LLPS-Lac-1108
RBM45
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Uncharacterized protein |
Gene Name: | RBM45 |
Ensembl Gene: | ENSLACG00000003728.1 |
Ensembl Protein: | ENSLACP00000004192.1 |
Organism: | Latimeria chalumnae |
Taxa ID: | 7897 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
DNA damage foci, PML nuclear body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSLACT00000004229.1 | ENSLACP00000004192.1 |
UniProt | H3A3H1, H3A3H1_LATCH | |
GeneBank | AFYH01241420, AFYH01241423, AFYH01241424, AFYH01241421, AFYH01241422 | |
RefSeq | XM_006012287.1 | XP_006012349.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MEEGNNFKPS VDNLDDPPNS RVFLVISKST PKEVIREKFS PFGEIQDIWV VKDKQTKERK 60 61 GVAFVKFARS SQACRAMEEM HGRSLSDDTK PIKVFIAQSR ASGSHRDVED EELTRIFVMI 120 121 PKSYTEDDLR EKFKAYGDIE YCSIIKNKNT GESKGLGYVR YLKPSEAALA IENCDRNFRA 180 181 ILAEPKNKAL PFSESEYYVG SSGNGGGRQQ EHIGQPDPGI NMLQFAEFYS FGKNDLRDHE 240 241 NISKCLSVAS RVCLTQEQLF NLFDLIPGLE YCEVQRDPYS GYNKGQALVR YNNVASAIYA 300 301 REKLHGFDYP PGNMLVVTYF DDGSSRSNSV GIMASQLVAA QMMSMVCTSP VGQQIVKTAS 360 361 DYGESSSSYT PRIQSDVVLP PPQKFASTDS RVKERLFLVF NPAPLPLDIL EDVFCRFGYL 420 421 IEVYLVPGRN VGYAKFANRT SANDAITAIH GKVINGVKLK VMLADPPKEE SYKRQRTH 478 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGAGGAAG GGAACAACTT CAAGCCATCG GTGGACAACC TAGACGACCC GCCCAACAGC 60 61 AGGGTCTTTC TAGTGATCAG CAAGTCCACC CCGAAGGAAG TCATCCGGGA GAAATTCTCC 120 121 CCCTTTGGGG AGATCCAGGA TATCTGGGTG GTGAAAGACA AGCAAACGAA GGAGCGCAAA 180 181 GGGGTGGCTT TTGTGAAGTT TGCTAGATCG TCGCAGGCGT GCCGAGCCAT GGAGGAGATG 240 241 CACGGCAGGA GCTTGAGTGA CGACACCAAA CCCATCAAGG TGTTTATTGC CCAGTCAAGA 300 301 GCCTCTGGAA GCCACAGGGA TGTTGAGGAT GAAGAACTTA CAAGAATATT TGTCATGATT 360 361 CCAAAATCAT ATACAGAAGA TGATCTGAGG GAGAAGTTTA AGGCCTATGG GGACATTGAA 420 421 TATTGCAGCA TTATTAAGAA CAAAAACACA GGAGAAAGTA AAGGACTGGG ATACGTAAGA 480 481 TACCTAAAGC CATCAGAAGC TGCCCTGGCC ATAGAGAATT GCGATCGAAA CTTCAGAGCA 540 541 ATCCTAGCTG AGCCCAAAAA TAAGGCCCTG CCCTTCTCAG AGAGTGAATA TTATGTTGGC 600 601 AGCAGTGGCA ATGGTGGTGG TAGACAACAG GAACACATTG GACAACCTGA TCCAGGAATC 660 661 AACATGCTTC AATTTGCTGA ATTTTACAGC TTTGGAAAGA ATGACTTAAG GGATCACGAA 720 721 AACATCTCCA AATGCCTATC AGTTGCATCA CGGGTTTGTC TGACACAGGA GCAGCTATTT 780 781 AATCTTTTTG ACCTTATCCC AGGACTGGAG TACTGTGAAG TTCAGAGAGA TCCATACTCT 840 841 GGATATAATA AAGGGCAAGC ACTGGTGAGG TATAACAATG TGGCGTCAGC TATTTACGCA 900 901 CGAGAAAAGC TCCATGGGTT TGACTATCCC CCTGGAAATA TGCTTGTGGT GACCTACTTT 960 961 GATGATGGGA GTAGCAGATC TAACTCAGTG GGAATAATGG CCTCGCAGCT TGTGGCTGCA 1020 1021 CAGATGATGT CCATGGTGTG TACTAGTCCA GTTGGCCAAC AAATAGTGAA AACTGCTTCT 1080 1081 GATTATGGAG AAAGCAGCAG TTCTTATACA CCTCGAATAC AGTCTGATGT TGTTCTTCCA 1140 1141 CCACCTCAGA AATTTGCCTC AACTGATAGT CGGGTCAAAG AGAGGTTATT TTTGGTCTTC 1200 1201 AACCCAGCCC CTTTGCCTTT AGACATATTA GAGGATGTTT TCTGTCGTTT TGGGTATTTA 1260 1261 ATAGAAGTGT ACCTGGTGCC TGGAAGGAAT GTAGGATATG CTAAATTTGC CAATAGAACA 1320 1321 AGTGCCAATG ATGCCATCAC AGCTATACAT GGAAAGGTTA TTAATGGAGT AAAACTTAAA 1380 1381 GTGATGTTGG CTGATCCTCC AAAAGAAGAG TCTTACAAAA GACAGAGAAC CCATTAA 1437 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Caj-0976 | Callithrix jacchus | 70.0 | 1e-69 | 233 |
LLPS-Urm-2802 | Ursus maritimus | 69.38 | 0.0 | 647 |
LLPS-Sus-3514 | Sus scrofa | 69.1 | 0.0 | 664 |
LLPS-Eqc-4133 | Equus caballus | 69.1 | 0.0 | 662 |
LLPS-Nol-0866 | Nomascus leucogenys | 69.1 | 0.0 | 660 |
LLPS-Fec-4311 | Felis catus | 69.1 | 0.0 | 661 |
LLPS-Mup-3139 | Mustela putorius furo | 68.89 | 0.0 | 660 |
LLPS-Cas-3919 | Carlito syrichta | 68.89 | 0.0 | 660 |
LLPS-Aim-2453 | Ailuropoda melanoleuca | 68.81 | 0.0 | 662 |
LLPS-Paa-2827 | Papio anubis | 68.68 | 0.0 | 660 |
LLPS-Aon-4308 | Aotus nancymaae | 68.68 | 0.0 | 659 |
LLPS-Chs-0778 | Chlorocebus sabaeus | 68.68 | 0.0 | 660 |
LLPS-Maf-2706 | Macaca fascicularis | 68.68 | 0.0 | 660 |
LLPS-Gog-4502 | Gorilla gorilla | 68.68 | 0.0 | 660 |
LLPS-Mam-3333 | Macaca mulatta | 68.68 | 0.0 | 660 |
LLPS-Poa-3631 | Pongo abelii | 68.68 | 0.0 | 660 |
LLPS-Man-4287 | Macaca nemestrina | 68.68 | 0.0 | 660 |
LLPS-Pat-4578 | Pan troglodytes | 68.68 | 0.0 | 660 |
LLPS-Scf-2345 | Scleropages formosus | 68.62 | 0.0 | 677 |
LLPS-Mod-1957 | Monodelphis domestica | 68.62 | 0.0 | 659 |
LLPS-Bot-4376 | Bos taurus | 68.48 | 0.0 | 656 |
LLPS-Rhb-3028 | Rhinopithecus bieti | 68.48 | 0.0 | 658 |
LLPS-Orc-3292 | Oryctolagus cuniculus | 68.48 | 0.0 | 658 |
LLPS-Otg-0632 | Otolemur garnettii | 68.48 | 0.0 | 651 |
LLPS-Cea-1048 | Cercocebus atys | 68.4 | 0.0 | 659 |
LLPS-Pap-4170 | Pan paniscus | 68.4 | 0.0 | 659 |
LLPS-Hos-2305 | Homo sapiens | 68.4 | 0.0 | 659 |
LLPS-Dio-4211 | Dipodomys ordii | 68.06 | 0.0 | 652 |
LLPS-Ict-3172 | Ictidomys tridecemlineatus | 68.06 | 0.0 | 653 |
LLPS-Caf-1886 | Canis familiaris | 67.91 | 0.0 | 658 |
LLPS-Fud-3651 | Fukomys damarensis | 67.86 | 0.0 | 642 |
LLPS-Leo-3949 | Lepisosteus oculatus | 67.77 | 0.0 | 687 |
LLPS-Cap-1234 | Cavia porcellus | 67.71 | 0.0 | 652 |
LLPS-Mal-3889 | Mandrillus leucophaeus | 67.36 | 0.0 | 649 |
LLPS-Mum-4212 | Mus musculus | 67.36 | 0.0 | 640 |
LLPS-Ova-3849 | Ovis aries | 67.15 | 0.0 | 637 |
LLPS-Ran-1725 | Rattus norvegicus | 66.74 | 0.0 | 643 |
LLPS-Loa-1986 | Loxodonta africana | 66.67 | 3e-179 | 515 |
LLPS-Sah-0694 | Sarcophilus harrisii | 66.15 | 9e-178 | 511 |
LLPS-Icp-3782 | Ictalurus punctatus | 65.88 | 0.0 | 647 |
LLPS-Ora-2009 | Ornithorhynchus anatinus | 65.73 | 4e-174 | 501 |
LLPS-Mea-3940 | Mesocricetus auratus | 65.51 | 0.0 | 633 |
LLPS-Asm-0164 | Astyanax mexicanus | 64.41 | 0.0 | 619 |
LLPS-Tag-2520 | Taeniopygia guttata | 64.1 | 3e-94 | 291 |
LLPS-Ere-1046 | Erinaceus europaeus | 63.53 | 1e-107 | 327 |
LLPS-Dar-1379 | Danio rerio | 63.09 | 0.0 | 606 |
LLPS-Gaga-3835 | Gallus gallus | 62.03 | 0.0 | 587 |
LLPS-Anp-3359 | Anas platyrhynchos | 61.92 | 2e-161 | 469 |
LLPS-Meg-0795 | Meleagris gallopavo | 61.6 | 3e-156 | 456 |
LLPS-Orl-2851 | Oryzias latipes | 61.15 | 0.0 | 574 |
LLPS-Tar-0271 | Takifugu rubripes | 60.93 | 0.0 | 563 |
LLPS-Fia-0772 | Ficedula albicollis | 60.93 | 2e-153 | 449 |
LLPS-Pes-1993 | Pelodiscus sinensis | 60.88 | 3e-145 | 427 |
LLPS-Orn-2413 | Oreochromis niloticus | 60.81 | 0.0 | 576 |
LLPS-Xet-2727 | Xenopus tropicalis | 60.68 | 0.0 | 590 |
LLPS-Scm-1806 | Scophthalmus maximus | 58.94 | 5e-171 | 496 |
LLPS-Xim-1237 | Xiphophorus maculatus | 58.09 | 0.0 | 563 |
LLPS-Pof-3610 | Poecilia formosa | 58.09 | 0.0 | 561 |
LLPS-Gaa-1870 | Gasterosteus aculeatus | 57.03 | 0.0 | 552 |
LLPS-Ten-0513 | Tetraodon nigroviridis | 56.67 | 0.0 | 530 |
LLPS-Myl-1332 | Myotis lucifugus | 56.06 | 8e-175 | 507 |
LLPS-Anc-1107 | Anolis carolinensis | 44.4 | 2e-65 | 219 |
LLPS-Drm-2033 | Drosophila melanogaster | 38.25 | 2e-94 | 300 |
LLPS-Cae-1561 | Caenorhabditis elegans | 34.72 | 2e-13 | 76.3 |
LLPS-Cii-1807 | Ciona intestinalis | 33.56 | 9e-15 | 80.5 |
LLPS-Tut-2176 | Tursiops truncatus | 31.39 | 9e-12 | 71.2 |
LLPS-Sem-1280 | Selaginella moellendorffii | 30.13 | 7e-12 | 71.2 |
LLPS-Cis-1223 | Ciona savignyi | 29.82 | 2e-12 | 72.8 |
LLPS-Phv-0912 | Phaseolus vulgaris | 29.53 | 3e-13 | 75.9 |
LLPS-Hea-1659 | Helianthus annuus | 28.87 | 8e-07 | 55.8 |
LLPS-Mua-0353 | Musa acuminata | 28.48 | 5e-09 | 62.8 |
LLPS-Php-0547 | Physcomitrella patens | 27.78 | 3e-07 | 57.0 |
LLPS-Coc-1556 | Corchorus capsularis | 27.68 | 9e-09 | 62.0 |
LLPS-Mae-2664 | Manihot esculenta | 26.67 | 3e-07 | 57.0 |
LLPS-Brn-0839 | Brassica napus | 26.15 | 1e-15 | 83.6 |
LLPS-Bro-1641 | Brassica oleracea | 26.15 | 1e-15 | 83.6 |
LLPS-Chr-1579 | Chlamydomonas reinhardtii | 25.25 | 2e-23 | 107 |
LLPS-Arl-2034 | Arabidopsis lyrata | 25.09 | 1e-13 | 77.8 |
LLPS-Brd-0047 | Brachypodium distachyon | 24.91 | 6e-13 | 75.1 |
LLPS-Art-2631 | Arabidopsis thaliana | 24.74 | 2e-12 | 73.6 |
LLPS-Brr-2317 | Brassica rapa | 24.56 | 2e-12 | 73.6 |
LLPS-Tra-1166 | Triticum aestivum | 24.2 | 4e-12 | 72.8 |
LLPS-Dac-0735 | Daucus carota | 23.4 | 5e-12 | 72.4 |
LLPS-Hov-0058 | Hordeum vulgare | 23.38 | 1e-12 | 74.7 |
LLPS-Tru-0204 | Triticum urartu | 23.38 | 2e-12 | 73.9 |