LLPS-Kop-0492
PAS_chr1-1_0345
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Protein component of the large (60S) ribosomal subunit |
| Gene Name: | PAS_chr1-1_0345 |
| Ensembl Gene: | PAS_chr1-1_0345 |
| Ensembl Protein: | CAY67721 |
| Organism: | Komagataella pastoris |
| Taxa ID: | 644223 |
| LLPS Type: | Scaffold |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Droplet, Nuclear speckle, Nucleolus, P-body, Stress granule, Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | CAY67721 | CAY67721 |
| UniProt | C4QWU8, C4QWU8_KOMPG | |
| GeneBank | FN392319 | CAY67721.1 |
| RefSeq | XM_002489957.1 | XP_002490002.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MPFQKIQKTA AYHSRYQTPF RRRREGKTDY YQRKRLVTQH KNKYGSPKYR LVVRFTHKDI 60 61 ICQIISSTLT GDVVFTSAYS HELPRYGIEH GLTNWSAAYA TGLLVARRAL QKLKLDETYK 120 121 GVEEVEGEFE LTEAVEDGPR PFKVFLDVGL QRTTTGARVF GALKGASDGG LYIPHSPNRF 180 181 PGWDIEGEEL DAELLRKYIF GGHVAEYMEE LADDDEEKFR QLFKGYLADD IEADAIEDIY 240 241 LAAHEAIRED PSFKPTEKKY TKEQYAAVSK KYRQVKLTKE ERQAKIAAKI ASFKAEN 297 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCCTTTCC AAAAGATCCA GAAGACTGCT GCTTACCACT CTCGTTACCA GACTCCCTTC 60 61 AGAAGAAGAA GAGAGGGTAA GACCGACTAC TACCAAAGAA AGAGATTGGT CACTCAACAC 120 121 AAGAACAAGT ACGGTTCTCC AAAGTACAGA TTGGTCGTTA GATTTACCCA CAAGGACATC 180 181 ATCTGCCAAA TCATCTCTTC CACTTTGACT GGTGATGTTG TGTTCACCTC CGCTTACTCC 240 241 CACGAGTTGC CAAGATACGG AATTGAGCAC GGTCTGACCA ACTGGTCCGC TGCCTACGCT 300 301 ACCGGTCTTT TGGTTGCCAG AAGAGCCTTG CAAAAACTCA AGTTGGACGA GACCTATAAG 360 361 GGTGTTGAAG AGGTCGAGGG TGAGTTCGAG CTCACTGAGG CTGTTGAGGA TGGCCCAAGA 420 421 CCATTCAAGG TTTTCTTGGA TGTTGGTTTG CAAAGAACTA CCACCGGTGC CAGGGTCTTT 480 481 GGTGCTTTGA AGGGTGCCTC CGACGGTGGT TTGTACATTC CTCACTCTCC TAACAGATTC 540 541 CCAGGTTGGG ACATTGAAGG TGAAGAACTT GATGCTGAGT TATTGAGAAA GTACATCTTC 600 601 GGTGGTCACG TCGCTGAGTA CATGGAGGAG TTGGCTGACG ACGATGAAGA GAAGTTCAGA 660 661 CAATTGTTCA AGGGATACTT GGCTGATGAC ATCGAGGCTG ACGCTATTGA AGACATCTAC 720 721 TTGGCTGCTC ACGAGGCTAT CAGAGAGGAC CCATCTTTCA AGCCAACTGA GAAGAAGTAC 780 781 ACCAAGGAAC AATATGCTGC TGTGTCCAAG AAGTACAGAC AAGTTAAGCT TACCAAAGAG 840 841 GAGAGACAAG CTAAGATCGC CGCCAAGATC GCTTCTTTCA AGGCTGAGAA CTAA 894 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sac-1185 | Saccharomyces cerevisiae | 84.04 | 7e-152 | 434 |
| LLPS-Asg-0230 | Ashbya gossypii | 82.69 | 5e-151 | 432 |
| LLPS-Yal-0227 | Yarrowia lipolytica | 78.44 | 3e-133 | 387 |
| LLPS-Zyt-0801 | Zymoseptoria tritici | 69.2 | 3e-119 | 352 |
| LLPS-Scp-0460 | Schizosaccharomyces pombe | 67.49 | 8e-114 | 337 |
| LLPS-Scj-0168 | Schizosaccharomyces japonicus | 67.14 | 7e-113 | 335 |
| LLPS-Lem-0380 | Leptosphaeria maculans | 67.13 | 4e-117 | 347 |
| LLPS-Pytr-0100 | Pyrenophora triticirepentis | 66.78 | 4e-117 | 346 |
| LLPS-Nef-0656 | Neosartorya fischeri | 66.78 | 6e-118 | 351 |
| LLPS-Miv-0357 | Microbotryum violaceum | 66.43 | 8e-110 | 328 |
| LLPS-Fuo-0563 | Fusarium oxysporum | 66.3 | 6e-112 | 333 |
| LLPS-Mao-0464 | Magnaporthe oryzae | 66.28 | 2e-107 | 322 |
| LLPS-Fuv-0877 | Fusarium verticillioides | 66.18 | 5e-113 | 336 |
| LLPS-Fus-0402 | Fusarium solani | 66.09 | 4e-119 | 351 |
| LLPS-Asc-0006 | Aspergillus clavatus | 66.09 | 3e-117 | 346 |
| LLPS-Asni-0005 | Aspergillus niger | 66.09 | 2e-117 | 347 |
| LLPS-Blg-0888 | Blumeria graminis | 66.08 | 7e-116 | 343 |
| LLPS-Trr-1143 | Trichoderma reesei | 65.97 | 1e-116 | 345 |
| LLPS-Pyt-0049 | Pyrenophora teres | 65.97 | 2e-116 | 345 |
| LLPS-Mel-0114 | Melampsora laricipopulina | 65.96 | 2e-115 | 342 |
| LLPS-Ast-0161 | Aspergillus terreus | 65.74 | 4e-116 | 344 |
| LLPS-Dos-0951 | Dothistroma septosporum | 65.62 | 4e-113 | 336 |
| LLPS-Asn-0517 | Aspergillus nidulans | 65.62 | 9e-116 | 343 |
| LLPS-Nec-1363 | Neurospora crassa | 65.56 | 3e-120 | 354 |
| LLPS-Aso-0049 | Aspergillus oryzae | 65.4 | 6e-114 | 338 |
| LLPS-Asf-0431 | Aspergillus flavus | 65.4 | 6e-114 | 338 |
| LLPS-Scs-0504 | Sclerotinia sclerotiorum | 65.14 | 4e-116 | 343 |
| LLPS-Put-0486 | Puccinia triticina | 65.08 | 5e-120 | 353 |
| LLPS-Asfu-0486 | Aspergillus fumigatus | 65.07 | 6e-108 | 323 |
| LLPS-Map-0266 | Magnaporthe poae | 65.05 | 2e-107 | 321 |
| LLPS-Trv-0486 | Trichoderma virens | 64.81 | 1e-115 | 342 |
| LLPS-Gag-0184 | Gaeumannomyces graminis | 64.71 | 1e-108 | 325 |
| LLPS-Phn-1047 | Phaeosphaeria nodorum | 64.5 | 9e-79 | 246 |
| LLPS-Beb-0053 | Beauveria bassiana | 64.36 | 2e-115 | 342 |
| LLPS-Pug-0084 | Puccinia graminis | 64.31 | 4e-116 | 347 |
| LLPS-Scc-0452 | Schizosaccharomyces cryophilus | 64.31 | 2e-110 | 328 |
| LLPS-Crn-0686 | Cryptococcus neoformans | 63.85 | 9e-112 | 333 |
| LLPS-Ved-0350 | Verticillium dahliae | 63.29 | 9e-115 | 340 |
| LLPS-Cog-0329 | Colletotrichum gloeosporioides | 63.29 | 6e-115 | 340 |
| LLPS-Abg-1511 | Absidia glauca | 62.93 | 1e-101 | 306 |
| LLPS-Cogr-0713 | Colletotrichum graminicola | 62.02 | 4e-108 | 323 |
| LLPS-Orm-0709 | Oryza meridionalis | 62.0 | 4e-11 | 63.9 |
| LLPS-Tum-0162 | Tuber melanosporum | 61.86 | 3e-109 | 329 |
| LLPS-Spr-0808 | Sporisorium reilianum | 61.49 | 4e-111 | 331 |
| LLPS-Coo-0196 | Colletotrichum orbiculare | 61.2 | 4e-116 | 343 |
| LLPS-Usm-0835 | Ustilago maydis | 61.15 | 1e-108 | 325 |
| LLPS-Hov-0554 | Hordeum vulgare | 58.02 | 3e-57 | 188 |
| LLPS-Vir-0056 | Vigna radiata | 57.3 | 1e-90 | 279 |
| LLPS-Xim-2082 | Xiphophorus maculatus | 57.01 | 5e-82 | 256 |
| LLPS-Icp-2533 | Ictalurus punctatus | 56.95 | 8e-85 | 264 |
| LLPS-Ora-2227 | Ornithorhynchus anatinus | 56.9 | 3e-18 | 81.6 |
| LLPS-Drm-1099 | Drosophila melanogaster | 56.89 | 9e-93 | 284 |
| LLPS-Via-0234 | Vigna angularis | 56.54 | 1e-95 | 291 |
| LLPS-Phv-1072 | Phaseolus vulgaris | 56.18 | 3e-96 | 293 |
| LLPS-Leo-1477 | Lepisosteus oculatus | 56.18 | 1e-87 | 273 |
| LLPS-Met-1167 | Medicago truncatula | 55.83 | 5e-94 | 287 |
| LLPS-Glm-1391 | Glycine max | 55.83 | 2e-95 | 290 |
| LLPS-Xet-1505 | Xenopus tropicalis | 55.78 | 5e-86 | 266 |
| LLPS-Lac-1296 | Latimeria chalumnae | 55.78 | 2e-86 | 268 |
| LLPS-Mal-2161 | Mandrillus leucophaeus | 55.61 | 3e-77 | 243 |
| LLPS-Brr-0527 | Brassica rapa | 55.16 | 5e-95 | 290 |
| LLPS-Brn-1120 | Brassica napus | 55.16 | 4e-95 | 290 |
| LLPS-Pot-2373 | Populus trichocarpa | 55.12 | 2e-93 | 285 |
| LLPS-Mae-0894 | Manihot esculenta | 55.12 | 2e-93 | 285 |
| LLPS-Meg-1922 | Meleagris gallopavo | 55.02 | 1e-84 | 263 |
| LLPS-Scf-1489 | Scleropages formosus | 55.02 | 7e-86 | 267 |
| LLPS-Gaga-0889 | Gallus gallus | 54.98 | 2e-85 | 265 |
| LLPS-Gaa-2102 | Gasterosteus aculeatus | 54.98 | 6e-85 | 264 |
| LLPS-Sol-0689 | Solanum lycopersicum | 54.77 | 4e-94 | 288 |
| LLPS-Tag-0392 | Taeniopygia guttata | 54.62 | 2e-84 | 263 |
| LLPS-Anp-0742 | Anas platyrhynchos | 54.62 | 8e-85 | 263 |
| LLPS-Ten-2142 | Tetraodon nigroviridis | 54.58 | 2e-85 | 265 |
| LLPS-Anc-1791 | Anolis carolinensis | 54.58 | 1e-85 | 266 |
| LLPS-Scm-1053 | Scophthalmus maximus | 54.58 | 4e-85 | 265 |
| LLPS-Gor-0029 | Gossypium raimondii | 54.42 | 2e-90 | 278 |
| LLPS-Viv-0143 | Vitis vinifera | 54.42 | 7e-90 | 276 |
| LLPS-Chr-0299 | Chlamydomonas reinhardtii | 54.42 | 3e-81 | 254 |
| LLPS-Php-1478 | Physcomitrella patens | 54.42 | 5e-90 | 277 |
| LLPS-Dar-1533 | Danio rerio | 54.18 | 4e-87 | 269 |
| LLPS-Orn-1935 | Oreochromis niloticus | 54.18 | 2e-85 | 265 |
| LLPS-Fia-2481 | Ficedula albicollis | 54.18 | 3e-84 | 263 |
| LLPS-Asm-1183 | Astyanax mexicanus | 54.18 | 1e-85 | 266 |
| LLPS-Cas-2811 | Carlito syrichta | 54.15 | 1e-85 | 265 |
| LLPS-Tar-2588 | Takifugu rubripes | 54.1 | 5e-82 | 256 |
| LLPS-Zem-0447 | Zea mays | 54.09 | 1e-87 | 271 |
| LLPS-Sob-0638 | Sorghum bicolor | 54.09 | 7e-89 | 274 |
| LLPS-Nia-1014 | Nicotiana attenuata | 54.06 | 7e-94 | 288 |
| LLPS-Sot-1786 | Solanum tuberosum | 54.06 | 5e-93 | 285 |
| LLPS-Cus-0038 | Cucumis sativus | 54.06 | 4e-89 | 275 |
| LLPS-Amt-0710 | Amborella trichopoda | 53.85 | 4e-82 | 256 |
| LLPS-Aon-1895 | Aotus nancymaae | 53.75 | 9e-81 | 253 |
| LLPS-Caj-1931 | Callithrix jacchus | 53.75 | 9e-81 | 253 |
| LLPS-Tru-1231 | Triticum urartu | 53.74 | 3e-83 | 259 |
| LLPS-Orbr-1765 | Oryza brachyantha | 53.74 | 9e-88 | 271 |
| LLPS-Chc-0259 | Chondrus crispus | 53.71 | 4e-85 | 264 |
| LLPS-Arl-0431 | Arabidopsis lyrata | 53.71 | 5e-91 | 280 |
| LLPS-Mua-0914 | Musa acuminata | 53.71 | 9e-88 | 273 |
| LLPS-Cae-0211 | Caenorhabditis elegans | 53.6 | 1e-79 | 250 |
| LLPS-Cii-0486 | Ciona intestinalis | 53.52 | 9e-91 | 279 |
| LLPS-Caf-1241 | Canis familiaris | 53.39 | 7e-79 | 248 |
| LLPS-Orc-1514 | Oryctolagus cuniculus | 53.39 | 6e-79 | 248 |
| LLPS-Dio-2949 | Dipodomys ordii | 53.39 | 6e-79 | 248 |
| LLPS-Myl-3206 | Myotis lucifugus | 53.39 | 3e-78 | 246 |
| LLPS-Sah-1565 | Sarcophilus harrisii | 53.39 | 4e-78 | 246 |
| LLPS-Tra-0622 | Triticum aestivum | 53.38 | 3e-87 | 270 |
| LLPS-Sei-0697 | Setaria italica | 53.38 | 1e-86 | 268 |
| LLPS-Eqc-1658 | Equus caballus | 53.36 | 1e-79 | 250 |
| LLPS-Cap-2437 | Cavia porcellus | 53.36 | 2e-79 | 250 |
| LLPS-Poa-0504 | Pongo abelii | 53.36 | 2e-79 | 250 |
| LLPS-Nol-2661 | Nomascus leucogenys | 53.36 | 2e-79 | 250 |
| LLPS-Bro-0171 | Brassica oleracea | 53.36 | 4e-90 | 277 |
| LLPS-Art-0601 | Arabidopsis thaliana | 53.36 | 1e-90 | 278 |
| LLPS-Mod-0715 | Monodelphis domestica | 53.36 | 1e-78 | 248 |
| LLPS-Pap-0232 | Pan paniscus | 53.36 | 2e-79 | 250 |
| LLPS-Hos-1888 | Homo sapiens | 53.36 | 2e-79 | 250 |
| LLPS-Paa-0339 | Papio anubis | 53.36 | 2e-79 | 250 |
| LLPS-Brd-0710 | Brachypodium distachyon | 53.36 | 2e-88 | 273 |
| LLPS-Gas-0701 | Galdieria sulphuraria | 53.36 | 5e-80 | 251 |
| LLPS-Ran-1562 | Rattus norvegicus | 53.36 | 1e-74 | 238 |
| LLPS-Cea-1473 | Cercocebus atys | 53.36 | 2e-79 | 250 |
| LLPS-Sus-1496 | Sus scrofa | 53.36 | 2e-79 | 250 |
| LLPS-Maf-1163 | Macaca fascicularis | 53.36 | 2e-79 | 250 |
| LLPS-Mum-0152 | Mus musculus | 53.36 | 1e-74 | 238 |
| LLPS-Loa-2090 | Loxodonta africana | 53.17 | 6e-79 | 248 |
| LLPS-Ova-0258 | Ovis aries | 53.17 | 1e-76 | 243 |
| LLPS-Ors-0809 | Oryza sativa | 53.02 | 6e-86 | 266 |
| LLPS-Ori-1853 | Oryza indica | 53.02 | 9e-87 | 269 |
| LLPS-Tut-2032 | Tursiops truncatus | 52.96 | 1e-76 | 243 |
| LLPS-Aim-1857 | Ailuropoda melanoleuca | 52.96 | 2e-77 | 245 |
| LLPS-Mea-0606 | Mesocricetus auratus | 52.96 | 2e-73 | 234 |
| LLPS-Man-1840 | Macaca nemestrina | 52.91 | 9e-70 | 224 |
| LLPS-Fec-0970 | Felis catus | 52.84 | 2e-67 | 221 |
| LLPS-Urm-0857 | Ursus maritimus | 52.84 | 2e-67 | 221 |
| LLPS-Mam-1717 | Macaca mulatta | 52.78 | 3e-76 | 241 |
| LLPS-Pat-0203 | Pan troglodytes | 52.78 | 8e-76 | 241 |
| LLPS-Gog-2301 | Gorilla gorilla | 52.78 | 8e-76 | 241 |
| LLPS-Rhb-1002 | Rhinopithecus bieti | 52.67 | 2e-80 | 252 |
| LLPS-Hea-2629 | Helianthus annuus | 52.65 | 5e-90 | 277 |
| LLPS-Bot-0219 | Bos taurus | 52.57 | 4e-77 | 244 |
| LLPS-Mup-0912 | Mustela putorius furo | 52.57 | 4e-78 | 246 |
| LLPS-Fud-0603 | Fukomys damarensis | 52.57 | 4e-78 | 246 |
| LLPS-Osl-0137 | Ostreococcus lucimarinus | 52.4 | 7e-80 | 251 |
| LLPS-Cis-0619 | Ciona savignyi | 52.38 | 2e-83 | 259 |
| LLPS-Chs-0042 | Chlorocebus sabaeus | 52.17 | 5e-83 | 259 |
| LLPS-Sem-2012 | Selaginella moellendorffii | 51.94 | 2e-86 | 267 |
| LLPS-Prp-0368 | Prunus persica | 51.86 | 4e-90 | 277 |
| LLPS-Orl-3004 | Oryzias latipes | 51.85 | 4e-83 | 260 |
| LLPS-Pes-0625 | Pelodiscus sinensis | 51.74 | 3e-58 | 193 |
| LLPS-Thc-0123 | Theobroma cacao | 51.59 | 8e-86 | 268 |
| LLPS-Cym-0758 | Cyanidioschyzon merolae | 51.41 | 9e-77 | 243 |
| LLPS-Otg-0319 | Otolemur garnettii | 51.39 | 4e-80 | 251 |
| LLPS-Coc-0065 | Corchorus capsularis | 51.24 | 1e-86 | 268 |
| LLPS-Ict-1126 | Ictidomys tridecemlineatus | 50.59 | 5e-71 | 228 |
| LLPS-Pof-1289 | Poecilia formosa | 50.51 | 5e-85 | 264 |
| LLPS-Org-0460 | Oryza glaberrima | 48.65 | 2e-36 | 136 |
| LLPS-Dac-0361 | Daucus carota | 46.64 | 7e-72 | 229 |
| LLPS-Lep-0337 | Leersia perrieri | 46.22 | 1e-17 | 82.0 |
| LLPS-Ere-0355 | Erinaceus europaeus | 37.36 | 8e-30 | 119 |