMH SNTLFREFAL ISMWRVPKMP IGAHMLLSFL AEPLKQPNFD EDDASEDLHE 600 601 FEDWREYYAC DATYRNWLKF ELENAAIAPA ELSSEEKDRA AATALETLDS SLSLLLREGN 660 661 PWLNVAHDRT YDPTEDMYIE LHATAMLCLP SGECMLPDAT SCTTLTSALY SSVSEDDVLK 720 721 RQLRVNVAVS SSDNYRIEVA LHCLAVNGDG LGLHEANDGG LLATVIAAGF KGELNRFQPG 780 781 VTMEISRLDA WYSSEDGSFR SPANYIVKGL CRRCCLPELI LRCMQVSVSL AETRDLKDHH 840 841 NELIELVASS EYGILHLFSQ HQLQEFLLFE REFSLYGMEV EEESVVDT 888 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGATACTTC CTGAAGTTTT AGCTTTTCTA TATTTGAATT GGTTTCACCA TACTGCAGGA 60 61 AATGAAGAGC TTCCTGGAAA CCTCCTTGTG ACACCAACAA CATCACATCA GGAAGCCTGC 120 121 CGTTTTGTAA TGATGGATCA TACGGCACAA CTATGCCTTC GAATTGTCCT TTGGCTAGAA 180 181 GGTCTTGCCT CAGAATCTCT TGATTTAGCA AAGAAGGTGA GAGGGTCTCA TGTTGGCTCC 240 241 TATTTTCCAA GCTCTGGTGT TTGGCATCAT ACACAGAGGT ATTTAAAGAA AATGAGTGGT 300 301 GATCCAGCGA TAGTTCAGCA CATGGATTTT GATGCCTCAA CACGTGAAGT AGCTCAACCA 360 361 ATTTTGGATG ACAAAAAGCA AGATGAATTA TTGCTGGAAG ATATCTGGAC TTTACTTCGA 420 421 GCAGGGAGAT TGGAAGAGGC ATGCGAATTA TGTCGTTCTG CAGGGCAGCC TTGGAGAGCT 480 481 GCAAGTCTTT GCCCCTTTGG AGGGTTTGAC CATTTCCCTT CTGTTGAAGC CATGCACAAA 540 541 AATGGTAAGA TGAGAACTTT GCAAGCCTTT GAATTGGAAA GTGGCATAGG TCACCAATGG 600 601 CGTCTTTGGA GGTGGGCATC ATATTGTGCC TCGGAGAAAA TTGCAGAACA GGATGGTGGA 660 661 AGGTATGAGA TGGCTGTCTA TGCTTCACAG TCTAGTAACT TGAGACGTTT GCTGCCTATC 720 721 TGTACTGACT GGGAGTCAGC TTGTTGGGCA ATGGCAAAAT CCTGGCTTGA TGTCCAAGTT 780 781 GACTCTATAT TAGCTCAGTT TCAACAAGCT AGACTGGAAG GCAAACAATT TGGCGAAGAT 840 841 ATAAATGGGT CTTCCATGCA AGGATTATCT TCTACAGCAA GTTCAGAAAA CTGGCCTTGT 900 901 CATGTGCTTG ATCAGCAACC ACGGGATCTT CCAGCACTTC TTCAAAAACT TCATTCAAGT 960 961 GAAGTTGTAC ATGAAGCTGT CTCCAGAGCT TGTGAAGAAC AGCATCGACA AATTGAGATG 1020 1021 AATCTCATGC TGGGAGATAT GGCACATCTT CTAGAGCTAC TTTGGGCATG GATATCACCT 1080 1081 TCAGAAGATA ATCAGAATAT CCTGAGGCCT CATGGTGATC CTGAAATGTT ACGCTTTGGA 1140 1141 GCACATGTGG TTCTTGTTCT TCGGAATTTG CTTGATGATG ACATGAAGGA TGCTTTCAAG 1200 1201 GAGAAGCTTA CGACTGTTGG TGATCTCATA CTTCACATGT ATGCAATGTA TTTATTTTCT 1260 1261 AAGCAACATG AGGAGTTGGT TGGAGTATAT GCCTCTCAGC TTGCCCGTCA CCTTTGTGTT 1320 1321 GATCTCTTTG TCGAAATGAT GGAGCTCAGA CTAAACAGCA GTATGCATGT TAAATACAAG 1380 1381 CTCTTCCTTT TGGGTATGGA GTATCTACCT TTCTCTTCAG AAGATGACTC TAAGGCATGT 1440 1441 TTTGAAGACA TCCTAGAAAG GGTGCTCTTG AGATCACGGG AAACGAAACC TAGCAAGCCT 1500 1501 GTTGGAAAAT TGTCTGATGT TGCGGAAGAG CATCGTTTGC AATCTCTTCA GAAAGCTATG 1560 1561 GTTATTCAGT GGCTCTGTTT CACACCACCT TCTACTATAA GGGATGTTGA GGTTATCAGT 1620 1621 GCAAAGCTTC TTATGAGGGC ATTGATGCAT AGCAACACAC TATTCAGGGA GTTTGCTCTG 1680 1681 ATATCTATGT GGAGAGTTCC TAAAATGCCA ATTGGAGCTC ATATGTTGCT CAGTTTCTTG 1740 1741 GCGGAACCAT TAAAACAGCC TAATTTTGAT GAAGACGACG CCAGTGAGGA TCTGCATGAG 1800 1801 TTTGAAGACT GGCGTGAGTA TTACGCATGC GATGCAACAT ATCGGAATTG GCTCAAGTTT 1860 1861 GAGCTTGAGA ATGCAGCTAT TGCACCTGCT GAACTTTCTT CAGAAGAAAA GGATAGAGCT 1920 1921 GCTGCCACAG CTTTAGAAAC ACTAGATTCT TCTCTGTCAC TATTGCTGAG AGAAGGAAAC 1980 1981 CCATGGCTGA ATGTTGCTCA TGATAGAACA TATGATCCAA CAGAGGATAT GTATATTGAA 2040 2041 TTGCATGCAA CTGCAATGCT CTGTCTGCCT TCTGGTGAGT GCATGCTCCC AGATGCGACC 2100 2101 TCTTGTACTA CATTGACCAG TGCACTTTAC TCCTCCGTCA GTGAAGATGA CGTGTTAAAA 2160 2161 CGCCAATTGA GGGTCAATGT TGCGGTTTCC TCAAGTGACA ACTATCGCAT TGAAGTCGCA 2220 2221 CTTCACTGCT TGGCAGTGAA TGGTGATGGG CTTGGACTTC ATGAAGCTAA TGATGGAGGT 2280 2281 CTTCTTGCTA CTGTCATAGC TGCAGGTTTT AAAGGTGAGC TTAATCGGTT TCAACCTGGA 2340 2341 GTTACAATGG AAATATCCCG GCTTGATGCT TGGTACTCAT CCGAGGATGG TTCCTTCAGA 2400 2401 AGCCCTGCTA ATTACATAGT GAAGGGGCTT TGCCGAAGAT GTTGCCTGCC AGAGCTCATT 2460 2461 CTCCGATGTA TGCAGGTGTC AGTTTCTCTT GCTGAAACAC GTGATTTAAA AGATCACCAT 2520 2521 AATGAATTAA TTGAATTAGT TGCCTCCTCC GAGTATGGGA TTCTGCATTT GTTTAGTCAA 2580 2581 CACCAATTAC AGGAATTTTT ATTGTTTGAA AGGGAATTTT CACTATACGG AATGGAGGTT 2640 2641 GAAGAAGAGT CTGTCGTTGA CACCTGA 2667 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Nuclear membrane | |
Cellular Component | Nuclear pore outer ring | |
Molecular Function | Structural constituent of nuclear pore | |
Biological Process | MRNA export from nucleus | |
Biological Process | Posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | |
Biological Process | Protein import into nucleus |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Nia-0949 | Nicotiana attenuata | 74.01 | 4e-82 | 268 |
| LLPS-Brd-0622 | Brachypodium distachyon | 71.04 | 0.0 | 1171 |
| LLPS-Orm-1397 | Oryza meridionalis | 70.95 | 0.0 | 1207 |
| LLPS-Orgl-1944 | Oryza glumaepatula | 70.72 | 0.0 | 1204 |
| LLPS-Ori-0059 | Oryza indica | 70.72 | 0.0 | 1202 |
| LLPS-Orb-0063 | Oryza barthii | 70.66 | 0.0 | 1210 |
| LLPS-Orni-0118 | Oryza nivara | 70.61 | 0.0 | 1201 |
| LLPS-Orr-1556 | Oryza rufipogon | 70.61 | 0.0 | 1202 |
| LLPS-Mae-0806 | Manihot esculenta | 70.23 | 0.0 | 1209 |
| LLPS-Orbr-0274 | Oryza brachyantha | 69.92 | 0.0 | 1189 |
| LLPS-Viv-0499 | Vitis vinifera | 69.9 | 0.0 | 1189 |
| LLPS-Prp-0056 | Prunus persica | 68.89 | 0.0 | 1164 |
| LLPS-Sei-0774 | Setaria italica | 68.76 | 0.0 | 1162 |
| LLPS-Hov-1092 | Hordeum vulgare | 68.67 | 0.0 | 1159 |
| LLPS-Gor-1084 | Gossypium raimondii | 68.66 | 0.0 | 1165 |
| LLPS-Sob-1753 | Sorghum bicolor | 68.6 | 0.0 | 1153 |
| LLPS-Thc-0246 | Theobroma cacao | 68.56 | 0.0 | 1177 |
| LLPS-Pot-0081 | Populus trichocarpa | 68.24 | 0.0 | 1161 |
| LLPS-Ors-2095 | Oryza sativa | 67.81 | 0.0 | 618 |
| LLPS-Glm-0882 | Glycine max | 67.68 | 0.0 | 1071 |
| LLPS-Via-0736 | Vigna angularis | 67.55 | 0.0 | 1032 |
| LLPS-Tru-0492 | Triticum urartu | 67.54 | 0.0 | 1135 |
| LLPS-Phv-0381 | Phaseolus vulgaris | 67.01 | 0.0 | 1122 |
| LLPS-Zem-0422 | Zea mays | 66.94 | 0.0 | 1101 |
| LLPS-Sol-0436 | Solanum lycopersicum | 66.89 | 0.0 | 1163 |
| LLPS-Brn-2831 | Brassica napus | 66.78 | 0.0 | 1137 |
| LLPS-Brr-1354 | Brassica rapa | 66.7 | 0.0 | 1142 |
| LLPS-Bro-1318 | Brassica oleracea | 66.59 | 0.0 | 1139 |
| LLPS-Dac-0405 | Daucus carota | 66.07 | 0.0 | 1135 |
| LLPS-Amt-0668 | Amborella trichopoda | 65.51 | 0.0 | 1136 |
| LLPS-Orp-0190 | Oryza punctata | 65.33 | 0.0 | 1069 |
| LLPS-Hea-0042 | Helianthus annuus | 65.05 | 0.0 | 1073 |
| LLPS-Met-0186 | Medicago truncatula | 64.98 | 0.0 | 1100 |
| LLPS-Arl-0743 | Arabidopsis lyrata | 64.72 | 0.0 | 1132 |
| LLPS-Art-0044 | Arabidopsis thaliana | 64.56 | 0.0 | 1134 |
| LLPS-Cus-0704 | Cucumis sativus | 64.35 | 0.0 | 1095 |
| LLPS-Coc-0239 | Corchorus capsularis | 64.35 | 7e-171 | 517 |
| LLPS-Lep-1455 | Leersia perrieri | 64.12 | 0.0 | 1066 |
| LLPS-Vir-0291 | Vigna radiata | 58.12 | 0.0 | 919 |
| LLPS-Sot-1967 | Solanum tuberosum | 50.7 | 1e-08 | 58.2 |
| LLPS-Php-0937 | Physcomitrella patens | 49.66 | 0.0 | 764 |
| LLPS-Sem-0893 | Selaginella moellendorffii | 44.34 | 0.0 | 620 |
| LLPS-Chr-1317 | Chlamydomonas reinhardtii | 28.77 | 1e-10 | 68.6 |
| LLPS-Chc-0038 | Chondrus crispus | 28.7 | 2e-07 | 59.3 |
| LLPS-Gaa-0174 | Gasterosteus aculeatus | 28.68 | 1e-18 | 95.9 |
| LLPS-Mel-0041 | Melampsora laricipopulina | 28.29 | 7e-08 | 60.5 |
| LLPS-Scm-1602 | Scophthalmus maximus | 28.01 | 6e-17 | 90.1 |
| LLPS-Orl-1124 | Oryzias latipes | 27.75 | 4e-16 | 87.8 |
| LLPS-Scc-1030 | Schizosaccharomyces cryophilus | 27.13 | 2e-08 | 62.4 |
| LLPS-Anc-0395 | Anolis carolinensis | 27.03 | 1e-18 | 95.9 |
| LLPS-Asm-2360 | Astyanax mexicanus | 26.7 | 4e-22 | 106 |
| LLPS-Mea-1496 | Mesocricetus auratus | 26.53 | 2e-21 | 104 |
| LLPS-Leo-1078 | Lepisosteus oculatus | 26.37 | 3e-19 | 97.4 |
| LLPS-Loa-0191 | Loxodonta africana | 26.26 | 1e-20 | 102 |
| LLPS-Anp-0187 | Anas platyrhynchos | 26.25 | 8e-22 | 105 |
| LLPS-Ora-1760 | Ornithorhynchus anatinus | 26.1 | 6e-20 | 99.8 |
| LLPS-Meg-2145 | Meleagris gallopavo | 26.1 | 9e-23 | 108 |
| LLPS-Dio-0009 | Dipodomys ordii | 26.08 | 1e-22 | 108 |
| LLPS-Ova-2810 | Ovis aries | 26.02 | 4e-21 | 103 |
| LLPS-Bot-1589 | Bos taurus | 26.02 | 5e-21 | 103 |
| LLPS-Sus-0153 | Sus scrofa | 26.01 | 2e-22 | 108 |
| LLPS-Otg-2095 | Otolemur garnettii | 25.98 | 2e-20 | 101 |
| LLPS-Pes-0727 | Pelodiscus sinensis | 25.98 | 8e-22 | 105 |
| LLPS-Caj-0549 | Callithrix jacchus | 25.96 | 3e-21 | 103 |
| LLPS-Aon-0503 | Aotus nancymaae | 25.95 | 4e-21 | 103 |
| LLPS-Gaga-0973 | Gallus gallus | 25.9 | 7e-22 | 105 |
| LLPS-Mup-1682 | Mustela putorius furo | 25.86 | 1e-22 | 108 |
| LLPS-Rhb-1687 | Rhinopithecus bieti | 25.86 | 2e-21 | 104 |
| LLPS-Myl-0097 | Myotis lucifugus | 25.81 | 8e-22 | 105 |
| LLPS-Poa-0506 | Pongo abelii | 25.78 | 4e-21 | 103 |
| LLPS-Hos-1595 | Homo sapiens | 25.78 | 2e-20 | 101 |
| LLPS-Pat-0091 | Pan troglodytes | 25.78 | 7e-21 | 102 |
| LLPS-Pap-0112 | Pan paniscus | 25.78 | 3e-21 | 103 |
| LLPS-Dar-0163 | Danio rerio | 25.75 | 2e-20 | 100 |
| LLPS-Scf-2412 | Scleropages formosus | 25.73 | 7e-21 | 102 |
| LLPS-Tar-1060 | Takifugu rubripes | 25.7 | 6e-17 | 90.1 |
| LLPS-Urm-1042 | Ursus maritimus | 25.68 | 1e-22 | 108 |
| LLPS-Fec-2551 | Felis catus | 25.68 | 3e-20 | 100 |
| LLPS-Fud-0904 | Fukomys damarensis | 25.65 | 3e-21 | 103 |
| LLPS-Man-1420 | Macaca nemestrina | 25.63 | 2e-19 | 98.2 |
| LLPS-Xet-0200 | Xenopus tropicalis | 25.62 | 5e-16 | 87.4 |
| LLPS-Cap-2076 | Cavia porcellus | 25.61 | 2e-18 | 94.7 |
| LLPS-Scj-0681 | Schizosaccharomyces japonicus | 25.56 | 6e-06 | 54.3 |
| LLPS-Caf-1983 | Canis familiaris | 25.51 | 2e-22 | 107 |
| LLPS-Eqc-0188 | Equus caballus | 25.51 | 1e-20 | 102 |
| LLPS-Cii-0341 | Ciona intestinalis | 25.46 | 2e-10 | 69.3 |
| LLPS-Mum-0016 | Mus musculus | 25.45 | 1e-21 | 105 |
| LLPS-Fia-1139 | Ficedula albicollis | 25.42 | 2e-22 | 107 |
| LLPS-Aim-0389 | Ailuropoda melanoleuca | 25.3 | 9e-21 | 102 |
| LLPS-Mal-0615 | Mandrillus leucophaeus | 25.24 | 1e-21 | 105 |
| LLPS-Paa-1516 | Papio anubis | 25.24 | 1e-21 | 105 |
| LLPS-Cea-0281 | Cercocebus atys | 25.24 | 1e-21 | 105 |
| LLPS-Maf-0518 | Macaca fascicularis | 25.24 | 2e-21 | 104 |
| LLPS-Chs-0325 | Chlorocebus sabaeus | 25.24 | 1e-21 | 105 |
| LLPS-Mam-0006 | Macaca mulatta | 25.24 | 2e-21 | 104 |
| LLPS-Ict-0347 | Ictidomys tridecemlineatus | 25.17 | 2e-21 | 104 |
| LLPS-Orc-1764 | Oryctolagus cuniculus | 25.17 | 2e-21 | 104 |
| LLPS-Gog-0161 | Gorilla gorilla | 25.09 | 1e-20 | 102 |
| LLPS-Nol-0628 | Nomascus leucogenys | 25.09 | 5e-21 | 103 |
| LLPS-Sah-0067 | Sarcophilus harrisii | 25.04 | 4e-17 | 90.5 |
| LLPS-Tag-2093 | Taeniopygia guttata | 25.04 | 4e-22 | 107 |
| LLPS-Pof-1560 | Poecilia formosa | 24.82 | 4e-16 | 87.8 |
| LLPS-Ran-0061 | Rattus norvegicus | 24.59 | 5e-20 | 100 |
| LLPS-Cas-0744 | Carlito syrichta | 24.39 | 1e-20 | 102 |
| LLPS-Lac-1869 | Latimeria chalumnae | 24.29 | 2e-11 | 72.0 |
| LLPS-Osl-0360 | Ostreococcus lucimarinus | 23.73 | 1e-20 | 102 |